Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0008601 Sechium edule HOM05D004143 ORTHO05D004816 1.3e-271 939.1 463 100.0
CsaV3_4G009010 Cucumis sativus L. HOM05D004143 ORTHO05D004816 3.8e-223 778.1 454 82.4
MELO3C018981.2 Cucumis melo HOM05D004143 ORTHO05D004816 5.5e-222 774.2 456 82.0
ClCG10G008670 Citrullus lanatus HOM05D004143 ORTHO05D004816 1.6e-221 772.7 448 83.3
CsaV3_4G009000 Cucumis sativus L. HOM05D004143 ORTHO05D004816 2.7e-221 771.9 442 84.2
MELO3C018979.2 Cucumis melo HOM05D004143 ORTHO05D004816 5.1e-220 767.7 455 82.2
Sed0000759 Sechium edule HOM05D004143 ORTHO05D004816 1.2e-216 756.5 444 83.3
TAR375G1015 Trochodendron aralioides HOM05D004143 ORTHO05D004816 6.1e-213 744.2 451 79.2
PGR142G3661 Punica granatum HOM05D004143 ORTHO05D004816 3.7e-210 734.9 441 78.9
TAR629G3485 Trochodendron aralioides HOM05D004143 ORTHO05D004816 8.2e-210 733.8 451 77.8
CSS0027564 Camellia sinensis var. sinensis HOM05D004143 ORTHO05D004816 6.9e-209 730.7 453 77.3
Potri.012G005100 Populus trichocarpa HOM05D004143 ORTHO05D004816 7.7e-208 727.2 460 77.2
Sabra12G0000800 Salix brachista HOM05D004143 ORTHO05D004816 1.0e-207 726.9 460 77.4
Sabra12G0007100 Salix brachista HOM05D004143 ORTHO05D004816 5.0e-207 724.5 460 77.0
Sabra15G0000900 Salix brachista HOM05D004143 ORTHO05D004816 1.9e-206 722.6 453 77.0
CANSAT11G0263 Cannabis sativa HOM05D004143 ORTHO05D004816 7.9e-205 717.2 462 75.1
CANSAT01G3090 Cannabis sativa HOM05D004143 ORTHO05D004816 1.0e-204 716.8 448 77.5
Manes.01G045000 Manihot esculenta HOM05D004143 ORTHO05D004816 2.3e-204 715.7 463 75.6
Hund09750 Selenicereus undatus HOM05D004143 ORTHO05D004816 2.3e-204 715.7 447 75.8
TAR629G1812 Trochodendron aralioides HOM05D004143 ORTHO05D004816 5.1e-204 714.5 442 77.4
Thecc.05G121800 Theobroma cacao HOM05D004143 ORTHO05D004816 1.1e-203 713.4 457 75.7
Dinv17282 Davidia involucrata HOM05D004143 ORTHO05D004816 2.0e-203 712.6 467 74.9
Actinidia08713 Actinidia chinensis HOM05D004143 ORTHO05D004816 3.3e-203 711.8 463 74.5
Prupe.2G321300 Prunus persica HOM05D004143 ORTHO05D004816 3.3e-203 711.8 442 78.1
TWI23G0162 Tripterygium wilfordii HOM05D004143 ORTHO05D004816 5.7e-203 711.1 465 73.3
Lj3A892T30 Lonicera japonica HOM05D004143 ORTHO05D004816 1.3e-202 709.9 451 74.9
COL.COLO4_04975 Corchorus olitorius HOM05D004143 ORTHO05D004816 1.7e-202 709.5 457 75.7
GSVIVG01038674001 Vitis vinifera HOM05D004143 ORTHO05D004816 2.2e-202 709.1 441 77.6
TWI23G0209 Tripterygium wilfordii HOM05D004143 ORTHO05D004816 2.8e-202 708.8 454 74.9
vmacro06470 Vaccinium macrocarpon HOM05D004143 ORTHO05D004816 3.7e-202 708.4 440 77.3
Rhsim03G0218000 Rhododendron simsii HOM05D004143 ORTHO05D004816 6.3e-202 707.6 442 76.0
