Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0008592 Sechium edule HOM05D005104 ORTHO05D006614 1.8e-115 419.5 243 100.0
MELO3C018651.2 Cucumis melo HOM05D005104 ORTHO05D006614 1.5e-101 373.2 245 85.3
CsaV3_7G006430 Cucumis sativus L. HOM05D005104 ORTHO05D006614 2.8e-100 369.0 250 84.4
ClCG09G015340 Citrullus lanatus HOM05D005104 ORTHO05D006614 1.2e-98 363.6 267 77.2
Haze_10684 Corylus avellana HOM05D005104 ORTHO05D006614 8.4e-81 304.3 244 75.4
CiPaw.05G036500 Carya illinoinensis HOM05D005104 ORTHO05D006614 1.0e-78 297.4 248 75.8
Cfa005608 Carpinus fangiana HOM05D005104 ORTHO05D006614 1.8e-78 296.6 247 74.5
Lalb_Chr10g0097741 Lupinus albus HOM05D005104 ORTHO05D006614 3.9e-78 295.4 246 69.1
arahy.Tifrunner.gnm1.ann1.V9NXIE Arachis hypogaea HOM05D005104 ORTHO05D006614 8.7e-78 294.3 246 69.1
CANSAT11G2657 Cannabis sativa HOM05D005104 ORTHO05D006614 1.6e-76 290.0 261 66.7
arahy.Tifrunner.gnm1.ann1.PH7E5N Arachis hypogaea HOM05D005104 ORTHO05D006614 3.7e-76 288.9 246 69.1
Psat7g098720 Pisum sativum HOM05D005104 ORTHO05D006614 1.4e-75 287.0 247 63.6
Phvul.002G208000 Phaseolus vulgaris HOM05D005104 ORTHO05D006614 5.3e-75 285.0 247 64.0
VMungo0251G0802 Vigna mungo HOM05D005104 ORTHO05D006614 2.0e-74 283.1 247 62.3
Dinv24198 Davidia involucrata HOM05D005104 ORTHO05D006614 2.6e-74 282.7 255 67.5
Glyma.08G073500 Glycine max HOM05D005104 ORTHO05D006614 5.8e-74 281.6 249 70.3
Manes.14G166400 Manihot esculenta HOM05D005104 ORTHO05D006614 1.1e-72 277.3 246 63.4
Glyma.05G118400 Glycine max HOM05D005104 ORTHO05D006614 5.5e-72 275.0 249 67.9
Lj4g0020611 Lotus japonicus HOM05D005104 ORTHO05D006614 1.2e-71 273.9 245 61.2
PGR142G2776 Punica granatum HOM05D005104 ORTHO05D006614 1.6e-71 273.5 244 62.7
Thecc.02G140100 Theobroma cacao HOM05D005104 ORTHO05D006614 1.6e-71 273.5 248 69.8
Atru.chr6.1109 Acer truncatum HOM05D005104 ORTHO05D006614 4.6e-71 271.9 246 73.6
Eucgr.I02668 Eucalyptus grandis HOM05D005104 ORTHO05D006614 6.1e-71 271.6 245 60.0
Atru.chr6.1089 Acer truncatum HOM05D005104 ORTHO05D006614 1.3e-70 270.4 246 73.6
COL.COLO4_20953 Corchorus olitorius HOM05D005104 ORTHO05D006614 2.3e-70 269.6 248 63.7
Duzib248G0158 Durio zibethinus HOM05D005104 ORTHO05D006614 3.9e-70 268.9 246 59.8
TPR.G10460 Trifolium pratense HOM05D005104 ORTHO05D006614 3.9e-70 268.9 207 68.1
Medtr4g094252 Medicago truncatula HOM05D005104 ORTHO05D006614 6.7e-70 268.1 249 60.6
Gohir.A04G113100 Gossypium hirsutum HOM05D005104 ORTHO05D006614 4.3e-69 265.4 250 62.8
Ca_18345_v3 Cicer arietinum L. HOM05D005104 ORTHO05D006614 9.7e-69 264.2 268 57.8
Actinidia28058 Actinidia chinensis HOM05D005104 ORTHO05D006614 1.1e-67 260.8 259 59.8
Gohir.D04G154400 Gossypium hirsutum HOM05D005104 ORTHO05D006614 1.4e-67 260.4 248 62.9
Gorai.012G141700 Gossypium raimondii HOM05D005104 ORTHO05D006614 1.4e-67 260.4 248 62.9
Gohir.A04G112960 Gossypium hirsutum HOM05D005104 ORTHO05D006614 2.4e-67 259.6 198 67.7
