Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0008389 Sechium edule HOM05D007370 ORTHO05D009394 2.4e-248 861.7 429 100.0
CsaV3_6G022350 Cucumis sativus L. HOM05D007370 ORTHO05D009394 3.7e-204 714.9 438 84.5
Haze_01298 Corylus avellana HOM05D007370 ORTHO05D009394 3.1e-171 605.5 411 74.2
CiPaw.01G138600 Carya illinoinensis HOM05D007370 ORTHO05D009394 1.4e-166 590.1 427 70.3
Dinv15168 Davidia involucrata HOM05D007370 ORTHO05D009394 6.7e-166 587.8 423 70.2
Rhsim02G0003800 Rhododendron simsii HOM05D007370 ORTHO05D009394 1.0e-158 563.9 436 64.9
Potri.010G145700 Populus trichocarpa HOM05D007370 ORTHO05D009394 1.8e-158 563.1 431 66.6
Prupe.1G117500 Prunus persica HOM05D007370 ORTHO05D009394 2.0e-157 559.7 429 66.7
Atru.chr4.3000 Acer truncatum HOM05D007370 ORTHO05D009394 4.4e-157 558.5 435 65.7
TAR362G0601 Trochodendron aralioides HOM05D007370 ORTHO05D009394 5.7e-157 558.1 429 66.9
Manes.15G004200 Manihot esculenta HOM05D007370 ORTHO05D009394 3.7e-156 555.4 429 66.9
COL.COLO4_34615 Corchorus olitorius HOM05D007370 ORTHO05D009394 1.1e-155 553.9 429 66.7
Gohir.A01G034400 Gossypium hirsutum HOM05D007370 ORTHO05D009394 2.4e-155 552.7 434 64.7
Thecc.04G300700 Theobroma cacao HOM05D007370 ORTHO05D009394 4.1e-155 552.0 427 66.0
Eucgr.A00294 Eucalyptus grandis HOM05D007370 ORTHO05D009394 5.3e-155 551.6 423 67.4
Duzib052G0732 Durio zibethinus HOM05D007370 ORTHO05D009394 1.2e-154 550.4 428 66.1
DCAR_002511 Daucus carota HOM05D007370 ORTHO05D009394 1.0e-153 547.4 424 65.3
PGR142G3192 Punica granatum HOM05D007370 ORTHO05D009394 6.5e-153 544.7 421 65.6
Cc03_g00820 Coffea canephora HOM05D007370 ORTHO05D009394 2.5e-152 542.7 417 65.2
RcHm_v2.0_Chr4g0425231 Rosa chinensis HOM05D007370 ORTHO05D009394 3.2e-152 542.3 404 67.6
VMungo0540G1057 Vigna mungo HOM05D007370 ORTHO05D009394 2.7e-151 539.3 413 67.6
Glyma.09G035700 Glycine max HOM05D007370 ORTHO05D009394 4.7e-151 538.5 412 67.0
Nn6g33643 Nelumbo nucifera HOM05D007370 ORTHO05D009394 4.7e-151 538.5 422 65.9
FvH4_4g19730 Fragaria vesca HOM05D007370 ORTHO05D009394 1.8e-150 536.6 423 65.7
Lj6g0027049 Lotus japonicus HOM05D007370 ORTHO05D009394 1.8e-150 536.6 399 69.7
Phvul.006G118000 Phaseolus vulgaris HOM05D007370 ORTHO05D009394 3.0e-150 535.8 413 67.1
Migut.G00060 Erythranthe guttata HOM05D007370 ORTHO05D009394 5.2e-150 535.0 421 62.2
MELO3C021271.2 Cucumis melo HOM05D007370 ORTHO05D009394 6.8e-150 534.6 320 85.9
Gorai.002G030100 Gossypium raimondii HOM05D007370 ORTHO05D009394 1.2e-149 533.9 456 61.2
MBI18_g37561_MAGBIO Magnolia biondii HOM05D007370 ORTHO05D009394 5.7e-149 531.6 440 63.0
FAN07G1244 Fragaria x ananassa HOM05D007370 ORTHO05D009394 2.2e-148 529.6 425 65.2
Sopen12g033950 Solanum pennellii HOM05D007370 ORTHO05D009394 3.7e-148 528.9 422 62.6
QL06p012270 Quercus lobata HOM05D007370 ORTHO05D009394 1.8e-147 526.6 391 68.3
Medtr2g034140 Medicago truncatula HOM05D007370 ORTHO05D009394 5.4e-147 525.0 402 67.7
arahy.Tifrunner.gnm1.ann1.VHF2FI Arachis hypogaea HOM05D007370 ORTHO05D009394 7.0e-147 524.6 396 67.4
Lj6A691G74 Lonicera japonica HOM05D007370 ORTHO05D009394 1.2e-146 523.9 435 63.4
