Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0008494 Sechium edule HOM05D006799 ORTHO05D008391 4.8e-103 377.9 193 100.0
ClCG09G008610 Citrullus lanatus HOM05D006799 ORTHO05D008391 1.6e-87 326.2 197 84.8
CsaV3_7G026360 Cucumis sativus L. HOM05D006799 ORTHO05D008391 1.0e-84 317.0 198 80.8
MELO3C021082.2 Cucumis melo HOM05D006799 ORTHO05D008391 2.7e-82 308.9 207 77.3
Haze_15251 Corylus avellana HOM05D006799 ORTHO05D008391 2.0e-69 266.2 198 67.7
QL09p051225 Quercus lobata HOM05D006799 ORTHO05D008391 5.9e-69 264.6 196 67.3
TAR362G0955 Trochodendron aralioides HOM05D006799 ORTHO05D008391 7.7e-69 264.2 189 68.8
Ciclev10022385m.g Citrus clementina HOM05D006799 ORTHO05D008391 2.9e-68 262.3 194 69.1
COL.COLO4_15616 Corchorus olitorius HOM05D006799 ORTHO05D008391 4.7e-66 255.0 179 69.3
Potri.002G246000 Populus trichocarpa HOM05D006799 ORTHO05D008391 1.8e-65 253.1 179 68.2
PGR044G2699 Punica granatum HOM05D006799 ORTHO05D008391 3.0e-65 252.3 198 64.6
Sabra02G0187300 Salix brachista HOM05D006799 ORTHO05D008391 3.0e-65 252.3 196 64.3
Cfa004160 Carpinus fangiana HOM05D006799 ORTHO05D008391 2.0e-64 249.6 222 59.5
Dinv12648 Davidia involucrata HOM05D006799 ORTHO05D008391 2.0e-64 249.6 194 65.5
MD05G1171500 Malus domestica HOM05D006799 ORTHO05D008391 2.0e-64 249.6 198 62.1
Hma1.2p1_0226F.1_g095380 Hydrangea macrophylla HOM05D006799 ORTHO05D008391 4.4e-64 248.4 200 62.5
Actinidia23709 Actinidia chinensis HOM05D006799 ORTHO05D008391 5.7e-64 248.1 192 65.1
Solyc06g007800.4 Solanum lycopersicum HOM05D006799 ORTHO05D008391 5.7e-64 248.1 173 68.8
CAN.G181.54 Capsicum annuum HOM05D006799 ORTHO05D008391 7.4e-64 247.7 180 67.8
GSVIVG01003251001 Vitis vinifera HOM05D006799 ORTHO05D008391 9.7e-64 247.3 170 68.2
Manes.13G049500 Manihot esculenta HOM05D006799 ORTHO05D008391 2.2e-63 246.1 196 62.8
FAN24G0472 Fragaria x ananassa HOM05D004056 ORTHO05D008391 3.7e-63 245.4 197 60.4
Prupe.8G198800 Prunus persica HOM05D006799 ORTHO05D008391 3.7e-63 245.4 196 62.8
Thecc.01G219900 Theobroma cacao HOM05D006799 ORTHO05D008391 3.7e-63 245.4 184 65.8
MD10G1159700 Malus domestica HOM05D006799 ORTHO05D008391 4.8e-63 245.0 198 60.6
Nitab4.5_0000045g0540 Nicotiana tabacum HOM05D006799 ORTHO05D008391 4.8e-63 245.0 176 69.3
Gorai.001G105200 Gossypium raimondii HOM05D006799 ORTHO05D008391 6.3e-63 244.6 182 68.1
Sopen06g002680 Solanum pennellii HOM05D006799 ORTHO05D008391 6.3e-63 244.6 180 66.1
Gohir.D07G097800 Gossypium hirsutum HOM05D006799 ORTHO05D008391 8.2e-63 244.2 182 67.6
Gohir.A07G093200 Gossypium hirsutum HOM05D006799 ORTHO05D008391 1.1e-62 243.8 182 67.6
Peaxi162Scf00068g02310 Petunia axillaris HOM05D006799 ORTHO05D008391 1.4e-62 243.4 177 67.8
PGSC0003DMG400022033 Solanum tuberosum HOM05D006799 ORTHO05D008391 1.4e-62 243.4 180 66.1
FvH4_2g18530 Fragaria vesca HOM05D006799 ORTHO05D008391 1.8e-62 243.0 197 59.9
TWI18G0944 Tripterygium wilfordii HOM05D006799 ORTHO05D008391 1.8e-62 243.0 184 65.8
CSS0002557 Camellia sinensis var. sinensis HOM05D006799 ORTHO05D008391 5.3e-62 241.5 193 62.7
CiPaw.02G023800 Carya illinoinensis HOM05D006799 ORTHO05D008391 5.3e-62 241.5 200 60.5
FAN15G2777 Fragaria x ananassa HOM05D004056 ORTHO05D008391 7.0e-62 241.1 197 59.4
Cpa.g.sc21.107 Carica papaya HOM05D006799 ORTHO05D008391 9.1e-62 240.7 203 61.1