Atru.chr12.2532 Acer truncatum HOM05D004143 ORTHO05D004816 8.2e-202 707.2 430 79.5
Atru.chr12.2510 Acer truncatum HOM05D004143 ORTHO05D004816 1.1e-201 706.8 428 79.9
Hma1.2p1_0115F.1_g055680 Hydrangea macrophylla HOM05D004143 ORTHO05D004816 1.1e-201 706.8 451 74.9
Haze_00327 Corylus avellana HOM05D004143 ORTHO05D004816 1.4e-201 706.4 458 74.7
MD01G1230900 Malus domestica HOM05D004143 ORTHO05D004816 1.4e-201 706.4 436 77.8
MD07G1302200 Malus domestica HOM05D004143 ORTHO05D004816 3.1e-201 705.3 441 76.4
Cpa.g.sc3.179 Carica papaya HOM05D004143 ORTHO05D004816 4.1e-201 704.9 439 77.0
EL10Ac3g05140 Beta vulgaris HOM05D004143 ORTHO05D004816 5.3e-201 704.5 443 76.1
Ciclev10024344m.g Citrus clementina HOM05D004143 ORTHO05D004816 9.1e-201 703.7 431 78.2
vmacro06469 Vaccinium macrocarpon HOM05D004143 ORTHO05D004816 1.2e-200 703.4 443 76.1
Gohir.A13G001800 Gossypium hirsutum HOM05D004143 ORTHO05D004816 1.5e-200 703.0 460 75.4
Cfa016134 Carpinus fangiana HOM05D004143 ORTHO05D004816 2.0e-200 702.6 458 74.5
Gohir.D13G001200 Gossypium hirsutum HOM05D004143 ORTHO05D004816 4.5e-200 701.4 459 75.2
Gorai.013G001100 Gossypium raimondii HOM05D004143 ORTHO05D004816 4.5e-200 701.4 459 75.2
Actinidia34284 Actinidia chinensis HOM05D004143 ORTHO05D004816 7.7e-200 700.7 458 73.8
Ciclev10019944m.g Citrus clementina HOM05D004143 ORTHO05D004816 1.0e-199 700.3 444 75.5
arahy.Tifrunner.gnm1.ann1.JUEJ49 Arachis hypogaea HOM05D004143 ORTHO05D004816 2.2e-199 699.1 439 75.4
arahy.Tifrunner.gnm1.ann1.QS6CEN Arachis hypogaea HOM05D004143 ORTHO05D004816 2.9e-199 698.7 439 75.2
arahy.Tifrunner.gnm1.ann1.XXMI3I Arachis hypogaea HOM05D004143 ORTHO05D004816 3.8e-199 698.4 439 75.4
Duzib138G0998 Durio zibethinus HOM05D004143 ORTHO05D004816 3.8e-199 698.4 462 73.8
Rhsim03G0217900 Rhododendron simsii HOM05D004143 ORTHO05D004816 6.5e-199 697.6 451 74.5
Thecc.01G329300 Theobroma cacao HOM05D004143 ORTHO05D004816 6.5e-199 697.6 449 73.9
PSO063G4813 Papaver somniferum HOM05D004143 ORTHO05D004816 1.9e-198 696.0 452 73.7
ClCG10G008690 Citrullus lanatus HOM05D004143 ORTHO05D004816 3.2e-198 695.3 409 82.2
DCAR_010563 Daucus carota HOM05D004143 ORTHO05D004816 5.5e-198 694.5 424 79.0
RcHm_v2.0_Chr1g0383221 Rosa chinensis HOM05D004143 ORTHO05D004816 7.2e-198 694.1 435 76.6
Sc19g0000410 Simmondsia chinensis HOM05D004143 ORTHO05D004816 7.2e-198 694.1 438 76.7
FvH4_7g33150 Fragaria vesca HOM05D004143 ORTHO05D004816 4.7e-197 691.4 443 75.4
QL09p006127 Quercus lobata HOM05D004143 ORTHO05D004816 4.7e-197 691.4 483 70.6
FAN10G3640 Fragaria x ananassa HOM05D004143 ORTHO05D004816 6.1e-197 691.0 439 76.1