GSVIVG01003083001 Vitis vinifera HOM05D005104 ORTHO05D006614 2.4e-67 259.6 252 57.9
CSS0037720 Camellia sinensis var. sinensis HOM05D005104 ORTHO05D006614 3.1e-67 259.2 257 65.8
MD10G1051500 Malus domestica HOM05D005104 ORTHO05D006614 5.3e-67 258.5 247 68.0
Prupe.8G062400 Prunus persica HOM05D005104 ORTHO05D006614 5.3e-67 258.5 248 65.7
TAR628G1132 Trochodendron aralioides HOM05D005104 ORTHO05D006614 6.9e-67 258.1 253 58.9
Ciclev10029197m.g Citrus clementina HOM05D005104 ORTHO05D006614 1.2e-66 257.3 244 67.6
QL11p020542 Quercus lobata HOM05D005104 ORTHO05D006614 1.3e-65 253.8 271 64.9
Nn1g05321 Nelumbo nucifera HOM05D005104 ORTHO05D006614 5.0e-65 251.9 252 62.7
TWI59G0245 Tripterygium wilfordii HOM05D005104 ORTHO05D006614 8.5e-65 251.1 247 57.9
Hma1.2p1_0522F.1_g171600 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 4.2e-64 248.8 204 69.1
Cpa.g.sc42.74 Carica papaya HOM05D005104 ORTHO05D006614 5.5e-64 248.4 257 59.1
Aqoxy6G00597 Aquilegia oxysepala HOM05D005104 ORTHO05D006614 7.2e-64 248.1 257 68.1
Lsat_1_v5_gn_5_107140 Lactuca sativa HOM05D005104 ORTHO05D006614 9.4e-64 247.7 247 66.4
RcHm_v2.0_Chr6g0273461 Rosa chinensis HOM05D005104 ORTHO05D006614 4.6e-63 245.4 247 65.6
HanXRQChr10g0295831 Helianthus annuus HOM05D005104 ORTHO05D006614 1.4e-62 243.8 248 58.5
SalBow6G6298 Salvia bowleyana HOM05D005104 ORTHO05D006614 2.3e-62 243.0 251 58.2
Oeu007957.1 Olea europaea HOM05D005104 ORTHO05D006614 3.9e-62 242.3 246 57.7
MSTRG.27791 Avicennia marina HOM05D005104 ORTHO05D006614 8.8e-62 241.1 247 58.3
SalBow6G6009 Salvia bowleyana HOM05D005104 ORTHO05D006614 8.8e-62 241.1 251 57.8
Migut.N01063 Erythranthe guttata HOM05D005104 ORTHO05D006614 1.1e-61 240.7 245 58.0
FvH4_2g12710 Fragaria vesca HOM05D005104 ORTHO05D006614 4.3e-61 238.8 245 63.7
SGA_v2.0_scaffold45G17311 Striga asiatica HOM05D005104 ORTHO05D006614 3.7e-60 235.7 250 59.6
vmacro19925 Vaccinium macrocarpon HOM05D005104 ORTHO05D006614 2.4e-59 233.0 300 56.7
DCAR_001791 Daucus carota HOM05D005104 ORTHO05D006614 4.1e-59 232.3 251 54.2
Cc02_g21630 Coffea canephora HOM05D005104 ORTHO05D006614 6.9e-59 231.5 243 67.1
CDE10G0587 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 9.1e-59 231.1 250 53.2
FAN20G1981 Fragaria x ananassa HOM05D005104 ORTHO05D006614 9.1e-59 231.1 245 62.4
ECA234G0341 Erigeron canadensis HOM05D005104 ORTHO05D006614 1.5e-58 230.3 185 68.1
FAN27G3119 Fragaria x ananassa HOM05D005104 ORTHO05D006614 2.0e-58 229.9 246 60.2
Rhsim05G0108500 Rhododendron simsii HOM05D005104 ORTHO05D006614 5.9e-58 228.4 182 68.1
Potri.003G023601 Populus trichocarpa HOM05D005104 ORTHO05D006614 1.7e-57 226.9 259 63.7
PSO781G0266 Papaver somniferum HOM05D005104 ORTHO05D006614 8.5e-57 224.6 257 54.5
PGSC0003DMG400017693 Solanum tuberosum HOM05D005104 ORTHO05D006614 1.4e-56 223.8 195 64.6
Peaxi162Scf00003g03543 Petunia axillaris HOM05D005104 ORTHO05D006614 2.5e-56 223.0 250 64.4
Solyc10g047220.2 Solanum lycopersicum HOM05D005104 ORTHO05D006614 3.2e-56 222.6 195 64.1
