Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0008467 Sechium edule HOM05D006718 ORTHO05D008492 8.6e-305 1049.7 593 100.0
ClCG08G008520 Citrullus lanatus HOM05D006718 ORTHO05D008492 1.5e-203 713.4 614 71.2
MELO3C019922.2 Cucumis melo HOM05D006718 ORTHO05D008492 6.4e-191 671.4 616 68.7
CsaV3_6G004530 Cucumis sativus L. HOM05D006718 ORTHO05D008492 1.7e-188 663.3 616 68.7
QL04p050382 Quercus lobata HOM05D006718 ORTHO05D008492 1.7e-63 248.1 666 40.2
Haze_03406 Corylus avellana HOM05D006718 ORTHO05D008492 7.3e-62 242.7 587 41.4
MD02G1263300 Malus domestica HOM05D006718 ORTHO05D008492 3.6e-61 240.4 610 36.1
Prupe.2G061400 Prunus persica HOM05D006718 ORTHO05D008492 5.3e-60 236.5 593 39.8
MD07G1054700 Malus domestica HOM05D006718 ORTHO05D008492 2.0e-59 234.6 609 36.3
Cfa010452 Carpinus fangiana HOM05D006718 ORTHO05D008492 2.9e-58 230.7 632 36.4
FAN28G2084 Fragaria x ananassa HOM05D006718 ORTHO05D008492 2.7e-56 224.2 608 39.5
FvH4_1g30390 Fragaria vesca HOM05D006718 ORTHO05D008492 3.9e-55 220.3 611 39.0
Atru.chr12.1182 Acer truncatum HOM05D006718 ORTHO05D008492 1.5e-54 218.4 353 46.5
RcHm_v2.0_Chr3g0490591 Rosa chinensis HOM05D006718 ORTHO05D008492 9.6e-54 215.7 608 37.7
FAN19G2415 Fragaria x ananassa HOM05D006718 ORTHO05D008492 1.6e-53 214.9 610 38.7
FAN23G2020 Fragaria x ananassa HOM05D006718 ORTHO05D008492 4.8e-53 213.4 614 38.6
Dinv24591 Davidia involucrata HOM05D006718 ORTHO05D008492 6.9e-52 209.5 503 37.8
TWI38G0042 Tripterygium wilfordii HOM05D006718 ORTHO05D008492 9.0e-52 209.1 523 38.4
CiPaw.13G047100 Carya illinoinensis HOM05D006718 ORTHO05D008492 2.0e-51 208.0 500 38.0
Potri.010G246500 Populus trichocarpa HOM05D006718 ORTHO05D008492 3.9e-47 193.7 669 34.5
Ciclev10015184m.g Citrus clementina HOM05D006718 ORTHO05D008492 8.7e-47 192.6 508 35.8
Sabra10G0192200 Salix brachista HOM05D006718 ORTHO05D008492 8.7e-47 192.6 624 36.4
Glyma.14G084400 Glycine max HOM05D006718 ORTHO05D008492 1.1e-46 192.2 650 33.8
Eucgr.J00311 Eucalyptus grandis HOM05D006718 ORTHO05D008492 5.6e-46 189.9 565 34.0
Manes.07G082900 Manihot esculenta HOM05D006718 ORTHO05D008492 1.6e-45 188.3 594 34.3
Glyma.17G240500 Glycine max HOM05D006718 ORTHO05D008492 2.8e-45 187.6 662 34.3
Nn2g14019 Nelumbo nucifera HOM05D006718 ORTHO05D008492 6.2e-45 186.4 648 31.8
VMungo0647G0438 Vigna mungo HOM05D006718 ORTHO05D008492 5.3e-44 183.3 515 34.0
Phvul.011G216700 Phaseolus vulgaris HOM05D006718 ORTHO05D008492 2.6e-43 181.0 606 33.5
TAR369G0954 Trochodendron aralioides HOM05D006718 ORTHO05D008492 4.5e-43 180.3 610 33.4
Lalb_Chr25g0284721 Lupinus albus HOM05D006718 ORTHO05D008492 7.6e-43 179.5 572 36.2
CANSAT56G0860 Cannabis sativa HOM05D006718 ORTHO05D008492 1.0e-42 179.1 572 35.0
Duzib128G0030 Durio zibethinus HOM05D006718 ORTHO05D008492 2.2e-42 177.9 311 46.0
Thecc.10G129200 Theobroma cacao HOM05D006718 ORTHO05D008492 2.5e-41 174.5 546 37.7
Lj7A493G35 Lonicera japonica HOM05D006718 ORTHO05D008492 3.5e-40 170.6 365 38.6
Gohir.D06G179500 Gossypium hirsutum HOM05D006718 ORTHO05D008492 4.6e-40 170.2 287 43.9