FAN10G4294 Fragaria x ananassa HOM05D004143 ORTHO05D004816 6.1e-197 691.0 439 76.1
PSO782G2863 Papaver somniferum HOM05D004143 ORTHO05D004816 6.1e-197 691.0 452 72.8
CiPaw.05G208300 Carya illinoinensis HOM05D004143 ORTHO05D004816 8.0e-197 690.6 453 73.3
MD01G1230800 Malus domestica HOM05D004143 ORTHO05D004816 8.0e-197 690.6 436 76.1
FvH4_7g33230 Fragaria vesca HOM05D004143 ORTHO05D004816 8.8e-196 687.2 439 75.9
DCAR_014598 Daucus carota HOM05D004143 ORTHO05D004816 5.7e-195 684.5 449 74.8
FAN03G2936 Fragaria x ananassa HOM05D004143 ORTHO05D004816 5.7e-195 684.5 439 75.2
FAN03G3145 Fragaria x ananassa HOM05D004143 ORTHO05D004816 5.7e-195 684.5 439 75.2
Lsat_1_v5_gn_2_3341 Lactuca sativa HOM05D004143 ORTHO05D004816 9.7e-195 683.7 445 74.6
Actinidia18690 Actinidia chinensis HOM05D004143 ORTHO05D004816 1.7e-194 682.9 465 71.8
Oeu017360.1 Olea europaea HOM05D004143 ORTHO05D004816 2.8e-194 682.2 445 75.1
MSTRG.23 Avicennia marina HOM05D004143 ORTHO05D004816 4.8e-194 681.4 446 73.1
MD01G1230700 Malus domestica HOM05D004143 ORTHO05D004816 4.8e-194 681.4 441 74.4
Cfa016133 Carpinus fangiana HOM05D004143 ORTHO05D004816 6.3e-194 681.0 458 72.3
Ah.13g070980 Amaranthus hybridus HOM05D004143 ORTHO05D004816 8.2e-194 680.6 456 72.6
THA.LOC104814953 Tarenaya hassleriana HOM05D004143 ORTHO05D004816 4.1e-193 678.3 447 74.0
HPP92_015066 Vanilla planifolia HOM05D004143 ORTHO05D004816 5.3e-193 677.9 439 72.9
FAN01G2649 Fragaria x ananassa HOM05D004143 ORTHO05D004816 1.2e-192 676.8 437 75.3
Glyma.04G226100 Glycine max HOM05D004143 ORTHO05D004816 1.2e-192 676.8 464 71.6
Eucgr.K00891 Eucalyptus grandis HOM05D004143 ORTHO05D004816 1.6e-192 676.4 436 74.8
arahy.Tifrunner.gnm1.ann1.YIM4MN Arachis hypogaea HOM05D004143 ORTHO05D004816 2.2e-191 672.5 462 71.4
Cc02_g00660 Coffea canephora HOM05D004143 ORTHO05D004816 2.2e-191 672.5 434 74.0
Thhalv10007558m.g Eutrema salsugineum HOM05D004143 ORTHO05D004816 3.8e-191 671.8 442 73.1
arahy.Tifrunner.gnm1.ann1.RI5PYK Arachis hypogaea HOM05D004143 ORTHO05D004816 5.0e-191 671.4 463 71.3
DCAR_020387 Daucus carota HOM05D004143 ORTHO05D004816 6.5e-191 671.0 430 73.0
Lj1g0023378 Lotus japonicus HOM05D004143 ORTHO05D004816 5.5e-190 667.9 463 70.6
HanXRQChr08g0225831 Helianthus annuus HOM05D004143 ORTHO05D004816 7.2e-190 667.5 446 71.3
CARHR018600 Cardamine hirsuta HOM05D004143 ORTHO05D004816 1.6e-189 666.4 430 74.4
Ca_16836_v3 Cicer arietinum L. HOM05D004143 ORTHO05D004816 1.6e-189 666.4 464 70.9
Migut.F00972 Erythranthe guttata HOM05D004143 ORTHO05D004816 1.6e-189 666.4 444 72.3
Sp1g16050 Schrenkiella parvula HOM05D004143 ORTHO05D004816 1.6e-189 666.4 449 71.7
