Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0008372 Sechium edule HOM05D000955 ORTHO05D001429 6.2e-85 317.4 156 100.0
Sed0009213 Sechium edule HOM05D000955 ORTHO05D001429 2.4e-76 288.9 166 88.0
Sed0023504 Sechium edule HOM05D000955 ORTHO05D001429 4.0e-76 288.1 166 88.6
Sed0014774 Sechium edule HOM05D000955 ORTHO05D001429 2.6e-75 285.4 166 86.7
Sed0014822 Sechium edule HOM05D000955 ORTHO05D001429 2.4e-73 278.9 167 86.2
Sed0013848 Sechium edule HOM05D000955 ORTHO05D001429 1.6e-72 276.2 166 84.9
CsaV3_2G027970 Cucumis sativus L. HOM05D000955 ORTHO05D001429 2.5e-41 172.6 172 57.6
ClCG08G015790 Citrullus lanatus HOM05D000955 ORTHO05D001429 7.4e-38 161.0 175 50.9
MELO3C010876.2 Cucumis melo HOM05D000955 ORTHO05D001429 2.2e-37 159.5 169 56.8
ClCG08G015800 Citrullus lanatus HOM05D000955 ORTHO05D001429 1.4e-36 156.8 156 55.8
Sed0019916 Sechium edule HOM05D000955 ORTHO05D001429 2.0e-27 126.3 146 47.9
ClCG11G000380 Citrullus lanatus HOM05D000955 ORTHO05D001429 2.6e-27 125.9 165 47.9
MELO3C026462.2 Cucumis melo HOM05D000955 ORTHO05D001429 5.5e-25 118.2 166 46.4
CsaV3_5G015470 Cucumis sativus L. HOM05D000955 ORTHO05D001429 9.4e-25 117.5 153 46.4
Sed0005408 Sechium edule HOM05D000955 ORTHO05D001429 2.1e-24 116.3 154 43.5
Sed0011985 Sechium edule HOM05D000955 ORTHO05D001429 4.7e-24 115.2 172 44.2
Sed0019635 Sechium edule HOM05D000955 ORTHO05D001429 4.7e-24 115.2 172 44.2
Sed0024179 Sechium edule HOM05D000955 ORTHO05D001429 6.1e-24 114.8 170 42.4
Sed0004971 Sechium edule HOM05D000955 ORTHO05D001429 1.7e-21 106.7 82 64.6
ClCG08G015840 Citrullus lanatus HOM05D000955 ORTHO05D001429 6.3e-21 104.8 141 45.4
Sed0027202 Sechium edule HOM05D000955 ORTHO05D001429 6.3e-21 104.8 146 44.5
ClCG08G015850 Citrullus lanatus HOM05D000955 ORTHO05D001429 2.4e-20 102.8 81 61.7
Sed0014291 Sechium edule HOM05D000955 ORTHO05D001429 7.0e-20 101.3 72 66.7
CsaV3_2G027890 Cucumis sativus L. HOM05D000955 ORTHO05D001429 5.9e-19 98.2 148 42.6
Sed0024187 Sechium edule HOM05D000955 ORTHO05D001429 7.7e-19 97.8 75 58.7
MELO3C010874.2 Cucumis melo HOM05D000955 ORTHO05D001429 1.3e-18 97.1 144 41.0
MELO3C010869.2 Cucumis melo HOM05D000955 ORTHO05D001429 1.7e-18 96.7 81 56.8
MELO3C010875.2 Cucumis melo HOM05D000955 ORTHO05D001429 8.5e-18 94.4 80 56.2
Sed0017113 Sechium edule HOM05D000955 ORTHO05D001429 1.1e-17 94.0 78 57.7
Sed0008712 Sechium edule HOM05D000955 ORTHO05D001429 1.4e-17 93.6 80 58.8
CsaV3_2G027880 Cucumis sativus L. HOM05D000955 ORTHO05D001429 3.2e-17 92.4 81 54.3
CsaV3_2G027960 Cucumis sativus L. HOM05D000955 ORTHO05D001429 3.2e-17 92.4 78 56.4
Sed0008843 Sechium edule HOM05D000955 ORTHO05D001429 7.2e-17 91.3 88 51.1
CsaV3_2G027950 Cucumis sativus L. HOM05D000955 ORTHO05D001429 9.4e-17 90.9 147 38.8
Sed0015785 Sechium edule HOM05D000955 ORTHO05D001429 9.4e-17 90.9 75 52.0
CsaV3_5G015490 Cucumis sativus L. HOM05D000955 ORTHO05D001429 1.2e-16 90.5 135 42.2
