Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0008492 Sechium edule HOM05D006913 ORTHO05D008720 1.8e-134 482.6 249 100.0
Sed0005932 Sechium edule HOM05D006913 ORTHO05D008720 8.1e-79 297.7 204 79.4
ClCG09G004810 Citrullus lanatus HOM05D006913 ORTHO05D008720 3.0e-73 279.3 217 72.8
CsaV3_7G030270 Cucumis sativus L. HOM05D006913 ORTHO05D008720 5.8e-69 265.0 195 76.9
MELO3C023629.2 Cucumis melo HOM05D006913 ORTHO05D008720 3.8e-68 262.3 195 76.4
Prupe.3G005300 Prunus persica HOM05D006913 ORTHO05D008720 6.0e-66 255.0 191 69.6
Cfa004859 Carpinus fangiana HOM05D006913 ORTHO05D008720 1.3e-65 253.8 195 70.8
Haze_05096 Corylus avellana HOM05D006913 ORTHO05D008720 1.3e-65 253.8 195 70.8
MD09G1287900 Malus domestica HOM05D006913 ORTHO05D008720 1.3e-65 253.8 192 70.3
MD17G1280100 Malus domestica HOM05D006913 ORTHO05D008720 1.7e-65 253.4 185 71.9
Hma1.2p1_0408F.1_g146440 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 3.0e-65 252.7 199 67.8
Thecc.01G320200 Theobroma cacao HOM05D006913 ORTHO05D008720 3.9e-65 252.3 186 73.1
CiPaw.07G121500 Carya illinoinensis HOM05D006913 ORTHO05D008720 1.1e-64 250.8 195 70.8
TWI59G1195 Tripterygium wilfordii HOM05D006913 ORTHO05D008720 3.3e-64 249.2 186 71.5
QL12p018506 Quercus lobata HOM05D006913 ORTHO05D008720 7.3e-64 248.1 201 70.1
GSVIVG01028181001 Vitis vinifera HOM05D006913 ORTHO05D008720 1.3e-63 247.3 186 70.4
Duzib138G1774 Durio zibethinus HOM05D006913 ORTHO05D008720 2.1e-63 246.5 189 72.5
FvH4_1g26590 Fragaria vesca HOM05D006913 ORTHO05D008720 3.6e-63 245.7 187 66.8
Atru.chr5.924 Acer truncatum HOM05D006913 ORTHO05D008720 1.1e-62 244.2 195 69.7
CSS0007691 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 1.8e-62 243.4 194 66.5
CSS0013168 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 5.3e-62 241.9 194 66.5
Ciclev10022378m.g Citrus clementina HOM05D006913 ORTHO05D008720 1.2e-61 240.7 191 68.1
Manes.01G231800 Manihot esculenta HOM05D006913 ORTHO05D008720 1.2e-61 240.7 193 67.9
FAN28G1862 Fragaria x ananassa HOM05D006913 ORTHO05D008720 1.5e-61 240.4 187 65.8
Lalb_Chr04g0260061 Lupinus albus HOM05D006913 ORTHO05D008720 5.8e-61 238.4 185 70.3
Nn3g21840 Nelumbo nucifera HOM05D006913 ORTHO05D008720 3.8e-60 235.7 183 69.9
Dinv12109 Davidia involucrata HOM05D006913 ORTHO05D008720 6.4e-60 235.0 189 66.7
Potri.002G191300 Populus trichocarpa HOM05D006913 ORTHO05D008720 6.4e-60 235.0 185 68.1
RcHm_v2.0_Chr3g0486731 Rosa chinensis HOM05D006913 ORTHO05D008720 6.4e-60 235.0 192 64.6
TAR362G1022 Trochodendron aralioides HOM05D006913 ORTHO05D008720 6.4e-60 235.0 184 69.0
SalBow3G0392 Salvia bowleyana HOM05D006913 ORTHO05D008720 1.1e-59 234.2 194 66.0
Lj1g0024926 Lotus japonicus HOM05D006913 ORTHO05D008720 5.4e-59 231.9 146 82.9
Glyma.19G219300 Glycine max HOM05D006913 ORTHO05D008720 7.1e-59 231.5 145 80.7
Dinv33147 Davidia involucrata HOM05D006913 ORTHO05D008720 9.3e-59 231.1 198 63.6
Cpa.g.c29544.2 Carica papaya HOM05D006913 ORTHO05D008720 1.2e-58 230.7 174 69.5
Migut.D00043 Erythranthe guttata HOM05D006913 ORTHO05D008720 1.6e-58 230.3 194 64.4
Solyc06g009400.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 2.7e-58 229.6 196 64.8
Nitab4.5_0000363g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 4.6e-58 228.8 194 66.5
PGSC0003DMG400007277 Solanum tuberosum HOM05D006913 ORTHO05D008720 4.6e-58 228.8 196 64.3