Sopen03g021740 Solanum pennellii HOM05D004143 ORTHO05D004816 1.6e-189 666.4 450 72.0
VMungo1309G1903 Vigna mungo HOM05D004143 ORTHO05D004816 2.7e-189 665.6 462 71.2
Carub.0001s1769 Capsella rubella HOM05D004143 ORTHO05D004816 3.6e-189 665.2 457 71.1
Glyma.02G221600 Glycine max HOM05D004143 ORTHO05D004816 3.6e-189 665.2 444 73.6
Nitab4.5_0004582g0010 Nicotiana tabacum HOM05D004143 ORTHO05D004816 3.6e-189 665.2 459 70.8
Phvul.009G039900 Phaseolus vulgaris HOM05D004143 ORTHO05D004816 3.6e-189 665.2 459 70.4
CAN.G303.51 Capsicum annuum HOM05D004143 ORTHO05D004816 8.0e-189 664.1 454 71.1
AT1G18000 Arabidopsis thaliana HOM05D004143 ORTHO05D004816 1.0e-188 663.7 438 73.1
AT1G18010 Arabidopsis thaliana HOM05D004143 ORTHO05D004816 1.0e-188 663.7 438 73.1
Aa31LG7G3020 Aethionema arabicum HOM05D004143 ORTHO05D004816 2.3e-188 662.5 425 73.9
AL1G30350 Arabidopsis lyrata HOM05D004143 ORTHO05D004816 2.3e-188 662.5 432 73.4
Aqoxy5G04387 Aquilegia oxysepala HOM05D004143 ORTHO05D004816 3.0e-188 662.1 428 75.2
Nitab4.5_0000021g0150 Nicotiana tabacum HOM05D004143 ORTHO05D004816 3.0e-188 662.1 459 70.8
Glyma.06G138800 Glycine max HOM05D004143 ORTHO05D004816 4.0e-188 661.8 445 72.4
AUR62028110 Chenopodium quinoa HOM05D004143 ORTHO05D004816 5.2e-188 661.4 418 76.1
PGSC0003DMG400000551 Solanum tuberosum HOM05D004143 ORTHO05D004816 5.2e-188 661.4 453 71.1
Lj1g0001658 Lotus japonicus HOM05D004143 ORTHO05D004816 6.8e-188 661.0 447 72.7
Psat0s1240g0080 Pisum sativum HOM05D004143 ORTHO05D004816 6.8e-188 661.0 459 71.9
Medtr3g093270 Medicago truncatula HOM05D004143 ORTHO05D004816 1.2e-187 660.2 456 70.6
Oeu017361.2 Olea europaea HOM05D004143 ORTHO05D004816 1.2e-187 660.2 456 71.5
ATR0579G031 Amborella trichopoda HOM05D004143 ORTHO05D004816 2.0e-187 659.4 426 72.5
MBI04_g26128_MAGBIO Magnolia biondii HOM05D004143 ORTHO05D004816 3.4e-187 658.7 440 72.3
ClCG00G006070 Citrullus lanatus HOM05D004143 ORTHO05D004816 1.3e-186 656.8 364 86.0
A09p60140 Brassica napus HOM05D004143 ORTHO05D004816 1.7e-186 656.4 429 73.0
BraA09t41383Z Brassica rapa HOM05D004143 ORTHO05D004816 1.7e-186 656.4 429 73.0
CSS0024166 Camellia sinensis var. sinensis HOM05D004143 ORTHO05D004816 2.2e-186 656.0 462 69.3
AUR62005954 Chenopodium quinoa HOM05D004143 ORTHO05D004816 2.2e-186 656.0 418 75.4
BolC8t51904H Brassica oleracea HOM05D004143 ORTHO05D004816 2.8e-186 655.6 429 73.2
Eucgr.K00457 Eucalyptus grandis HOM05D004143 ORTHO05D004816 8.3e-186 654.1 415 75.9
C08p43580 Brassica napus HOM05D004143 ORTHO05D004816 2.4e-185 652.5 424 73.3
Lalb_Chr11g0067541 Lupinus albus HOM05D004143 ORTHO05D004816 5.4e-185 651.4 456 70.0
SEGI_09338 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 7.0e-185 651.0 434 69.8
