Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0008486 Sechium edule HOM05D005608 ORTHO05D007543 6.1e-171 604.0 286 100.0
Sed0024564 Sechium edule HOM05D005608 ORTHO05D007543 5.3e-143 511.1 285 83.2
MELO3C026333.2 Cucumis melo HOM05D005608 ORTHO05D007543 5.9e-142 507.7 286 81.8
Gohir.A01G193800 Gossypium hirsutum HOM05D005608 ORTHO05D007543 1.3e-141 506.5 284 81.7
Sed0023334 Sechium edule HOM05D005608 ORTHO05D007543 2.9e-141 505.4 286 81.5
CsaV3_4G027510 Cucumis sativus L. HOM05D005608 ORTHO05D007543 6.5e-141 504.2 286 81.1
Thecc.05G148100 Theobroma cacao HOM05D005608 ORTHO05D007543 1.1e-140 503.4 284 81.7
Gohir.D01G184100 Gossypium hirsutum HOM05D005608 ORTHO05D007543 9.4e-140 500.4 284 81.7
Gorai.002G227600 Gossypium raimondii HOM05D005608 ORTHO05D007543 9.4e-140 500.4 284 81.7
QL07p003736 Quercus lobata HOM05D005608 ORTHO05D007543 3.6e-139 498.4 284 80.6
CiPaw.09G040300 Carya illinoinensis HOM05D005608 ORTHO05D007543 1.0e-138 496.9 284 80.3
EL10Ac3g07137 Beta vulgaris HOM05D005608 ORTHO05D007543 1.8e-138 496.1 284 78.5
Duzib106G2070 Durio zibethinus HOM05D005608 ORTHO05D007543 2.3e-138 495.7 284 80.6
Manes.08G052000 Manihot esculenta HOM05D005608 ORTHO05D007543 2.0e-137 492.7 284 80.3
Prupe.7G053400 Prunus persica HOM05D005608 ORTHO05D007543 2.0e-137 492.7 288 78.8
PGSC0003DMG401012699 Solanum tuberosum HOM05D005608 ORTHO05D007543 2.0e-137 492.7 284 78.9
TWI77G0221 Tripterygium wilfordii HOM05D005608 ORTHO05D007543 2.0e-137 492.7 284 78.5
Atru.chr1.1230 Acer truncatum HOM05D005608 ORTHO05D007543 2.6e-137 492.3 284 79.2
Nitab4.5_0001618g0150 Nicotiana tabacum HOM05D005608 ORTHO05D007543 3.4e-137 491.9 284 79.2
CSS0026365 Camellia sinensis var. sinensis HOM05D005608 ORTHO05D007543 9.8e-137 490.3 284 77.8
Ciclev10005572m.g Citrus clementina HOM05D005608 ORTHO05D007543 2.2e-136 489.2 284 79.2
Potri.006G047000 Populus trichocarpa HOM05D005608 ORTHO05D007543 3.7e-136 488.4 284 77.5
Solyc04g016360.3 Solanum lycopersicum HOM05D005608 ORTHO05D007543 3.7e-136 488.4 284 78.9
CAN.G676.7 Capsicum annuum HOM05D005608 ORTHO05D007543 4.8e-136 488.0 284 78.2
Nn2g15128 Nelumbo nucifera HOM05D005608 ORTHO05D007543 4.8e-136 488.0 281 79.4
GSVIVG01033232001 Vitis vinifera HOM05D005608 ORTHO05D007543 6.3e-136 487.6 284 77.8
Eucgr.K02019 Eucalyptus grandis HOM05D005608 ORTHO05D007543 8.3e-136 487.3 286 77.6
PSO384G3225 Papaver somniferum HOM05D005608 ORTHO05D007543 1.1e-135 486.9 284 78.2
Nitab4.5_0000826g0060 Nicotiana tabacum HOM05D005608 ORTHO05D007543 1.8e-135 486.1 284 78.5
PSO339G6269 Papaver somniferum HOM05D005608 ORTHO05D007543 1.8e-135 486.1 284 78.2
Sabra06G0032700 Salix brachista HOM05D005608 ORTHO05D007543 1.8e-135 486.1 284 77.5
Sopen04g008450 Solanum pennellii HOM05D005608 ORTHO05D007543 2.4e-135 485.7 284 78.2
Aqoxy2G00245 Aquilegia oxysepala HOM05D005608 ORTHO05D007543 3.1e-135 485.3 284 79.6
RcHm_v2.0_Chr3g0483631 Rosa chinensis HOM05D005608 ORTHO05D007543 3.1e-135 485.3 284 76.4
