Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0008419 Sechium edule HOM05D006325 ORTHO05D007878 1.7e-39 165.6 86 100.0
MELO3C007112.2 Cucumis melo HOM05D006325 ORTHO05D007878 3.7e-23 111.3 80 76.2
CsaV3_6G051960 Cucumis sativus L. HOM05D006325 ORTHO05D007878 1.4e-22 109.4 80 76.2
ClCG01G024840 Citrullus lanatus HOM05D006325 ORTHO05D007878 5.9e-21 104.0 87 70.1
Nitab4.5_0003551g0100 Nicotiana tabacum HOM05D006325 ORTHO05D007878 5.4e-14 80.9 82 53.7
PGSC0003DMG403011204 Solanum tuberosum HOM05D006325 ORTHO05D007878 2.7e-13 78.6 82 51.2
Phvul.002G178300 Phaseolus vulgaris HOM05D006325 ORTHO05D007878 3.5e-13 78.2 80 53.8
Phvul.002G179400 Phaseolus vulgaris HOM05D006325 ORTHO05D007878 3.5e-13 78.2 80 53.8
CAN.G160.11 Capsicum annuum HOM05D006325 ORTHO05D007878 4.5e-13 77.8 83 54.2
Solyc11g020860.1 Solanum lycopersicum HOM05D006325 ORTHO05D007878 1.0e-12 76.6 80 52.5
Potri.011G081001 Populus trichocarpa HOM05D006325 ORTHO05D007878 1.7e-12 75.9 81 51.9
CSS0005985 Camellia sinensis var. sinensis HOM05D006325 ORTHO05D007878 2.3e-12 75.5 80 56.2
Nitab4.5_0003551g0110 Nicotiana tabacum HOM05D006325 ORTHO05D007878 2.3e-12 75.5 79 51.9
PGSC0003DMG402022984 Solanum tuberosum HOM05D006325 ORTHO05D007878 2.3e-12 75.5 82 51.2
CiPaw.10G089300 Carya illinoinensis HOM05D006325 ORTHO05D007878 2.9e-12 75.1 88 52.3
CSS0005499 Camellia sinensis var. sinensis HOM05D006325 ORTHO05D007878 5.0e-12 74.3 80 55.0
Sabra11G0064500 Salix brachista HOM05D006325 ORTHO05D007878 6.6e-12 73.9 81 50.6
RcHm_v2.0_Chr5g0014631 Rosa chinensis HOM05D006325 ORTHO05D007878 8.6e-12 73.6 90 47.8
Nitab4.5_0002611g0130 Nicotiana tabacum HOM05D006325 ORTHO05D007878 1.1e-11 73.2 82 48.8
PGSC0003DMG400011149 Solanum tuberosum HOM05D006325 ORTHO05D007878 1.1e-11 73.2 80 50.0
PGSC0003DMG400009263 Solanum tuberosum HOM05D006325 ORTHO05D007878 1.5e-11 72.8 80 50.0
Lalb_Chr13g0293971 Lupinus albus HOM05D006325 ORTHO05D007878 1.9e-11 72.4 88 50.0
Nn3g20453 Nelumbo nucifera HOM05D006325 ORTHO05D007878 1.9e-11 72.4 81 54.3
Ca_18164_v3 Cicer arietinum L. HOM05D006325 ORTHO05D007878 2.5e-11 72.0 85 48.2
Hma1.2p1_0594F.1_g185940 Hydrangea macrophylla HOM05D006325 ORTHO05D007878 4.2e-11 71.2 90 48.9
FvH4_3g05130 Fragaria vesca HOM05D006325 ORTHO05D007878 7.2e-11 70.5 89 44.9
Sopen11g011030 Solanum pennellii HOM05D006325 ORTHO05D007878 7.2e-11 70.5 80 48.8
Potri.004G133180 Populus trichocarpa HOM05D006325 ORTHO05D007878 9.5e-11 70.1 80 51.2
Prupe.4G084800 Prunus persica HOM05D006325 ORTHO05D007878 9.5e-11 70.1 100 45.0
Gorai.009G153100 Gossypium raimondii HOM05D006325 ORTHO05D007878 1.6e-10 69.3 93 47.3
Medtr4g083110 Medicago truncatula HOM05D006325 ORTHO05D007878 1.6e-10 69.3 81 48.1
Gohir.D05G149100 Gossypium hirsutum HOM05D006325 ORTHO05D007878 2.1e-10 68.9 85 50.6
TWI53G1846 Tripterygium wilfordii HOM05D006325 ORTHO05D007878 2.1e-10 68.9 97 45.4
FAN21G1261 Fragaria x ananassa HOM05D006325 ORTHO05D007878 2.8e-10 68.6 89 47.2
Gohir.A05G146600 Gossypium hirsutum HOM05D006325 ORTHO05D007878 2.8e-10 68.6 85 50.6
PGSC0003DMG401022984 Solanum tuberosum HOM05D006325 ORTHO05D007878 2.8e-10 68.6 81 48.1
Ciclev10017179m.g Citrus clementina HOM05D006325 ORTHO05D007878 3.6e-10 68.2 89 49.4