Gorai.007G115000 Gossypium raimondii HOM05D004143 ORTHO05D004816 2.2e-183 646.0 441 70.5
SalBow4G1948 Salvia bowleyana HOM05D004143 ORTHO05D004816 6.5e-183 644.4 450 69.1
Medtr3g093290 Medicago truncatula HOM05D004143 ORTHO05D004816 1.9e-182 642.9 441 70.3
VMungo0647G0805 Vigna mungo HOM05D004143 ORTHO05D004816 2.5e-182 642.5 444 72.1
Eucgr.K00892 Eucalyptus grandis HOM05D004143 ORTHO05D004816 3.2e-182 642.1 446 70.6
Lalb_Chr23g0272031 Lupinus albus HOM05D004143 ORTHO05D004816 7.2e-182 641.0 439 69.7
SGA_v2.0_scaffold44G16868 Striga asiatica HOM05D004143 ORTHO05D004816 8.0e-181 637.5 430 71.6
Phvul.008G188500 Phaseolus vulgaris HOM05D004143 ORTHO05D004816 4.4e-179 631.7 426 73.0
SGA_v2.0_scaffold18G08489 Striga asiatica HOM05D004143 ORTHO05D004816 1.1e-177 627.1 448 68.1
HanXRQChr15g0472111 Helianthus annuus HOM05D004143 ORTHO05D004816 1.6e-176 623.2 454 65.6
Nn4g24300 Nelumbo nucifera HOM05D004143 ORTHO05D004816 7.3e-174 614.4 380 75.8
Gohir.A11G102900 Gossypium hirsutum HOM05D004143 ORTHO05D004816 3.6e-173 612.1 460 65.7
Atru.chr13.384 Acer truncatum HOM05D004143 ORTHO05D004816 4.7e-173 611.7 384 76.6
MBI04_g26129_MAGBIO Magnolia biondii HOM05D004143 ORTHO05D004816 6.8e-172 607.8 440 68.2
Zm00001eb418750 Zea mays HOM05D004143 ORTHO05D004816 1.2e-171 607.1 444 66.0
ECA233G4741 Erigeron canadensis HOM05D004143 ORTHO05D000001 2.2e-170 602.8 388 74.5
Atru.chr5.814 Acer truncatum HOM05D004143 ORTHO05D004816 1.7e-167 593.2 383 74.7
Duzib128G1652 Durio zibethinus HOM05D004143 ORTHO05D004816 6.2e-165 584.7 375 75.5
MD01G1230600 Malus domestica HOM05D004143 ORTHO05D004816 6.4e-154 548.1 389 68.6
Potri.012G011000 Populus trichocarpa HOM05D004143 ORTHO05D004816 6.0e-152 541.6 453 61.8
SEGI_21716 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 1.8e-148 530.0 422 62.1
Gohir.D11G107400 Gossypium hirsutum HOM05D004143 ORTHO05D004816 2.3e-143 513.1 461 58.4
SEGI_05818 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 1.6e-141 506.9 421 58.9
SMO340G0156 Selaginella moellendorffii HOM05D004143 ORTHO05D004816 3.6e-141 505.8 434 59.0
SMO239G0122 Selaginella moellendorffii HOM05D004143 ORTHO05D004816 1.2e-136 490.7 419 58.2
COL.COLO4_23082 Corchorus olitorius HOM05D004143 ORTHO05D004816 4.8e-133 478.8 457 56.7
Os04g0105400 Oryza sativa ssp. japonica HOM05D004143 ORTHO05D004816 4.6e-120 435.6 325 65.2
unitig_578.g16681 Utricularia gibba HOM05D004143 ORTHO05D004816 2.8e-117 426.4 283 72.8
Mapoly0086s0058 Marchantia polymorpha HOM05D004143 ORTHO05D004816 1.2e-115 421.0 438 49.8
SEGI_06275 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 3.2e-105 386.3 272 68.0