ClCG08G015820 Citrullus lanatus HOM05D000955 ORTHO05D001429 1.5e-14 83.6 66 57.6
ClCG08G015810 Citrullus lanatus HOM05D000955 ORTHO05D001429 4.4e-14 82.0 146 39.0
MELO3C010870.2 Cucumis melo HOM05D000955 ORTHO05D001429 2.2e-13 79.7 145 37.9
Sed0026745 Sechium edule HOM05D000955 ORTHO05D001429 2.2e-13 79.7 72 48.6
CsaV3_5G015500 Cucumis sativus L. HOM05D000955 ORTHO05D001429 3.1e-12 75.9 49 65.3
Sed0019946 Sechium edule HOM05D000955 ORTHO05D001429 4.1e-12 75.5 72 54.2
Sed0010424 Sechium edule HOM05D000955 ORTHO05D001429 7.0e-12 74.7 72 47.2
Solyc04g079080.2 Solanum lycopersicum HOM05D000955 ORTHO05D003340 7.0e-12 74.7 160 33.1
MELO3C010868.2 Cucumis melo HOM05D000955 ORTHO05D001429 9.1e-12 74.3 75 48.0
Sed0019911 Sechium edule HOM05D000955 ORTHO05D001429 1.2e-11 73.9 72 48.6
MELO3C016745.2 Cucumis melo HOM05D000955 ORTHO05D001429 1.6e-11 73.6 70 47.1
CsaV3_2G027870 Cucumis sativus L. HOM05D000955 ORTHO05D001429 1.6e-11 73.6 75 48.0
Sed0021895 Sechium edule HOM05D000955 ORTHO05D001429 1.6e-11 73.6 72 47.2
CsaV3_4G034250 Cucumis sativus L. HOM05D000955 ORTHO05D001429 2.0e-11 73.2 70 45.7
Dinv35967 Davidia involucrata HOM05D000955 ORTHO05D001429 4.5e-11 72.0 168 32.1
ClCG05G019800 Citrullus lanatus HOM05D000955 ORTHO05D001429 7.7e-11 71.2 70 44.3
ClCG08G015860 Citrullus lanatus HOM05D000955 ORTHO05D001429 1.7e-10 70.1 75 45.3
Sed0019585 Sechium edule HOM05D000955 ORTHO05D001429 1.7e-10 70.1 72 43.1
Manes.05G173400 Manihot esculenta HOM05D000955 ORTHO05D001429 2.9e-10 69.3 72 44.4
Sed0024453 Sechium edule HOM05D000955 ORTHO05D001429 5.0e-10 68.6 72 41.7
COL.COLO4_08734 Corchorus olitorius HOM05D000955 ORTHO05D001429 6.5e-10 68.2 74 47.3
Cfa018544 Carpinus fangiana HOM05D000955 ORTHO05D001429 8.5e-10 67.8 74 43.2
Gohir.D02G091700 Gossypium hirsutum HOM05D000955 ORTHO05D001429 8.5e-10 67.8 78 46.2
Gorai.005G102800 Gossypium raimondii HOM05D000955 ORTHO05D001429 8.5e-10 67.8 78 46.2
Sed0022222 Sechium edule HOM05D000955 ORTHO05D001429 8.5e-10 67.8 72 41.7
COL.COLO4_26501 Corchorus olitorius HOM05D000955 ORTHO05D001429 1.1e-09 67.4 70 44.3
Thecc.08G009900 Theobroma cacao HOM05D000955 ORTHO05D001429 1.5e-09 67.0 78 44.9
Nitab4.5_0001101g0050 Nicotiana tabacum HOM05D000955 ORTHO05D001429 1.9e-09 66.6 73 42.5
QL02p005175 Quercus lobata HOM05D000955 ORTHO05D001429 1.9e-09 66.6 71 42.3
QL02p005235 Quercus lobata HOM05D000955 ORTHO05D001429 1.9e-09 66.6 81 43.2
CiPaw.15G060000 Carya illinoinensis HOM05D000955 ORTHO05D001429 2.5e-09 66.2 71 45.1
Cfa018534 Carpinus fangiana HOM05D000955 ORTHO05D001429 3.2e-09 65.9 71 42.3
QL02p005180 Quercus lobata HOM05D000955 ORTHO05D001429 3.2e-09 65.9 70 40.0
AUR62014425 Chenopodium quinoa HOM05D000955 ORTHO05D001429 4.2e-09 65.5 70 42.9
AUR62019161 Chenopodium quinoa HOM05D000955 ORTHO05D001429 4.2e-09 65.5 70 42.9
AUR62034572 Chenopodium quinoa HOM05D000955 ORTHO05D001429 4.2e-09 65.5 70 42.9