Lj5g0018305 Lotus japonicus HOM05D005608 ORTHO05D007543 2.0e-134 482.6 285 77.2
TAR369G0715 Trochodendron aralioides HOM05D005608 ORTHO05D007543 2.7e-134 482.3 283 78.1
Hund24681 Selenicereus undatus HOM05D005608 ORTHO05D007543 3.5e-134 481.9 284 77.5
Haze_19791 Corylus avellana HOM05D005608 ORTHO05D007543 4.5e-134 481.5 284 78.5
Haze_19795 Corylus avellana HOM05D005608 ORTHO05D007543 4.5e-134 481.5 284 78.5
Hma1.2p1_0110F.1_g052840 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 4.5e-134 481.5 284 77.1
Hma1.2p1_1997F.1_g310445 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 4.5e-134 481.5 284 77.1
MD14G1077300 Malus domestica HOM05D005608 ORTHO05D007543 4.5e-134 481.5 286 76.2
vmacro21968 Vaccinium macrocarpon HOM05D005608 ORTHO05D007543 4.5e-134 481.5 284 76.1
Phvul.007G250500 Phaseolus vulgaris HOM05D005608 ORTHO05D007543 1.0e-133 480.3 284 75.4
Oeu017928.1 Olea europaea HOM05D005608 ORTHO05D007543 1.7e-133 479.6 281 76.9
Actinidia39202 Actinidia chinensis HOM05D005608 ORTHO05D007543 3.8e-133 478.4 284 76.4
Sc19g0008540 Simmondsia chinensis HOM05D005608 ORTHO05D007543 5.0e-133 478.0 284 76.4
Cfa016779 Carpinus fangiana HOM05D005608 ORTHO05D007543 6.5e-133 477.6 284 78.2
Lj1A1125T63 Lonicera japonica HOM05D005608 ORTHO05D007543 6.5e-133 477.6 287 77.4
Peaxi162Scf00130g00829 Petunia axillaris HOM05D005608 ORTHO05D007543 6.5e-133 477.6 284 76.8
TAR369G0194 Trochodendron aralioides HOM05D005608 ORTHO05D007543 8.5e-133 477.2 283 77.4
DCAR_013613 Daucus carota HOM05D005608 ORTHO05D007543 1.5e-132 476.5 283 75.6
CANSAT80G2626 Cannabis sativa HOM05D005608 ORTHO05D007543 2.5e-132 475.7 287 76.3
FAN05G0975 Fragaria x ananassa HOM05D005608 ORTHO05D007543 2.5e-132 475.7 287 75.3
VMungo0720G2960 Vigna mungo HOM05D005608 ORTHO05D007543 3.2e-132 475.3 284 75.0
FAN02G1028 Fragaria x ananassa HOM05D005608 ORTHO05D007543 7.2e-132 474.2 285 74.7
Glyma.10G106900 Glycine max HOM05D005608 ORTHO05D007543 7.2e-132 474.2 283 75.6
ClCG04G003700 Citrullus lanatus HOM05D005608 ORTHO05D007543 9.4e-132 473.8 286 78.0
FvH4_6g24520 Fragaria vesca HOM05D005608 ORTHO05D007543 1.6e-131 473.0 284 74.6
HanXRQChr04g0125051 Helianthus annuus HOM05D005608 ORTHO05D007543 8.0e-131 470.7 281 76.9
MSTRG.26133 Avicennia marina HOM05D005608 ORTHO05D007543 1.0e-130 470.3 283 76.0
CANSAT80G0897 Cannabis sativa HOM05D005608 ORTHO05D007543 1.0e-130 470.3 292 75.3
TAR633G2234 Trochodendron aralioides HOM05D005608 ORTHO05D007543 1.4e-130 469.9 284 75.4
Cc06_g18100 Coffea canephora HOM05D005608 ORTHO05D007543 1.8e-130 469.5 282 76.2
Lalb_Chr06g0173501 Lupinus albus HOM05D005608 ORTHO05D007543 1.8e-130 469.5 285 76.1
Glyma.02G186700 Glycine max HOM05D005608 ORTHO05D007543 3.0e-130 468.8 284 75.0
AUR62026096 Chenopodium quinoa HOM05D005608 ORTHO05D007543 4.0e-130 468.4 301 72.1
Aa31LG1G23580 Aethionema arabicum HOM05D005608 ORTHO05D007543 5.2e-130 468.0 285 76.1