Cc02_g00640 Coffea canephora HOM05D004143 ORTHO05D004816 3.6e-104 382.9 239 75.3
Pp3c23_3660 Physcomitrium patens HOM05D004143 ORTHO05D004816 7.4e-102 375.2 426 45.8
CDE02G4135 Ceratophyllum demersum HOM05D004143 ORTHO05D004816 6.5e-98 362.1 433 45.7
TPR.G29284 Trifolium pratense HOM05D004143 ORTHO05D004816 7.2e-97 358.6 231 73.2
AagrBONN_evm.TU.Sc2ySwM_344.1928 Anthoceros agrestis HOM05D004143 ORTHO05D004816 2.6e-94 350.1 381 46.5
MBI04_g09827_MAGBIO Magnolia biondii HOM05D004143 ORTHO05D004816 4.0e-71 273.1 279 55.6
Cpa.g.c30701.1 Carica papaya HOM05D004143 ORTHO05D004816 1.5e-70 271.2 156 79.5
Cc02_g00650 Coffea canephora HOM05D004143 ORTHO05D004816 1.1e-52 211.8 149 70.5
SEGI_07746 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 1.2e-46 191.8 113 77.0
Actinidia28288 Actinidia chinensis HOM05D004143 ORTHO05D004816 4.1e-44 183.3 126 67.5
Solyc03g080020.4 Solanum lycopersicum HOM05D004143 ORTHO05D004816 1.1e-39 168.7 452 29.6
SEGI_40229 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 5.8e-38 162.9 95 76.8
Peaxi162Scf01026g00266 Petunia axillaris HOM05D004143 ORTHO05D004816 1.6e-32 144.8 453 28.0
VMungo1383G1334 Vigna mungo HOM05D004143 ORTHO05D432805 4.3e-25 120.2 95 61.1
GSVIVG01027551001 Vitis vinifera HOM05D000016 ORTHO05D000109 8.4e-21 105.9 73 69.9
TPR.G22104 Trifolium pratense HOM05D004143 ORTHO05D004816 1.6e-16 91.7 56 76.8
unitig_578.g16680 Utricularia gibba HOM05D004143 ORTHO05D004816 8.4e-13 79.3 79 55.7
Lj1g0000746 Lotus japonicus HOM05D001886 ORTHO05D005666 2.5e-09 67.8 195 29.7
Hma1.2p1_0105F.1_g050690 Hydrangea macrophylla HOM05D004298 ORTHO05D004816 2.8e-08 64.3 43 67.4
Hma1.2p1_1050F.1_g251950 Hydrangea macrophylla HOM05D004298 ORTHO05D004816 6.2e-08 63.2 43 65.1
Hund10629 Selenicereus undatus HOM05D001886 ORTHO05D005666 6.2e-08 63.2 243 21.4
Dinv35628 Davidia involucrata HOM05D001886 ORTHO05D005666 1.1e-07 62.4 193 26.4
Mapoly0174s0006 Marchantia polymorpha HOM05D001886 ORTHO05D005666 3.1e-07 60.8 149 23.5
Lj1g0019565 Lotus japonicus HOM05D001886 ORTHO05D005666 4.0e-07 60.5 197 25.9
Psat3g049200 Pisum sativum HOM05D001886 ORTHO05D005666 2.0e-06 58.2 260 22.3
arahy.Tifrunner.gnm1.ann1.LM62V2 Arachis hypogaea HOM05D001886 ORTHO05D005666 2.6e-06 57.8 405 24.4
Duzib093G1847 Durio zibethinus HOM05D001886 ORTHO05D005666 3.4e-06 57.4 194 25.3
MBI14_g24315_MAGBIO Magnolia biondii HOM05D001886 ORTHO05D005666 4.5e-06 57.0 192 26.6
Medtr7g099870 Medicago truncatula HOM05D001886 ORTHO05D005666 9.9e-06 55.8 146 28.1
Medtr7g099910 Medicago truncatula HOM05D001886 ORTHO05D005666 9.9e-06 55.8 147 27.9


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