Gorai.010G210100 Gossypium raimondii HOM05D006718 ORTHO05D008492 4.6e-40 170.2 288 43.8
Lj3g0008993 Lotus japonicus HOM05D006718 ORTHO05D008492 4.6e-40 170.2 633 34.3
Carub.0006s1670 Capsella rubella HOM05D006718 ORTHO05D008492 6.1e-40 169.9 454 35.5
Sc09g0004890 Simmondsia chinensis HOM05D006718 ORTHO05D008492 2.3e-39 167.9 513 35.1
Ah.06g191200 Amaranthus hybridus HOM05D006718 ORTHO05D008492 2.5e-38 164.5 263 41.4
AL6G29690 Arabidopsis lyrata HOM05D006718 ORTHO05D008492 4.3e-38 163.7 504 31.0
Ca_03601_v3 Cicer arietinum L. HOM05D006718 ORTHO05D008492 5.7e-38 163.3 590 31.4
Hund06826 Selenicereus undatus HOM05D006718 ORTHO05D008492 7.4e-38 162.9 569 35.1
Thhalv10013325m.g Eutrema salsugineum HOM05D006718 ORTHO05D008492 1.3e-37 162.2 530 32.5
MBI15_g36944_MAGBIO Magnolia biondii HOM05D006718 ORTHO05D008492 1.3e-37 162.2 457 33.9
Sabra08G0007500 Salix brachista HOM05D006718 ORTHO05D008492 3.7e-37 160.6 607 34.4
BolC9t58690H Brassica oleracea HOM05D006718 ORTHO05D008492 4.8e-37 160.2 461 34.7
Gohir.A06G171400 Gossypium hirsutum HOM05D006718 ORTHO05D008492 4.8e-37 160.2 428 35.7
AT5G18440 Arabidopsis thaliana HOM05D006718 ORTHO05D008492 6.3e-37 159.8 402 34.1
CSS0042038 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 8.2e-37 159.5 291 44.7
PGR044G1203 Punica granatum HOM05D006718 ORTHO05D008492 2.4e-36 157.9 549 36.1
THA.LOC104811338 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 6.9e-36 156.4 431 33.6
EL10Ac4g08778 Beta vulgaris HOM05D006718 ORTHO05D008492 4.5e-35 153.7 539 34.3
C09p58250 Brassica napus HOM05D006718 ORTHO05D008492 1.3e-34 152.1 436 34.4
DCAR_006628 Daucus carota HOM05D006718 ORTHO05D008492 1.3e-34 152.1 240 43.8
SGA_v2.0_scaffold196G40987 Striga asiatica HOM05D006718 ORTHO05D008492 1.3e-34 152.1 555 31.2
Sp6g25880 Schrenkiella parvula HOM05D006718 ORTHO05D008492 2.9e-34 151.0 458 35.2
AUR62034103 Chenopodium quinoa HOM05D006718 ORTHO05D008492 5.0e-34 150.2 617 35.2
Aqoxy1G00086 Aquilegia oxysepala HOM05D006718 ORTHO05D008492 3.2e-33 147.5 632 31.8
CAN.G134.56 Capsicum annuum HOM05D006718 ORTHO05D008492 4.2e-33 147.1 526 36.7
AUR62014308 Chenopodium quinoa HOM05D006718 ORTHO05D008492 5.5e-33 146.7 615 31.9
Nitab4.5_0005056g0030 Nicotiana tabacum HOM05D006718 ORTHO05D008492 7.2e-33 146.4 567 31.0
COL.COLO4_28900 Corchorus olitorius HOM05D006718 ORTHO05D008492 9.4e-33 146.0 231 44.2
Potri.008G012250 Populus trichocarpa HOM05D006718 ORTHO05D008492 9.4e-33 146.0 384 33.6
Nitab4.5_0001611g0090 Nicotiana tabacum HOM05D006718 ORTHO05D008492 1.6e-32 145.2 567 31.9
PSO339G3483 Papaver somniferum HOM05D006718 ORTHO05D008492 2.7e-32 144.4 522 32.0
HPP92_007508 Vanilla planifolia HOM05D006718 ORTHO05D008492 4.6e-32 143.7 498 33.1
A10p21140 Brassica napus HOM05D006718 ORTHO05D008492 7.9e-32 142.9 436 35.3
Sopen01g040630 Solanum pennellii HOM05D006718 ORTHO05D008492 7.9e-32 142.9 577 34.3
BcaC04g18692 Brassica carinata HOM05D006718 ORTHO05D008492 1.4e-31 142.1 242 41.3
Medtr2g067220 Medicago truncatula HOM05D006718 ORTHO05D008492 1.4e-31 142.1 606 33.5