Rhsim01G0253200 Rhododendron simsii HOM05D006799 ORTHO05D008391 9.1e-62 240.7 193 63.7
Atru.chr6.1426 Acer truncatum HOM05D006799 ORTHO05D008391 2.6e-61 239.2 191 64.9
Nitab4.5_0002641g0110 Nicotiana tabacum HOM05D006799 ORTHO05D008391 2.6e-61 239.2 173 67.1
Duzib138G1661 Durio zibethinus HOM05D006799 ORTHO05D008391 5.9e-61 238.0 170 68.8
DCAR_012670 Daucus carota HOM05D006799 ORTHO05D008391 1.0e-60 237.3 189 65.1
RcHm_v2.0_Chr6g0284091 Rosa chinensis HOM05D006799 ORTHO05D008391 3.8e-60 235.3 199 59.3
Lj1C89G17 Lonicera japonica HOM05D006799 ORTHO05D008391 6.5e-60 234.6 187 63.1
CANSAT01G3095 Cannabis sativa HOM05D006799 ORTHO05D008391 1.1e-59 233.8 196 62.8
Dinv19171 Davidia involucrata HOM05D006799 ORTHO05D008391 1.5e-59 233.4 171 69.6
Eucgr.K02137 Eucalyptus grandis HOM05D006799 ORTHO05D008391 1.9e-59 233.0 171 66.7
Hund05578 Selenicereus undatus HOM05D006799 ORTHO05D008391 4.2e-59 231.9 181 63.0
Sc17g0002120 Simmondsia chinensis HOM05D006799 ORTHO05D008391 6.1e-58 228.0 177 63.3
vmacro14734 Vaccinium macrocarpon HOM05D006799 ORTHO05D008391 1.8e-57 226.5 241 52.7
EL10Ac5g12475 Beta vulgaris HOM05D006799 ORTHO05D008391 3.0e-57 225.7 171 64.9
Nitab4.5_0002616g0150 Nicotiana tabacum HOM05D006799 ORTHO05D008391 3.0e-57 225.7 197 58.4
Cc01_g16700 Coffea canephora HOM05D006799 ORTHO05D008391 1.1e-56 223.8 182 62.1
SGA_v2.0_scaffold6G03220 Striga asiatica HOM05D006799 ORTHO05D008391 2.0e-56 223.0 196 59.7
AUR62019885 Chenopodium quinoa HOM05D006799 ORTHO05D008391 3.3e-56 222.2 178 61.2
Aqoxy5G00028 Aquilegia oxysepala HOM05D006799 ORTHO05D008391 3.7e-55 218.8 175 61.1
MSTRG.17994 Avicennia marina HOM05D006799 ORTHO05D008391 6.3e-55 218.0 193 58.0
MBI11_g07417_MAGBIO Magnolia biondii HOM05D006799 ORTHO05D008391 1.1e-54 217.2 188 59.0
AUR62007023 Chenopodium quinoa HOM05D006799 ORTHO05D008391 1.4e-54 216.9 178 60.1
THA.LOC104804623 Tarenaya hassleriana HOM05D006799 ORTHO05D008391 3.1e-54 215.7 178 62.4
Lsat_1_v5_gn_8_89340 Lactuca sativa HOM05D006799 ORTHO05D008391 7.0e-54 214.5 160 63.8
Migut.N00632 Erythranthe guttata HOM05D006799 ORTHO05D008391 1.2e-53 213.8 191 56.5
Glyma.17G151300 Glycine max HOM05D006799 ORTHO05D008391 2.0e-53 213.0 181 56.9
TPR.G11194 Trifolium pratense HOM05D006799 ORTHO05D008391 2.0e-53 213.0 177 58.2
VMungo0331G1591 Vigna mungo HOM05D006799 ORTHO05D008391 2.0e-53 213.0 197 54.3
SalBow3G4070 Salvia bowleyana HOM05D006799 ORTHO05D008391 2.6e-53 212.6 180 58.9
Psat4g203520 Pisum sativum HOM05D006799 ORTHO05D008391 3.8e-52 208.8 181 56.4
ECA236G1739 Erigeron canadensis HOM05D006799 ORTHO05D008391 8.5e-52 207.6 179 57.5
arahy.Tifrunner.gnm1.ann1.AR5NL3 Arachis hypogaea HOM05D006799 ORTHO05D008391 2.7e-50 202.6 189 52.9
Medtr8g012725 Medicago truncatula HOM05D006799 ORTHO05D008391 3.6e-50 202.2 173 57.2
PSO063G5306 Papaver somniferum HOM05D006799 ORTHO05D008391 4.7e-50 201.8 195 53.3
Aa31LG9G5010 Aethionema arabicum HOM05D006799 ORTHO05D008391 1.0e-49 200.7 189 55.0
CDE05G2155 Ceratophyllum demersum HOM05D006799 ORTHO05D008391 1.0e-49 200.7 180 56.7
Carub.0003s2545 Capsella rubella HOM05D006799 ORTHO05D008391 1.4e-49 200.3 182 55.5
Phvul.010G021800 Phaseolus vulgaris HOM05D006799 ORTHO05D008391 1.4e-49 200.3 177 55.4
unitig_0.g374 Utricularia gibba HOM05D006799 ORTHO05D008391 1.4e-49 200.3 181 55.2