Migut.J01725 Erythranthe guttata HOM05D005608 ORTHO05D007543 1.2e-129 466.8 281 75.8
Rhsim03G0028900 Rhododendron simsii HOM05D005608 ORTHO05D007543 1.2e-129 466.8 288 74.3
SGA_v2.0_scaffold273G46432 Striga asiatica HOM05D005608 ORTHO05D007543 5.7e-129 464.5 272 76.5
arahy.Tifrunner.gnm1.ann1.RCN63F Arachis hypogaea HOM05D005608 ORTHO05D007543 7.5e-129 464.2 283 76.0
FAN14G1555 Fragaria x ananassa HOM05D005608 ORTHO05D007543 7.5e-129 464.2 287 73.2
SalBow6G4364 Salvia bowleyana HOM05D005608 ORTHO05D007543 1.3e-128 463.4 281 74.7
Sp4g23810 Schrenkiella parvula HOM05D005608 ORTHO05D007543 1.7e-128 463.0 284 75.0
THA.LOC104801987 Tarenaya hassleriana HOM05D005608 ORTHO05D007543 1.7e-128 463.0 284 75.4
MSTRG.19838 Avicennia marina HOM05D005608 ORTHO05D007543 2.8e-128 462.2 281 74.7
BcaB01g03463 Brassica carinata HOM05D005608 ORTHO05D007543 6.3e-128 461.1 284 74.6
CARHR136660 Cardamine hirsuta HOM05D005608 ORTHO05D007543 6.3e-128 461.1 284 74.6
Thhalv10017045m.g Eutrema salsugineum HOM05D005608 ORTHO05D007543 3.1e-127 458.8 284 73.9
BcaNung04068 Brassica carinata HOM05D005608 ORTHO05D007543 9.2e-127 457.2 284 73.9
TPR.G19657 Trifolium pratense HOM05D005608 ORTHO05D007543 1.6e-126 456.4 284 73.6
BcaC01g05330 Brassica carinata HOM05D005608 ORTHO05D007543 2.0e-126 456.1 284 73.6
Medtr4g008660 Medicago truncatula HOM05D005608 ORTHO05D007543 2.0e-126 456.1 278 75.5
A03p23310 Brassica napus HOM05D005608 ORTHO05D007543 3.5e-126 455.3 284 73.6
BolC3t15154H Brassica oleracea HOM05D005608 ORTHO05D007543 3.5e-126 455.3 284 73.6
BraA03t11549Z Brassica rapa HOM05D005608 ORTHO05D007543 3.5e-126 455.3 284 73.6
C03p27830 Brassica napus HOM05D005608 ORTHO05D007543 5.9e-126 454.5 284 73.6
AL4G39630 Arabidopsis lyrata HOM05D005608 ORTHO05D007543 7.7e-126 454.1 284 73.2
AT2G41530 Arabidopsis thaliana HOM05D005608 ORTHO05D007543 7.7e-126 454.1 278 74.8
C04p02790 Brassica napus HOM05D005608 ORTHO05D007543 1.3e-125 453.4 285 74.7
BolC4t21919H Brassica oleracea HOM05D005608 ORTHO05D007543 1.3e-125 453.4 285 74.7
A05p02350 Brassica napus HOM05D005608 ORTHO05D007543 2.9e-125 452.2 285 74.4
Medtr1g052175 Medicago truncatula HOM05D005608 ORTHO05D007543 2.9e-125 452.2 278 74.8
Peaxi162Scf00130g00828 Petunia axillaris HOM05D005608 ORTHO05D007543 3.8e-125 451.8 284 74.6
ECA236G2378 Erigeron canadensis HOM05D005608 ORTHO05D007543 6.6e-125 451.1 270 75.6
BraA05t19229Z Brassica rapa HOM05D005608 ORTHO05D007543 8.6e-125 450.7 285 74.4
arahy.Tifrunner.gnm1.ann1.QZL5XH Arachis hypogaea HOM05D005608 ORTHO05D007543 1.1e-124 450.3 297 71.7
CDE05G0378 Ceratophyllum demersum HOM05D005608 ORTHO05D007543 1.1e-124 450.3 281 71.2
Nitab4.5_0000636g0050 Nicotiana tabacum HOM05D005608 ORTHO05D007543 2.5e-124 449.1 284 72.5
Carub.0004s2382 Capsella rubella HOM05D005608 ORTHO05D007543 9.5e-124 447.2 284 72.5
HPP92_001434 Vanilla planifolia HOM05D005608 ORTHO05D007543 4.7e-123 444.9 280 71.4