Sopen10g017460 Solanum pennellii HOM05D005104 ORTHO05D006614 5.5e-56 221.9 195 64.1
BcaC01g02673 Brassica carinata HOM05D005104 ORTHO05D006614 7.2e-56 221.5 245 58.0
Thhalv10004872m.g Eutrema salsugineum HOM05D005104 ORTHO05D006614 9.4e-56 221.1 243 52.3
HPP92_006000 Vanilla planifolia HOM05D005104 ORTHO05D006614 1.2e-55 220.7 251 54.2
BolC3t18470H Brassica oleracea HOM05D005104 ORTHO05D006614 2.7e-55 219.5 245 57.6
C03p62090 Brassica napus HOM05D005104 ORTHO05D006614 3.6e-55 219.2 245 57.6
A06p30880 Brassica napus HOM05D005104 ORTHO05D006614 4.7e-55 218.8 245 57.6
Sp2g27220 Schrenkiella parvula HOM05D005104 ORTHO05D006614 1.8e-54 216.9 243 52.7
BcaC02g09479 Brassica carinata HOM05D002012 ORTHO05D001992 6.7e-54 214.9 188 60.1
AL8G41430 Arabidopsis lyrata HOM05D005104 ORTHO05D006614 1.1e-53 214.2 246 50.8
BcaB07g29727 Brassica carinata HOM05D005104 ORTHO05D006614 1.1e-53 214.2 245 51.0
PSO541G4381 Papaver somniferum HOM05D005104 ORTHO05D006614 1.1e-53 214.2 254 52.8
ATR0564G397 Amborella trichopoda HOM05D005104 ORTHO05D006614 1.5e-53 213.8 254 52.4
AT5G64160 Arabidopsis thaliana HOM05D005104 ORTHO05D006614 2.0e-53 213.4 246 50.8
BcaB02g09781 Brassica carinata HOM05D005104 ORTHO05D006614 2.0e-53 213.4 243 54.3
CARHR278070 Cardamine hirsuta HOM05D005104 ORTHO05D006614 3.7e-52 209.1 243 51.4
Carub.0008s2495 Capsella rubella HOM05D005104 ORTHO05D006614 6.3e-52 208.4 249 50.6
C09p58340 Brassica napus HOM05D005104 ORTHO05D006614 8.2e-52 208.0 192 58.3
BolC9t58698H Brassica oleracea HOM05D005104 ORTHO05D006614 8.2e-52 208.0 192 58.3
Sabra01G0157800 Salix brachista HOM05D005104 ORTHO05D006614 8.2e-52 208.0 277 56.0
C09p58390 Brassica napus HOM05D005104 ORTHO05D006614 9.1e-51 204.5 192 57.8
Hund06391 Selenicereus undatus HOM05D005104 ORTHO05D006614 3.5e-50 202.6 243 50.2
Oeu026158.1 Olea europaea HOM05D005104 ORTHO05D006614 5.9e-50 201.8 174 63.2
BolC6t37855H Brassica oleracea HOM05D005104 ORTHO05D006614 1.0e-49 201.1 192 57.3
C06p26800 Brassica napus HOM05D005104 ORTHO05D006614 2.9e-49 199.5 192 56.8
BcaC08g45071 Brassica carinata HOM05D005104 ORTHO05D006614 3.8e-49 199.1 192 56.8
Aa31LG1G17770 Aethionema arabicum HOM05D005104 ORTHO05D006614 5.0e-49 198.7 260 47.3
AUR62010117 Chenopodium quinoa HOM05D005104 ORTHO05D006614 8.5e-49 198.0 243 59.7
AUR62013112 Chenopodium quinoa HOM05D005104 ORTHO05D006614 1.1e-48 197.6 243 60.5
SEGI_35517 Sequoiadendron giganteum HOM05D005104 ORTHO05D006614 7.2e-48 194.9 255 47.8
Os02g0753200 Oryza sativa ssp. japonica HOM05D005104 ORTHO05D006614 2.7e-47 193.0 181 59.1
C02p46090 Brassica napus HOM05D005104 ORTHO05D006614 8.0e-47 191.4 188 55.9
Hma1.2p1_0522F.1_g171590 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 8.0e-47 191.4 208 59.1
Lj5A240T40 Lonicera japonica HOM05D005104 ORTHO05D006614 3.0e-46 189.5 136 75.0
GSVIVG01003087001 Vitis vinifera HOM05D005104 ORTHO05D006614 1.5e-45 187.2 150 68.0
GSVIVG01013334001 Vitis vinifera HOM05D005104 ORTHO05D006614 1.5e-45 187.2 150 68.7