Sc13g0006460 Simmondsia chinensis HOM05D007370 ORTHO05D009394 3.5e-146 522.3 428 63.6
arahy.Tifrunner.gnm1.ann1.HMTG6S Arachis hypogaea HOM05D007370 ORTHO05D009394 7.7e-146 521.2 383 69.2
Psat1g161680 Pisum sativum HOM05D007370 ORTHO05D009394 1.7e-145 520.0 411 66.4
Solyc12g099270.2 Solanum lycopersicum HOM05D007370 ORTHO05D009394 2.3e-145 519.6 423 62.2
HanXRQChr01g0030981 Helianthus annuus HOM05D007370 ORTHO05D009394 2.9e-145 519.2 412 64.3
MD16G1154200 Malus domestica HOM05D007370 ORTHO05D009394 3.8e-145 518.8 431 63.6
TPR.G27253 Trifolium pratense HOM05D007370 ORTHO05D009394 3.8e-145 518.8 423 65.0
EL10Ac3g05507 Beta vulgaris HOM05D007370 ORTHO05D009394 7.2e-144 514.6 420 63.3
PGSC0003DMG400004697 Solanum tuberosum HOM05D007370 ORTHO05D009394 8.9e-142 507.7 419 60.9
ECA248G2723 Erigeron canadensis HOM05D007370 ORTHO05D009394 3.4e-141 505.8 421 62.5
SalBow8G4515 Salvia bowleyana HOM05D007370 ORTHO05D009394 7.5e-141 504.6 390 63.1
ClCG06G004600 Citrullus lanatus HOM05D007370 ORTHO05D009394 3.7e-140 502.3 455 62.9
CAN.G484.61 Capsicum annuum HOM05D007370 ORTHO05D009394 8.3e-140 501.1 424 59.4
Lalb_Chr20g0120861 Lupinus albus HOM05D007370 ORTHO05D009394 5.4e-139 498.4 432 63.0
Peaxi162Scf00120g00023 Petunia axillaris HOM05D007370 ORTHO05D009394 6.6e-137 491.5 391 61.6
Nitab4.5_0002294g0020 Nicotiana tabacum HOM05D007370 ORTHO05D009394 5.6e-136 488.4 411 59.1
Nitab4.5_0002150g0160 Nicotiana tabacum HOM05D007370 ORTHO05D009394 2.1e-135 486.5 411 59.6
unitig_37.g12412 Utricularia gibba HOM05D007370 ORTHO05D009394 6.1e-135 485.0 402 60.9
ATR0693G166 Amborella trichopoda HOM05D007370 ORTHO05D009394 3.1e-134 482.6 396 61.4
AUR62039281 Chenopodium quinoa HOM05D007370 ORTHO05D009394 3.1e-134 482.6 422 60.7
Sabra10G0112300 Salix brachista HOM05D007370 ORTHO05D009394 4.0e-134 482.3 352 68.8
AUR62016207 Chenopodium quinoa HOM05D007370 ORTHO05D009394 1.7e-129 466.8 399 61.4
CDE08G1199 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 2.5e-128 463.0 420 57.1
arahy.Tifrunner.gnm1.ann1.DXY8A4 Arachis hypogaea HOM05D007370 ORTHO05D009394 9.5e-128 461.1 426 59.2
Zm00001eb356360 Zea mays HOM05D007370 ORTHO05D009394 6.2e-127 458.4 384 62.8
FAN12G3716 Fragaria x ananassa HOM05D007370 ORTHO05D009394 3.1e-126 456.1 414 58.9
TWI09G1560 Tripterygium wilfordii HOM05D007370 ORTHO05D009394 6.4e-124 448.4 407 58.5
Os05g0157300 Oryza sativa ssp. japonica HOM05D007370 ORTHO05D009394 4.1e-123 445.7 409 58.2
SEGI_11896 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 6.0e-122 441.8 412 55.8
Lsat_1_v5_gn_1_41060 Lactuca sativa HOM05D007370 ORTHO05D009394 1.6e-119 433.7 335 65.7
Hund11933 Selenicereus undatus HOM05D007370 ORTHO05D009394 2.2e-116 423.3 428 54.9
CSS0048431 Camellia sinensis var. sinensis HOM05D007370 ORTHO05D009394 9.2e-115 417.9 311 68.5
Ah.04g156700 Amaranthus hybridus HOM05D007370 ORTHO05D009394 3.5e-114 416.0 421 54.2
Gohir.D01G023538 Gossypium hirsutum HOM05D007370 ORTHO05D009394 3.6e-111 406.0 313 64.5
arahy.Tifrunner.gnm1.ann1.CV4FMG Arachis hypogaea HOM05D007370 ORTHO05D009394 1.1e-104 384.4 346 59.0