ClCG08G015880 Citrullus lanatus HOM05D000955 ORTHO05D001429 5.5e-09 65.1 76 40.8
Potri.008G079132 Populus trichocarpa HOM05D000955 ORTHO05D001429 5.5e-09 65.1 70 45.7
Atru.chr13.685 Acer truncatum HOM05D000955 ORTHO05D001429 7.2e-09 64.7 73 42.5
Dinv29919 Davidia involucrata HOM05D000955 ORTHO05D001429 7.2e-09 64.7 105 37.1
Nitab4.5_0000686g0110 Nicotiana tabacum HOM05D000955 ORTHO05D003340 7.2e-09 64.7 75 40.0
CiPaw.15G058900 Carya illinoinensis HOM05D000955 ORTHO05D001429 9.4e-09 64.3 79 45.6
Potri.008G079066 Populus trichocarpa HOM05D000955 ORTHO05D001429 9.4e-09 64.3 77 42.9
Ah.12g052380 Amaranthus hybridus HOM05D006501 ORTHO05D008241 1.2e-08 63.9 73 41.1
MELO3C010866.2 Cucumis melo HOM05D000955 ORTHO05D001429 1.2e-08 63.9 78 41.0
QL02p005131 Quercus lobata HOM05D000955 ORTHO05D001429 1.2e-08 63.9 82 35.4
QL02p005214 Quercus lobata HOM05D000023 ORTHO05D000014 1.2e-08 63.9 70 40.0
Sc26g0000770 Simmondsia chinensis HOM05D000955 ORTHO05D001429 1.2e-08 63.9 75 40.0
CiPaw.15G060100 Carya illinoinensis HOM05D000955 ORTHO05D001429 1.6e-08 63.5 82 41.5
CsaV3_2G027860 Cucumis sativus L. HOM05D000955 ORTHO05D001429 1.6e-08 63.5 77 40.3
Sc26g0000780 Simmondsia chinensis HOM05D000955 ORTHO05D001429 1.6e-08 63.5 74 39.2
Cfa018535 Carpinus fangiana HOM05D000955 ORTHO05D001429 2.1e-08 63.2 71 46.5
Haze_17535 Corylus avellana HOM05D000955 ORTHO05D001429 2.1e-08 63.2 71 40.8
Gorai.010G019300 Gossypium raimondii HOM05D000955 ORTHO05D001429 2.1e-08 63.2 96 39.6
Prupe.1G436900 Prunus persica HOM05D000955 ORTHO05D001429 2.7e-08 62.8 74 44.6
Actinidia22622 Actinidia chinensis HOM05D000955 ORTHO05D001429 3.6e-08 62.4 76 44.7
QL02p005194 Quercus lobata HOM05D000955 ORTHO05D001429 3.6e-08 62.4 74 43.2
Sopen04g032680 Solanum pennellii HOM05D000955 ORTHO05D001429 3.6e-08 62.4 80 42.5
Thecc.08G008600 Theobroma cacao HOM05D000955 ORTHO05D001429 3.6e-08 62.4 103 35.0
CiPaw.15G059000 Carya illinoinensis HOM05D000955 ORTHO05D001429 4.7e-08 62.0 79 44.3
COL.COLO4_26488 Corchorus olitorius HOM05D000955 ORTHO05D001429 4.7e-08 62.0 74 43.2
Sed0006046 Sechium edule HOM05D000955 ORTHO05D001429 4.7e-08 62.0 73 43.8
Atru.chr13.675 Acer truncatum HOM05D000955 ORTHO05D001429 6.1e-08 61.6 77 42.9
Atru.chr13.682 Acer truncatum HOM05D000955 ORTHO05D001429 6.1e-08 61.6 80 37.5
ClCG05G019810 Citrullus lanatus HOM05D000955 ORTHO05D001429 6.1e-08 61.6 73 43.8
Atru.chr13.684 Acer truncatum HOM05D000955 ORTHO05D001429 8.0e-08 61.2 63 46.0
CsaV3_4G034260 Cucumis sativus L. HOM05D000955 ORTHO05D001429 8.0e-08 61.2 73 43.8
Hma1.2p1_0982F.1_g243960 Hydrangea macrophylla HOM05D000955 ORTHO05D001429 8.0e-08 61.2 82 41.5
CiPaw.16G045300 Carya illinoinensis HOM05D000955 ORTHO05D001429 1.0e-07 60.8 83 39.8
MELO3C010863.2 Cucumis melo HOM05D000955 ORTHO05D001429 1.0e-07 60.8 71 43.7
Gohir.D06G016300 Gossypium hirsutum HOM05D000955 ORTHO05D001429 1.0e-07 60.8 101 35.6