DCAR_007876 Daucus carota HOM05D006325 ORTHO05D007878 3.6e-10 68.2 67 52.2
FAN25G3009 Fragaria x ananassa HOM05D006325 ORTHO05D007878 6.1e-10 67.4 89 46.1
Glyma.08G099000 Glycine max HOM05D006325 ORTHO05D007878 6.1e-10 67.4 87 46.0
MD10G1258900 Malus domestica HOM05D006325 ORTHO05D007878 6.1e-10 67.4 103 45.6
Psat7g080440 Pisum sativum HOM05D006325 ORTHO05D007878 6.1e-10 67.4 92 45.7
TWI09G0296 Tripterygium wilfordii HOM05D006325 ORTHO05D007878 6.1e-10 67.4 98 43.9
CAN.G160.12 Capsicum annuum HOM05D006325 ORTHO05D007878 1.4e-09 66.2 106 37.7
Psat7g080360 Pisum sativum HOM05D006325 ORTHO05D007878 1.4e-09 66.2 96 43.8
Sp1g26100 Schrenkiella parvula HOM05D006325 ORTHO05D007878 1.4e-09 66.2 89 46.1
Lsat_1_v5_gn_0_34220 Lactuca sativa HOM05D006325 ORTHO05D007878 1.8e-09 65.9 80 45.0
QL05p055432 Quercus lobata HOM05D006325 ORTHO05D007878 1.8e-09 65.9 94 44.7
Thecc.06G145500 Theobroma cacao HOM05D006325 ORTHO05D007878 1.8e-09 65.9 89 48.3
CiPaw.09G120800 Carya illinoinensis HOM05D006325 ORTHO05D007878 2.3e-09 65.5 88 50.0
FAN11G2857 Fragaria x ananassa HOM05D006325 ORTHO05D007878 2.3e-09 65.5 89 44.9
BcaC06g35496 Brassica carinata HOM05D006325 ORTHO05D007878 4.0e-09 64.7 39 76.9
A07p10030 Brassica napus HOM05D006325 ORTHO05D007878 4.0e-09 64.7 39 76.9
BolC7t42032H Brassica oleracea HOM05D006325 ORTHO05D007878 4.0e-09 64.7 39 76.9
BraA07t28796Z Brassica rapa HOM05D006325 ORTHO05D007878 4.0e-09 64.7 39 76.9
Cpa.g.sc17.42 Carica papaya HOM05D006325 ORTHO05D007878 4.0e-09 64.7 89 42.7
Ciclev10026747m.g Citrus clementina HOM05D006325 ORTHO05D007878 4.0e-09 64.7 77 49.4
Duzib192G0952 Durio zibethinus HOM05D006325 ORTHO05D007878 4.0e-09 64.7 90 44.4
FAN16G1041 Fragaria x ananassa HOM05D006325 ORTHO05D007878 4.0e-09 64.7 89 44.9
FAN16G2667 Fragaria x ananassa HOM05D006325 ORTHO05D007878 4.0e-09 64.7 89 44.9
Nn4g26622 Nelumbo nucifera HOM05D006325 ORTHO05D007878 4.0e-09 64.7 47 63.8
Sopen07g002010 Solanum pennellii HOM05D006325 ORTHO05D007878 4.0e-09 64.7 83 47.0
Ciclev10026858m.g Citrus clementina HOM05D006325 ORTHO05D007878 5.2e-09 64.3 89 44.9
Psat7g080320 Pisum sativum HOM05D006325 ORTHO05D007878 5.2e-09 64.3 88 43.2
BcaB07g32625 Brassica carinata HOM05D006325 ORTHO05D007878 6.8e-09 63.9 39 76.9
Carub.0001s2849 Capsella rubella HOM05D006325 ORTHO05D007878 6.8e-09 63.9 39 76.9
BcaC05g27053 Brassica carinata HOM05D006325 ORTHO05D007878 8.9e-09 63.5 39 76.9
C05p29100 Brassica napus HOM05D006325 ORTHO05D007878 8.9e-09 63.5 39 76.9
BolC5t31641H Brassica oleracea HOM05D006325 ORTHO05D007878 8.9e-09 63.5 39 76.9
CAN.G160.10 Capsicum annuum HOM05D006325 ORTHO05D007878 8.9e-09 63.5 59 55.9
A09p36260 Brassica napus HOM05D006325 ORTHO05D007878 1.5e-08 62.8 67 49.3
AT1G30260 Arabidopsis thaliana HOM05D006325 ORTHO05D007878 2.0e-08 62.4 57 57.9
BcaB03g13839 Brassica carinata HOM05D006325 ORTHO05D007878 2.0e-08 62.4 85 44.7
CANSAT35G0285 Cannabis sativa HOM05D006325 ORTHO05D007878 2.0e-08 62.4 44 68.2
Thhalv10009295m.g Eutrema salsugineum HOM05D006325 ORTHO05D007878 2.0e-08 62.4 67 50.7
AL1G44210 Arabidopsis lyrata HOM05D006325 ORTHO05D007878 2.6e-08 62.0 62 51.6