vmacro15182 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 1.5e-104 384.0 301 63.8
Cpa.g.sc9.57 Carica papaya HOM05D007370 ORTHO05D009394 3.3e-104 382.9 298 65.1
Peaxi162Scf01160g00001 Petunia axillaris HOM05D007370 ORTHO05D009394 1.1e-99 367.9 381 52.0
Pp3c14_3570 Physcomitrium patens HOM05D007370 ORTHO05D009394 1.7e-97 360.5 426 47.7
Mapoly0007s0102 Marchantia polymorpha HOM05D007370 ORTHO05D009394 5.8e-93 345.5 305 55.1
CBR_g50285 Chara braunii HOM05D007370 ORTHO05D009394 7.9e-90 335.1 389 45.2
AagrBONN_evm.TU.Sc2ySwM_228.2788 Anthoceros agrestis HOM05D007370 ORTHO05D009394 5.3e-86 322.4 360 47.8
Eucgr.A00046 Eucalyptus grandis HOM05D007370 ORTHO05D009394 6.5e-84 315.5 198 76.3
SGA_v2.0_scaffold104G30077 Striga asiatica HOM05D007370 ORTHO05D009394 1.3e-81 307.8 267 58.1
GSVIVG01034991001 Vitis vinifera HOM05D007370 ORTHO05D009394 1.0e-76 291.6 205 67.8
Mapoly0007s0137 Marchantia polymorpha HOM05D007370 ORTHO05D009394 3.5e-74 283.1 414 41.1
HPP92_027782 Vanilla planifolia HOM05D007370 ORTHO05D009394 9.7e-72 275.0 211 63.5
SMO145G0205 Selaginella moellendorffii HOM05D007370 ORTHO05D009394 3.8e-68 263.1 379 39.3
Ca_03237_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 1.5e-61 241.1 180 67.8
Hund11975 Selenicereus undatus HOM05D007370 ORTHO05D009394 2.0e-61 240.7 239 54.4
QL06p020122 Quercus lobata HOM05D007370 ORTHO05D009394 1.6e-58 231.1 276 49.6
Glyma.15G140501 Glycine max HOM05D007370 ORTHO05D009394 1.6e-45 188.0 186 53.8
vmacro15183 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 2.1e-42 177.6 134 68.7
arahy.Tifrunner.gnm1.ann1.Y96K7L Arachis hypogaea HOM05D007370 ORTHO05D009394 1.7e-39 167.9 187 48.1
Ca_00981_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 5.0e-36 156.4 137 67.2
CDE02G4406 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 5.4e-30 136.3 100 67.0
MD13G1153900 Malus domestica HOM05D007370 ORTHO05D009394 2.7e-29 134.0 109 65.1
Oeu001173.1 Olea europaea HOM05D007370 ORTHO05D009394 1.7e-28 131.3 133 52.6
HPP92_027781 Vanilla planifolia HOM05D007370 ORTHO05D009394 9.5e-27 125.6 129 51.2
Actinidia14258 Actinidia chinensis HOM05D001648 ORTHO05D001657 3.9e-20 103.6 111 48.6
Mapoly0007s0289 Marchantia polymorpha HOM05D007370 ORTHO05D009394 1.2e-18 98.6 135 43.0
Mapoly0252s0002 Marchantia polymorpha HOM05D007370 ORTHO05D009394 1.2e-18 98.6 135 43.0
Glyma.18G184250 Glycine max HOM05D007370 ORTHO05D009394 2.9e-15 87.4 65 61.5
Potri.008G105401 Populus trichocarpa HOM05D007370 ORTHO05D009394 2.7e-13 80.9 67 61.2
arahy.Tifrunner.gnm1.ann1.ZDLG37 Arachis hypogaea HOM05D004051 ORTHO05D004480 6.0e-13 79.7 60 71.7
CDE02G2864 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 6.0e-13 79.7 96 51.0
MD13G1154300 Malus domestica HOM05D007370 ORTHO05D009394 4.3e-11 73.6 42 90.5
FAN12G2956 Fragaria x ananassa HOM05D007370 ORTHO05D009394 9.5e-11 72.4 61 63.9
SEGI_23244 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 9.8e-08 62.4 61 52.5


User provided reference genes

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