FAN24G3378 Fragaria x ananassa HOM05D005104 ORTHO05D006614 2.6e-45 186.4 132 70.5
BraA03t13815Z Brassica rapa HOM05D005104 ORTHO05D006614 2.8e-44 183.0 188 52.7
MBI02_g08741_MAGBIO Magnolia biondii HOM05D005104 ORTHO05D006614 1.6e-42 177.2 135 71.1
Zm00001eb194200 Zea mays HOM05D005104 ORTHO05D006614 2.0e-42 176.8 181 55.8
Ah.01g009520 Amaranthus hybridus HOM05D005104 ORTHO05D006614 1.3e-41 174.1 243 47.3
Zm00001eb255190 Zea mays HOM05D005104 ORTHO05D006614 5.0e-41 172.2 254 44.9
GSVIVG01003093001 Vitis vinifera HOM05D005104 ORTHO05D006614 1.5e-37 160.6 121 71.9
Mapoly0096s0033 Marchantia polymorpha HOM05D005104 ORTHO05D006614 3.5e-34 149.4 212 44.8
Sc08g0003350 Simmondsia chinensis HOM05D005104 ORTHO05D006614 1.3e-33 147.5 175 50.9
SMO117G0229 Selaginella moellendorffii HOM05D005104 ORTHO05D006614 7.2e-32 141.7 189 49.2
AagrBONN_evm.TU.Sc2ySwM_117.984 Anthoceros agrestis HOM05D005104 ORTHO05D006614 2.7e-31 139.8 191 45.5
Pp3c18_21190 Physcomitrium patens HOM05D005104 ORTHO05D006614 1.8e-30 137.1 249 41.4
Nitab4.5_0000078g0030 Nicotiana tabacum HOM05D005104 ORTHO05D006614 2.3e-30 136.7 257 49.4
unitig_22.g6836 Utricularia gibba HOM05D001058 ORTHO05D000911 4.4e-29 132.5 193 45.6
CDE10G1356 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 2.8e-23 113.2 178 43.3
BolC4t25904H Brassica oleracea HOM05D005104 ORTHO05D006614 3.6e-23 112.8 72 73.6
CAN.G1.36 Capsicum annuum HOM05D005104 ORTHO05D006614 6.1e-23 112.1 176 50.6
EL10Ac9g21466 Beta vulgaris HOM05D005104 ORTHO05D006614 6.8e-22 108.6 73 74.0
Nitab4.5_0005015g0050 Nicotiana tabacum HOM05D005104 ORTHO05D006614 3.7e-20 102.8 157 58.0
THA.LOC104818435 Tarenaya hassleriana HOM05D005104 ORTHO05D006614 3.7e-20 102.8 172 41.3
Duzib132G1169 Durio zibethinus HOM05D005104 ORTHO05D006614 2.7e-18 96.7 135 43.0
CBR_g47116 Chara braunii HOM05D005104 ORTHO05D006614 1.3e-17 94.4 224 36.2
Hma1.2p1_0516F.1_g170490 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 2.3e-14 83.6 98 49.0
arahy.Tifrunner.gnm1.ann1.H2YG1F Arachis hypogaea HOM05D005104 ORTHO05D006614 8.9e-14 81.6 73 60.3
A02p26040 Brassica napus HOM05D005104 ORTHO05D006614 1.9e-11 73.9 101 45.5
Potri.001G206032 Populus trichocarpa HOM05D005104 ORTHO05D006614 2.5e-08 63.5 56 62.5
EL10Ac9g21465 Beta vulgaris HOM05D005104 ORTHO05D006614 4.3e-08 62.8 237 36.3
C07p45690 Brassica napus HOM05D005104 ORTHO05D021970 3.6e-07 59.7 119 38.7
BolC6t38485H Brassica oleracea HOM05D005104 ORTHO05D006614 4.7e-07 59.3 82 46.3
A10p06060 Brassica napus HOM05D005104 ORTHO05D006614 4.0e-06 56.2 104 43.3
C09p03790 Brassica napus HOM05D005104 ORTHO05D006614 4.0e-06 56.2 119 37.0
C03p52730 Brassica napus HOM05D005104 ORTHO05D021970 6.8e-06 55.5 122 35.2
C05p26840 Brassica napus HOM05D005104 ORTHO05D006614 8.9e-06 55.1 109 39.4
FAN15G2545 Fragaria x ananassa HOM05D005104 ORTHO05D006614 8.9e-06 55.1 121 54.5


User provided reference genes

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