Carub.0006s3531 Capsella rubella HOM05D006913 ORTHO05D008720 6.0e-58 228.4 188 66.5
PGR083G1650 Punica granatum HOM05D006913 ORTHO05D008720 6.0e-58 228.4 215 61.9
Aqoxy5G02741 Aquilegia oxysepala HOM05D006913 ORTHO05D008720 7.9e-58 228.0 183 67.8
Nitab4.5_0003324g0110 Nicotiana tabacum HOM05D006913 ORTHO05D008720 1.3e-57 227.3 193 64.8
PSO724G1078 Papaver somniferum HOM05D006913 ORTHO05D008720 1.8e-57 226.9 196 62.8
Sopen06g004130 Solanum pennellii HOM05D006913 ORTHO05D008720 1.8e-57 226.9 196 64.3
FAN19G0677 Fragaria x ananassa HOM05D006913 ORTHO05D008720 3.0e-57 226.1 219 57.5
PSO170G2504 Papaver somniferum HOM05D006913 ORTHO05D008720 3.0e-57 226.1 199 63.8
MBI18_g09652_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 3.9e-57 225.7 184 67.9
THA.LOC104801315 Tarenaya hassleriana HOM05D006913 ORTHO05D008720 5.1e-57 225.3 141 81.6
FAN26G0114 Fragaria x ananassa HOM05D006913 ORTHO05D008720 1.9e-56 223.4 219 57.1
AT4G01900 Arabidopsis thaliana HOM05D006913 ORTHO05D008720 2.5e-56 223.0 189 66.1
arahy.Tifrunner.gnm1.ann1.6PPK8V Arachis hypogaea HOM05D006913 ORTHO05D008720 2.5e-56 223.0 144 81.2
MBI18_g11536_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 2.5e-56 223.0 145 78.6
AL6G51370 Arabidopsis lyrata HOM05D006913 ORTHO05D008720 3.3e-56 222.6 138 81.2
CiPaw.08G086000 Carya illinoinensis HOM05D006913 ORTHO05D008720 3.3e-56 222.6 189 68.8
Sp6g01770 Schrenkiella parvula HOM05D006913 ORTHO05D008720 3.3e-56 222.6 140 81.4
TPR.G4038 Trifolium pratense HOM05D006913 ORTHO05D008720 3.3e-56 222.6 184 66.3
Aa31LG5G1440 Aethionema arabicum HOM05D006913 ORTHO05D008720 4.3e-56 222.2 191 63.9
Thhalv10028983m.g Eutrema salsugineum HOM05D006913 ORTHO05D008720 4.3e-56 222.2 188 66.0
VMungo1383G0882 Vigna mungo HOM05D006913 ORTHO05D008720 5.6e-56 221.9 184 66.3
CAN.G1280.40 Capsicum annuum HOM05D006913 ORTHO05D008720 9.6e-56 221.1 140 79.3
Medtr7g109970 Medicago truncatula HOM05D006913 ORTHO05D008720 9.6e-56 221.1 177 68.4
Sc05g0000220 Simmondsia chinensis HOM05D006913 ORTHO05D008720 1.3e-55 220.7 175 65.1
HPP92_002654 Vanilla planifolia HOM05D006913 ORTHO05D008720 1.6e-55 220.3 180 67.8
MSTRG.21716 Avicennia marina HOM05D006913 ORTHO05D008720 2.8e-55 219.5 195 62.6
Glyma.03G222100 Glycine max HOM05D006913 ORTHO05D008720 2.8e-55 219.5 165 72.7
BcaB01g02398 Brassica carinata HOM05D006913 ORTHO05D008720 6.2e-55 218.4 140 79.3
A03p31400 Brassica napus HOM05D006913 ORTHO05D008720 8.1e-55 218.0 140 79.3
ATR0693G068 Amborella trichopoda HOM05D006913 ORTHO05D008720 1.8e-54 216.9 140 76.4
Psat3g018680 Pisum sativum HOM05D006913 ORTHO05D008720 4.0e-54 215.7 133 82.0
BcaC01g06792 Brassica carinata HOM05D006913 ORTHO05D008720 1.5e-53 213.8 140 77.9
C03p38310 Brassica napus HOM05D006913 ORTHO05D008720 1.5e-53 213.8 140 77.9
BolC3t16112H Brassica oleracea HOM05D006913 ORTHO05D008720 1.5e-53 213.8 140 77.9
BraA03t12321Z Brassica rapa HOM05D006913 ORTHO05D008720 2.6e-53 213.0 189 63.5
Peaxi162Scf00058g00218 Petunia axillaris HOM05D006913 ORTHO05D008720 3.4e-53 212.6 179 67.6
CDE11G0810 Ceratophyllum demersum HOM05D006913 ORTHO05D008720 9.9e-53 211.1 158 67.7
Rhsim01G0292800 Rhododendron simsii HOM05D006913 ORTHO05D008720 2.2e-52 209.9 162 70.4
unitig_578.g16634 Utricularia gibba HOM05D006913 ORTHO05D008720 2.2e-52 209.9 189 61.4