Gorai.010G019200 Gossypium raimondii HOM05D000955 ORTHO05D001429 1.0e-07 60.8 101 35.6
Atru.chr13.660 Acer truncatum HOM05D000955 ORTHO05D001429 1.4e-07 60.5 78 41.0
Ah.05g171940 Amaranthus hybridus HOM05D000955 ORTHO05D001429 1.4e-07 60.5 76 39.5
QL02p005085 Quercus lobata HOM05D000955 ORTHO05D001429 1.4e-07 60.5 72 40.3
Sed0000195 Sechium edule HOM05D000955 ORTHO05D001429 1.4e-07 60.5 71 42.3
COL.COLO4_26489 Corchorus olitorius HOM05D000955 ORTHO05D001429 1.8e-07 60.1 70 40.0
Manes.05G172801 Manihot esculenta HOM05D000955 ORTHO05D001429 1.8e-07 60.1 76 35.5
Potri.002G126900 Populus trichocarpa HOM05D000955 ORTHO05D001429 1.8e-07 60.1 74 40.5
PGR031G2327 Punica granatum HOM05D000955 ORTHO05D001429 1.8e-07 60.1 69 42.0
EL10Ac1g00552 Beta vulgaris HOM05D000955 ORTHO05D001429 2.3e-07 59.7 69 42.0
AUR62010820 Chenopodium quinoa HOM05D006501 ORTHO05D008241 2.3e-07 59.7 79 36.7
Gohir.A03G076900 Gossypium hirsutum HOM05D000955 ORTHO05D001429 2.3e-07 59.7 70 41.4
Gohir.A06G018101 Gossypium hirsutum HOM05D000955 ORTHO05D001429 2.3e-07 59.7 96 37.5
MBI02_g02966_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 2.3e-07 59.7 80 36.2
Prupe.1G437100 Prunus persica HOM05D000955 ORTHO05D001429 2.3e-07 59.7 74 43.2
PGSC0003DMG400007984 Solanum tuberosum HOM05D000955 ORTHO05D001429 2.3e-07 59.7 80 42.5
CiPaw.16G044800 Carya illinoinensis HOM05D000955 ORTHO05D001429 3.0e-07 59.3 64 42.2
AUR62014426 Chenopodium quinoa HOM05D000955 ORTHO05D001429 3.0e-07 59.3 70 40.0
AUR62019819 Chenopodium quinoa HOM05D006501 ORTHO05D008241 3.0e-07 59.3 90 36.7
AUR62034571 Chenopodium quinoa HOM05D000955 ORTHO05D001429 3.0e-07 59.3 70 40.0
MELO3C016746.2 Cucumis melo HOM05D000955 ORTHO05D001429 3.0e-07 59.3 73 43.8
Gorai.005G102700 Gossypium raimondii HOM05D000955 ORTHO05D001429 3.0e-07 59.3 70 41.4
EL10Ac5g12897 Beta vulgaris HOM05D006501 ORTHO05D008241 4.0e-07 58.9 69 40.6
Cfa018537 Carpinus fangiana HOM05D000955 ORTHO05D001429 4.0e-07 58.9 70 40.0
Gohir.A06G018300 Gossypium hirsutum HOM05D000955 ORTHO05D001429 4.0e-07 58.9 66 48.5
Peaxi162Scf00252g00112 Petunia axillaris HOM05D000955 ORTHO05D001429 4.0e-07 58.9 78 42.3
Sed0002759 Sechium edule HOM05D000955 ORTHO05D001429 4.0e-07 58.9 70 42.9
Atru.chr13.681 Acer truncatum HOM05D000955 ORTHO05D001429 5.2e-07 58.5 85 35.3
Atru.chr13.683 Acer truncatum HOM05D000955 ORTHO05D001429 5.2e-07 58.5 71 38.0
Gohir.D06G016400 Gossypium hirsutum HOM05D000955 ORTHO05D001429 5.2e-07 58.5 73 39.7
Manes.05G173000 Manihot esculenta HOM05D000955 ORTHO05D001429 5.2e-07 58.5 74 36.5
Prupe.1G436800 Prunus persica HOM05D000955 ORTHO05D001429 5.2e-07 58.5 69 46.4
Prupe.1G437000 Prunus persica HOM05D000955 ORTHO05D001429 5.2e-07 58.5 69 46.4
Thecc.04G031300 Theobroma cacao HOM05D000955 ORTHO05D001429 5.2e-07 58.5 77 40.3
Thecc.08G009100 Theobroma cacao HOM05D000955 ORTHO05D001429 5.2e-07 58.5 69 43.5