Ca_12257_v3 Cicer arietinum L. HOM05D005608 ORTHO05D007543 6.1e-123 444.5 278 74.5
Lsat_1_v5_gn_8_82180 Lactuca sativa HOM05D005608 ORTHO05D007543 2.3e-122 442.6 329 64.7
Ca_12243_v3 Cicer arietinum L. HOM05D005608 ORTHO05D007543 5.2e-122 441.4 282 73.8
ATR0721G011 Amborella trichopoda HOM05D005608 ORTHO05D007543 3.4e-121 438.7 275 71.6
SEGI_13354 Sequoiadendron giganteum HOM05D005608 ORTHO05D007543 2.4e-119 432.6 278 71.2
Os01g0939700 Oryza sativa ssp. japonica HOM05D005608 ORTHO05D007543 2.0e-118 429.5 277 70.0
Cpa.g.sc182.15 Carica papaya HOM05D005608 ORTHO05D007543 1.3e-117 426.8 246 78.9
Eucgr.K01713 Eucalyptus grandis HOM05D005608 ORTHO05D007543 4.4e-113 411.8 274 69.0
AUR62024510 Chenopodium quinoa HOM05D005608 ORTHO05D007543 1.2e-110 403.7 235 78.3
unitig_21.g20519 Utricularia gibba HOM05D005608 ORTHO05D007543 1.7e-109 399.8 287 68.6
MBI19_g29889_MAGBIO Magnolia biondii HOM05D005608 ORTHO05D007543 5.0e-109 398.3 233 75.5
Pp3c11_8660 Physcomitrium patens HOM05D005608 ORTHO05D007543 8.3e-104 380.9 279 61.6
MD12G1082500 Malus domestica HOM05D005608 ORTHO05D007543 2.3e-101 372.9 225 76.9
Mapoly0020s0136 Marchantia polymorpha HOM05D005608 ORTHO05D007543 1.4e-98 363.6 279 60.2
CBR_g12387 Chara braunii HOM05D005608 ORTHO05D007543 1.3e-96 357.1 278 60.1
SMO174G0027 Selaginella moellendorffii HOM05D005608 ORTHO05D007543 1.4e-95 353.6 281 60.5
Dinv39657 Davidia involucrata HOM05D005608 ORTHO05D007543 3.5e-94 349.0 196 81.1
Zm00001eb363240 Zea mays HOM05D005608 ORTHO05D007543 1.4e-90 337.0 219 70.8
COL.COLO4_32782 Corchorus olitorius HOM05D005608 ORTHO05D007543 3.9e-85 318.9 272 58.5
Cre03.g158800 Chlamydomonas reinhardtii HOM05D005608 ORTHO05D007543 2.8e-83 312.8 281 53.7
SalBow6G3992 Salvia bowleyana HOM05D005608 ORTHO05D007543 1.0e-77 294.3 288 53.1
Psat6g091560 Pisum sativum HOM05D005608 ORTHO05D007543 2.5e-76 289.7 171 78.9
TPR.G19661 Trifolium pratense HOM05D005608 ORTHO05D007543 9.0e-74 281.2 166 77.7
Haze_27232 Corylus avellana HOM05D005608 ORTHO05D007543 1.1e-71 274.2 308 45.1
Haze_26706 Corylus avellana HOM05D005608 ORTHO05D007543 1.2e-62 244.2 277 44.8
MCO09G089 Micromonas commoda HOM05D000219 ORTHO05D000226 1.7e-56 223.8 277 44.8
PRCOL_00003320 Prasinoderma coloniale HOM05D000219 ORTHO05D000226 1.7e-56 223.8 283 43.8
Medtr0931s0010 Medicago truncatula HOM05D005608 ORTHO05D044358 1.6e-54 217.2 231 48.5
Medtr1g052165 Medicago truncatula HOM05D005608 ORTHO05D048895 6.9e-42 175.3 114 69.3
TPR.G23055 Trifolium pratense HOM05D005608 ORTHO05D048895 6.7e-37 158.7 103 69.9
Zm00001eb010250 Zea mays HOM05D005608 ORTHO05D007543 1.4e-18 97.8 78 57.7
SEGI_35043 Sequoiadendron giganteum HOM05D005608 ORTHO05D384886 1.9e-15 87.4 71 59.2
Zm00001eb141600 Zea mays HOM05D005608 ORTHO05D007543 1.0e-13 81.6 61 57.4
Pp3c1_10050 Physcomitrium patens HOM05D005608 ORTHO05D319324 5.6e-07 59.3 56 48.2


User provided reference genes

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