Solyc01g096920.3 Solanum lycopersicum HOM05D006718 ORTHO05D008492 3.0e-31 141.0 577 34.1
GSVIVG01027215001 Vitis vinifera HOM05D006718 ORTHO05D008492 3.9e-31 140.6 456 35.1
MSTRG.5086 Avicennia marina HOM05D006718 ORTHO05D008492 5.1e-31 140.2 548 32.5
SalBow4G0879 Salvia bowleyana HOM05D006718 ORTHO05D008492 6.7e-31 139.8 490 31.8
BcaB08g36679 Brassica carinata HOM05D006718 ORTHO05D008492 2.0e-30 138.3 394 34.3
CARHR194580 Cardamine hirsuta HOM05D006718 ORTHO05D008492 2.5e-30 137.9 275 38.9
Aa31LG11G11170 Aethionema arabicum HOM05D006718 ORTHO05D008492 5.7e-30 136.7 506 31.6
unitig_899.g15585 Utricularia gibba HOM05D006718 ORTHO05D008492 5.7e-30 136.7 301 35.9
Zm00001eb149940 Zea mays HOM05D006718 ORTHO05D008492 5.7e-30 136.7 234 36.8
Os01g0814000 Oryza sativa ssp. japonica HOM05D006718 ORTHO05D008492 7.4e-30 136.3 243 37.4
PSO384G1654 Papaver somniferum HOM05D006718 ORTHO05D008492 9.7e-30 136.0 521 31.1
Peaxi162Scf00647g00315 Petunia axillaris HOM05D006718 ORTHO05D008492 2.8e-29 134.4 558 31.0
ATR0068G071 Amborella trichopoda HOM05D006718 ORTHO05D008492 6.3e-29 133.3 297 42.8
PGSC0003DMG400027524 Solanum tuberosum HOM05D006718 ORTHO05D008492 1.8e-28 131.7 576 34.0
ECA232G4797 Erigeron canadensis HOM05D006718 ORTHO05D008492 1.2e-27 129.0 618 29.9
Migut.N01880 Erythranthe guttata HOM05D006718 ORTHO05D008492 1.5e-27 128.6 246 40.2
Migut.O00435 Erythranthe guttata HOM05D006718 ORTHO05D008492 1.5e-27 128.6 573 32.8
FAN26G3384 Fragaria x ananassa HOM05D006718 ORTHO05D008492 1.3e-26 125.6 387 35.9
Cc02_g32070 Coffea canephora HOM05D006718 ORTHO05D008492 1.1e-25 122.5 626 29.2
TPR.G33809 Trifolium pratense HOM05D006718 ORTHO05D008492 1.4e-25 122.1 652 28.4
BraA10t44177Z Brassica rapa HOM05D006718 ORTHO05D008492 1.2e-24 119.0 436 32.8
Cpa.g.sc163.26 Carica papaya HOM05D006718 ORTHO05D008492 1.2e-24 119.0 227 39.6
HanXRQChr09g0250361 Helianthus annuus HOM05D006718 ORTHO05D008492 2.6e-22 111.3 527 30.2
Lsat_1_v5_gn_4_139420 Lactuca sativa HOM05D006718 ORTHO05D008492 2.6e-22 111.3 652 29.1
Rhsim01G0121600 Rhododendron simsii HOM05D006718 ORTHO05D008492 9.7e-22 109.4 647 31.1
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 9.7e-22 109.4 619 26.8
vmacro20846 Vaccinium macrocarpon HOM05D006718 ORTHO05D008492 2.0e-19 101.7 464 30.4
Mapoly0025s0136 Marchantia polymorpha HOM05D006718 ORTHO05D008492 1.1e-14 85.9 271 28.8
Pp3c27_4140 Physcomitrium patens HOM05D006718 ORTHO05D008492 2.2e-10 71.6 268 26.9
CDE04G2801 Ceratophyllum demersum HOM05D001339 ORTHO05D003609 7.2e-09 66.6 554 26.2
AagrBONN_evm.TU.Sc2ySwM_344.1162 Anthoceros agrestis HOM05D006718 ORTHO05D008492 9.4e-09 66.2 262 26.0
CBR_g22941 Chara braunii HOM05D006718 ORTHO05D008492 1.0e-07 62.8 312 25.0
Peaxi162Scf00558g00016 Petunia axillaris HOM05D006718 ORTHO05D008492 1.4e-07 62.4 181 29.8
A02p04900 Brassica napus HOM05D006718 ORTHO05D008492 2.3e-07 61.6 400 26.5
BcaB05g23323 Brassica carinata HOM05D006718 ORTHO05D008492 4.4e-06 57.4 112 38.4


User provided reference genes

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