Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0008558 Sechium edule HOM05D008150 ORTHO05D010312 1.8e-124 449.1 212 100.0
ClCG01G022200 Citrullus lanatus HOM05D008150 ORTHO05D010312 3.3e-49 199.1 211 50.2
MELO3C007368.2 Cucumis melo HOM05D008150 ORTHO05D010312 6.9e-47 191.4 214 47.7
CsaV3_6G049300 Cucumis sativus L. HOM05D008150 ORTHO05D010312 2.9e-45 186.0 214 46.3
Sed0002875 Sechium edule HOM05D008150 ORTHO05D010312 7.9e-43 177.9 215 45.1
ClCG03G016610 Citrullus lanatus HOM05D008150 ORTHO05D010312 3.3e-41 172.6 209 44.5
CsaV3_1G039380 Cucumis sativus L. HOM05D008150 ORTHO05D010312 8.2e-40 167.9 205 42.9
MELO3C015364.2 Cucumis melo HOM05D008150 ORTHO05D010312 1.2e-38 164.1 210 42.9
Sed0025201 Sechium edule HOM05D008150 ORTHO05D010312 1.1e-36 157.5 195 43.6
Sed0013863 Sechium edule HOM05D008150 ORTHO05D010312 1.6e-27 127.1 226 36.3
Sed0015391 Sechium edule HOM05D008150 ORTHO05D010312 1.6e-27 127.1 213 36.6
Sed0019166 Sechium edule HOM05D008150 ORTHO05D010312 3.0e-26 122.9 211 35.1
Sed0011109 Sechium edule HOM05D008150 ORTHO05D010312 7.5e-25 118.2 218 39.0
Sed0001873 Sechium edule HOM05D008150 ORTHO05D010312 1.8e-23 113.6 214 36.0
Sed0002625 Sechium edule HOM05D008150 ORTHO05D010312 1.8e-23 113.6 226 35.0
Sed0007116 Sechium edule HOM05D008150 ORTHO05D010312 2.4e-23 113.2 215 32.6
Sed0000179 Sechium edule HOM05D008150 ORTHO05D010312 1.0e-21 107.8 221 31.2
ClCG10G014280 Citrullus lanatus HOM05D008150 ORTHO05D010312 8.5e-21 104.8 226 33.6
Sed0000604 Sechium edule HOM05D008150 ORTHO05D010312 1.0e-18 97.8 225 36.4
Sed0017849 Sechium edule HOM05D008150 ORTHO05D010312 1.3e-16 90.9 207 27.5
MELO3C002009.2 Cucumis melo HOM05D008150 ORTHO05D010312 2.8e-16 89.7 197 31.5
Sed0009586 Sechium edule HOM05D008150 ORTHO05D010312 2.4e-15 86.7 117 41.0
Sed0009722 Sechium edule HOM05D008150 ORTHO05D010312 2.4e-15 86.7 198 34.3
CsaV3_1G002720 Cucumis sativus L. HOM05D008150 ORTHO05D010312 1.2e-14 84.3 190 31.1
ClCG06G016080 Citrullus lanatus HOM05D008150 ORTHO05D010312 1.6e-14 84.0 208 29.8
Sed0019399 Sechium edule HOM05D008150 ORTHO05D010312 2.0e-14 83.6 191 27.2
Sed0020127 Sechium edule HOM05D008150 ORTHO05D010312 5.0e-13 79.0 212 29.2
CsaV3_3G042360 Cucumis sativus L. HOM05D008150 ORTHO05D010312 1.1e-12 77.8 252 29.0
Sed0023044 Sechium edule HOM05D008150 ORTHO05D010312 4.7e-11 72.4 219 26.5
CsaV3_1G005780 Cucumis sativus L. HOM05D008150 ORTHO05D010312 3.0e-10 69.7 145 32.4
ClCG01G025230 Citrullus lanatus HOM05D008150 ORTHO05D010312 6.8e-10 68.6 123 37.4
Potri.001G224200 Populus trichocarpa HOM05D000007 ORTHO05D000521 4.9e-08 62.4 181 26.5
Sed0004387 Sechium edule HOM05D008150 ORTHO05D010312 4.9e-08 62.4 228 27.2
CSS0024916 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 8.3e-08 61.6 188 25.0
PSO478G3792 Papaver somniferum HOM05D000007 ORTHO05D000017 7.0e-07 58.5 194 26.8
Atru.chr3.38 Acer truncatum HOM05D000007 ORTHO05D000017 9.2e-07 58.2 140 28.6
CsaV3_1G003460 Cucumis sativus L. HOM05D008150 ORTHO05D010312 1.2e-06 57.8 212 25.5
Migut.C01223 Erythranthe guttata HOM05D000007 ORTHO05D000521 1.6e-06 57.4 198 25.3
Peaxi162Scf00583g00011 Petunia axillaris HOM05D000007 ORTHO05D000521 5.9e-06 55.5 169 26.0


User provided reference genes

Program Settings