Haze_05647 Corylus avellana HOM05D006325 ORTHO05D007878 2.6e-08 62.0 87 47.1
CAN.G2122.1 Capsicum annuum HOM05D006325 ORTHO05D007878 3.4e-08 61.6 102 39.2
CARHR029650 Cardamine hirsuta HOM05D006325 ORTHO05D007878 3.4e-08 61.6 51 62.7
Lsat_1_v5_gn_7_27621 Lactuca sativa HOM05D006325 ORTHO05D007878 3.4e-08 61.6 47 66.0
BraA09t39151Z Brassica rapa HOM05D006325 ORTHO05D007878 4.4e-08 61.2 75 50.7
Cc00_g01980 Coffea canephora HOM05D006325 ORTHO05D007878 4.4e-08 61.2 82 43.9
Manes.17G073700 Manihot esculenta HOM05D006325 ORTHO05D007878 4.4e-08 61.2 81 43.2
CAN.G2122.2 Capsicum annuum HOM05D006325 ORTHO05D007878 5.7e-08 60.8 87 41.4
TPR.G34042 Trifolium pratense HOM05D006325 ORTHO05D007878 5.7e-08 60.8 83 43.4
Glyma.05G143000 Glycine max HOM05D006325 ORTHO05D007878 7.5e-08 60.5 86 43.0
Medtr5g077640 Medicago truncatula HOM05D006325 ORTHO05D007878 7.5e-08 60.5 85 41.2
Sopen07g002000 Solanum pennellii HOM05D006325 ORTHO05D007878 7.5e-08 60.5 81 44.4
TPR.G13312 Trifolium pratense HOM05D006325 ORTHO05D007878 7.5e-08 60.5 89 41.6
Lj4g0007216 Lotus japonicus HOM05D006325 ORTHO05D007878 9.8e-08 60.1 91 42.9
QL04p045948 Quercus lobata HOM05D006325 ORTHO05D007878 9.8e-08 60.1 70 50.0
Lalb_Chr07g0187521 Lupinus albus HOM05D006325 ORTHO05D007878 1.7e-07 59.3 97 41.2
PSO541G2396 Papaver somniferum HOM05D006325 ORTHO05D007878 1.7e-07 59.3 99 39.4
Aa31LG6G5500 Aethionema arabicum HOM05D006325 ORTHO05D007878 2.2e-07 58.9 39 69.2
Nitab4.5_0008310g0030 Nicotiana tabacum HOM05D006325 ORTHO05D007878 2.2e-07 58.9 74 44.6
Oeu030957.1 Olea europaea HOM05D006325 ORTHO05D007878 2.2e-07 58.9 47 55.3
Eucgr.D00273 Eucalyptus grandis HOM05D006325 ORTHO05D007878 2.8e-07 58.5 97 42.3
Medtr5g077680 Medicago truncatula HOM05D006325 ORTHO05D007878 2.8e-07 58.5 44 61.4
Medtr8g079458 Medicago truncatula HOM05D006325 ORTHO05D007878 2.8e-07 58.5 44 61.4
TPR.G21965 Trifolium pratense HOM05D006325 ORTHO05D007878 2.8e-07 58.5 89 40.4
COL.COLO4_31021 Corchorus olitorius HOM05D006325 ORTHO05D007878 3.7e-07 58.2 97 40.2
CAN.G160.9 Capsicum annuum HOM05D006325 ORTHO05D007878 6.3e-07 57.4 80 41.2
QL04p045922 Quercus lobata HOM05D006325 ORTHO05D007878 6.3e-07 57.4 70 50.0
Medtr1437s0010 Medicago truncatula HOM05D006325 ORTHO05D007878 8.3e-07 57.0 44 59.1
Medtr4g012020 Medicago truncatula HOM05D006325 ORTHO05D007878 8.3e-07 57.0 44 59.1
MBI02_g07020_MAGBIO Magnolia biondii HOM05D006325 ORTHO05D007878 1.1e-06 56.6 39 69.2
CsaV3_1G036810 Cucumis sativus L. HOM05D006325 ORTHO05D007878 1.4e-06 56.2 76 38.2
MBI18_g11235_MAGBIO Magnolia biondii HOM05D006325 ORTHO05D007878 1.8e-06 55.8 80 43.8
Peaxi162Scf00062g00009 Petunia axillaris HOM05D006325 ORTHO05D007878 2.4e-06 55.5 64 50.0
ClCG03G006550 Citrullus lanatus HOM05D006325 ORTHO05D007878 3.1e-06 55.1 99 41.4
Manes.15G124400 Manihot esculenta HOM05D006325 ORTHO05D007878 3.1e-06 55.1 65 49.2
Aqoxy4G00063 Aquilegia oxysepala HOM05D006325 ORTHO05D007878 4.1e-06 54.7 80 40.0
MELO3C002763.2 Cucumis melo HOM05D006325 ORTHO05D007878 7.0e-06 53.9 78 39.7
Lj4g0010729 Lotus japonicus HOM05D006325 ORTHO05D007878 7.0e-06 53.9 84 39.3


User provided reference genes

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