Nitab4.5_0000222g0190 Nicotiana tabacum HOM05D006913 ORTHO05D008720 6.4e-52 208.4 155 71.0
DCAR_002917 Daucus carota HOM05D006913 ORTHO05D008720 1.1e-51 207.6 181 62.4
Os05g0133100 Oryza sativa ssp. japonica HOM05D006913 ORTHO05D008720 5.5e-51 205.3 143 74.1
Sabra02G0164300 Salix brachista HOM05D006913 ORTHO05D008720 9.3e-51 204.5 217 56.2
BcaB01g02393 Brassica carinata HOM05D006913 ORTHO05D008720 1.2e-50 204.1 125 82.4
arahy.Tifrunner.gnm1.ann1.IRZ7G5 Arachis hypogaea HOM05D006913 ORTHO05D008720 2.7e-50 203.0 146 76.7
Cc01_g21970 Coffea canephora HOM05D006913 ORTHO05D008720 7.9e-50 201.4 136 75.0
Pp3c4_15530 Physcomitrium patens HOM05D006913 ORTHO05D008720 3.7e-47 192.6 133 72.2
Mapoly0061s0127 Marchantia polymorpha HOM05D006913 ORTHO05D008720 6.2e-47 191.8 128 72.7
COL.COLO4_23180 Corchorus olitorius HOM05D006913 ORTHO05D008720 9.3e-43 177.9 102 89.2
SGA_v2.0_scaffold80G25710 Striga asiatica HOM05D006913 ORTHO05D008720 2.7e-42 176.4 167 59.9
Eucgr.H00899 Eucalyptus grandis HOM05D006913 ORTHO05D008720 1.1e-40 171.0 146 66.4
AUR62024592 Chenopodium quinoa HOM05D006913 ORTHO05D008720 1.9e-40 170.2 170 58.2
AagrBONN_evm.TU.Sc2ySwM_228.182 Anthoceros agrestis HOM05D006913 ORTHO05D008720 3.3e-40 169.5 123 68.3
Ca_09230_v3 Cicer arietinum L. HOM05D006913 ORTHO05D008720 2.8e-39 166.4 97 87.6
vmacro15097 Vaccinium macrocarpon HOM05D006913 ORTHO05D008720 3.7e-39 166.0 104 81.7
Lj1C13T3 Lonicera japonica HOM05D006913 ORTHO05D008720 6.3e-39 165.2 102 84.3
Solyc01g015000.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 9.0e-38 161.4 106 80.2
SEGI_19322 Sequoiadendron giganteum HOM05D006913 ORTHO05D008720 1.5e-37 160.6 103 80.6
Oeu038057.1 Olea europaea HOM05D006913 ORTHO05D008720 7.9e-34 148.3 194 46.9
SMO364G0946 Selaginella moellendorffii HOM05D006913 ORTHO05D008720 1.4e-33 147.5 101 74.3
FAN23G2363 Fragaria x ananassa HOM05D000049 ORTHO05D000027 1.8e-33 147.1 99 77.8
Hund09668 Selenicereus undatus HOM05D006913 ORTHO05D008720 1.7e-31 140.6 181 48.6
Phvul.001G215500 Phaseolus vulgaris HOM05D006913 ORTHO05D008720 4.8e-31 139.0 91 74.7
Duzib211G0548 Durio zibethinus HOM05D006913 ORTHO05D008720 1.8e-30 137.1 102 70.6
Cre07.g357350 Chlamydomonas reinhardtii HOM05D006913 ORTHO05D008720 2.4e-30 136.7 160 46.2
MCO04G045 Micromonas commoda HOM05D006913 ORTHO05D008720 2.6e-29 133.3 157 46.5
CARHR249910 Cardamine hirsuta HOM05D006913 ORTHO05D008720 3.8e-28 129.4 79 86.1
Eucgr.L01805 Eucalyptus grandis HOM05D006913 ORTHO05D008720 6.1e-26 122.1 127 54.3
GSVIVG01010608001 Vitis vinifera HOM05D006913 ORTHO05D008720 2.3e-25 120.2 71 88.7
GSVIVG01037028001 Vitis vinifera HOM05D006913 ORTHO05D008720 2.3e-25 120.2 71 88.7
Hma1.2p1_3252F.1_g334540 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 1.2e-21 107.8 137 49.6
Nitab4.5_0001013g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 1.3e-20 104.4 79 65.8
HPP92_027922 Vanilla planifolia HOM05D006913 ORTHO05D008720 1.7e-20 104.0 109 54.1
HPP92_027923 Vanilla planifolia HOM05D006913 ORTHO05D008720 8.5e-20 101.7 63 82.5
Haze_27360 Corylus avellana HOM05D006913 ORTHO05D008720 3.7e-15 86.3 109 38.5
C09p01450 Brassica napus HOM05D006913 ORTHO05D008720 1.2e-10 71.2 39 84.6
BolC9t53077H Brassica oleracea HOM05D006913 ORTHO05D008720 1.2e-10 71.2 39 84.6


User provided reference genes

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