arahy.Tifrunner.gnm1.ann1.H272JM Arachis hypogaea HOM05D006799 ORTHO05D008391 4.0e-49 198.7 189 51.9
Lalb_Chr12g0209871 Lupinus albus HOM05D006799 ORTHO05D008391 4.0e-49 198.7 187 54.0
Lj3g0009647 Lotus japonicus HOM05D006799 ORTHO05D008391 2.6e-48 196.1 177 56.5
AL3G40810 Arabidopsis lyrata HOM05D006799 ORTHO05D008391 4.4e-48 195.3 182 55.5
CARHR101440 Cardamine hirsuta HOM05D006799 ORTHO05D008391 9.7e-48 194.1 168 56.0
AT3G25120 Arabidopsis thaliana HOM05D006799 ORTHO05D008391 1.3e-47 193.7 184 54.9
Thhalv10002682m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 5.3e-46 188.3 168 56.5
Os04g0376100 Oryza sativa ssp. japonica HOM05D006799 ORTHO05D008391 1.2e-45 187.2 194 48.5
Ah.12g052960 Amaranthus hybridus HOM05D006799 ORTHO05D008391 2.7e-45 186.0 179 53.1
A07p07240 Brassica napus HOM05D006799 ORTHO05D008391 1.3e-44 183.7 168 54.8
BcaC06g35782 Brassica carinata HOM05D006799 ORTHO05D008391 2.9e-44 182.6 168 54.2
BraA07t28510Z Brassica rapa HOM05D006799 ORTHO05D008391 6.5e-44 181.4 168 54.8
HanXRQChr16g0500591 Helianthus annuus HOM05D006799 ORTHO05D008391 6.5e-44 181.4 162 58.6
Sp3g22710 Schrenkiella parvula HOM05D006799 ORTHO05D008391 1.5e-43 180.3 168 54.2
Ca_23225_v3 Cicer arietinum L. HOM05D006799 ORTHO05D008391 4.2e-43 178.7 151 57.0
BolC7t41559H Brassica oleracea HOM05D006799 ORTHO05D008391 7.2e-43 177.9 169 53.8
Zm00001eb086040 Zea mays HOM05D006799 ORTHO05D008391 9.4e-43 177.6 219 45.7
C07p10930 Brassica napus HOM05D006799 ORTHO05D008391 1.6e-42 176.8 169 53.3
A04p08990 Brassica napus HOM05D006799 ORTHO05D008391 2.7e-42 176.0 195 50.8
BraA04t16594Z Brassica rapa HOM05D006799 ORTHO05D008391 2.7e-42 176.0 195 50.8
BcaC02g09450 Brassica carinata HOM05D006799 ORTHO05D008391 6.1e-42 174.9 197 50.8
CARHR218390 Cardamine hirsuta HOM05D006799 ORTHO05D008391 6.1e-42 174.9 159 56.0
BcaB03g16157 Brassica carinata HOM05D006799 ORTHO05D008391 8.0e-42 174.5 195 50.3
ATR0561G177 Amborella trichopoda HOM05D006799 ORTHO05D008391 1.4e-41 173.7 176 52.8
BolC4t25853H Brassica oleracea HOM05D006799 ORTHO05D008391 8.8e-41 171.0 197 50.3
C04p42860 Brassica napus HOM05D006799 ORTHO05D008391 1.2e-40 170.6 197 50.3
BcaB06g26722 Brassica carinata HOM05D006799 ORTHO05D008391 4.4e-40 168.7 169 54.4
Peaxi162Scf00372g01214 Petunia axillaris HOM05D006799 ORTHO05D008391 9.5e-35 151.0 107 66.4
Thhalv10026882m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 2.3e-33 146.4 196 45.9
FAN27G1455 Fragaria x ananassa HOM05D006799 ORTHO05D008391 1.2e-32 144.1 125 56.8
Sc17g0002130 Simmondsia chinensis HOM05D006799 ORTHO05D008391 4.4e-32 142.1 93 72.0
SEGI_12663 Sequoiadendron giganteum HOM05D006799 ORTHO05D008391 2.2e-31 139.8 181 40.9
arahy.Tifrunner.gnm1.ann1.9RT6YB Arachis hypogaea HOM05D006799 ORTHO05D008391 1.6e-26 123.6 107 56.1
Rhsim01G0253100 Rhododendron simsii HOM05D006799 ORTHO05D008391 1.1e-17 94.4 97 52.6
Mapoly0010s0131 Marchantia polymorpha HOM05D006799 ORTHO05D008391 3.1e-17 92.8 169 35.5
Pp3c22_13870 Physcomitrium patens HOM05D006799 ORTHO05D008391 6.8e-17 91.7 187 33.7
AagrBONN_evm.TU.Sc2ySwM_228.181 Anthoceros agrestis HOM05D006799 ORTHO05D008391 1.4e-14 84.0 174 32.2
CBR_g52029 Chara braunii HOM05D006799 ORTHO05D008391 8.6e-12 74.7 113 35.4


User provided reference genes

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