COL.COLO4_26496 Corchorus olitorius HOM05D000955 ORTHO05D001429 6.7e-07 58.2 76 39.5
CsaV3_2G027920 Cucumis sativus L. HOM05D000955 ORTHO05D001429 6.7e-07 58.2 77 37.7
CSS0046588 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 8.8e-07 57.8 79 36.7
Cfa018536 Carpinus fangiana HOM05D000955 ORTHO05D001429 8.8e-07 57.8 70 41.4
Gohir.D06G016500 Gossypium hirsutum HOM05D000955 ORTHO05D001429 8.8e-07 57.8 66 48.5
Gorai.010G019400 Gossypium raimondii HOM05D000955 ORTHO05D001429 8.8e-07 57.8 66 48.5
Thecc.08G008700 Theobroma cacao HOM05D000955 ORTHO05D001429 8.8e-07 57.8 73 41.1
Thecc.08G009700 Theobroma cacao HOM05D000955 ORTHO05D001429 1.2e-06 57.4 71 39.4
Atru.chr13.679 Acer truncatum HOM05D000955 ORTHO05D001429 1.5e-06 57.0 86 37.2
CSS0003971 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 1.5e-06 57.0 79 36.7
CAN.G1938.3 Capsicum annuum HOM05D000955 ORTHO05D001429 1.5e-06 57.0 96 34.4
Cfa018543 Carpinus fangiana HOM05D000955 ORTHO05D001429 1.5e-06 57.0 68 44.1
Ciclev10002898m.g Citrus clementina HOM05D000955 ORTHO05D001429 1.5e-06 57.0 76 39.5
Sed0018620 Sechium edule HOM05D000955 ORTHO05D001429 1.5e-06 57.0 73 41.1
Thecc.08G009300 Theobroma cacao HOM05D000955 ORTHO05D001429 1.5e-06 57.0 71 42.3
CSS0008676 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 2.0e-06 56.6 79 36.7
Cfa018540 Carpinus fangiana HOM05D000955 ORTHO05D001429 2.0e-06 56.6 73 38.4
CsaV3_2G027840 Cucumis sativus L. HOM05D000955 ORTHO05D001429 2.0e-06 56.6 68 42.6
Gohir.D02G091600 Gossypium hirsutum HOM05D000955 ORTHO05D001429 2.0e-06 56.6 70 40.0
Sc15g0003420 Simmondsia chinensis HOM05D000955 ORTHO05D001429 2.0e-06 56.6 74 40.5
Sc15g0003430 Simmondsia chinensis HOM05D000955 ORTHO05D001429 2.0e-06 56.6 73 39.7
Cfa018533 Carpinus fangiana HOM05D000955 ORTHO05D001429 2.6e-06 56.2 76 38.2
Nitab4.5_0000686g0170 Nicotiana tabacum HOM05D000955 ORTHO05D001429 2.6e-06 56.2 71 40.8
Solyc12g088840.1 Solanum lycopersicum HOM05D000955 ORTHO05D001429 2.6e-06 56.2 71 39.4
CSS0027110 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 3.3e-06 55.8 79 35.4
CSS0009132 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 4.4e-06 55.5 79 35.4
Nitab4.5_0000686g0100 Nicotiana tabacum HOM05D000955 ORTHO05D001429 4.4e-06 55.5 74 39.2
Nitab4.5_0000686g0120 Nicotiana tabacum HOM05D000955 ORTHO05D001429 4.4e-06 55.5 71 40.8
Rhsim07G0228900 Rhododendron simsii HOM05D000955 ORTHO05D003340 4.4e-06 55.5 150 29.3
Rhsim07G0229000 Rhododendron simsii HOM05D000955 ORTHO05D003340 4.4e-06 55.5 154 25.3
Sopen12g030730 Solanum pennellii HOM05D000955 ORTHO05D001429 4.4e-06 55.5 71 39.4
Atru.chr13.676 Acer truncatum HOM05D000955 ORTHO05D001429 5.7e-06 55.1 71 43.7
Actinidia22623 Actinidia chinensis HOM05D000955 ORTHO05D001429 5.7e-06 55.1 66 40.9
Nitab4.5_0001101g0030 Nicotiana tabacum HOM05D000955 ORTHO05D001429 5.7e-06 55.1 71 39.4
Peaxi162Scf00064g00025 Petunia axillaris HOM05D000955 ORTHO05D003340 5.7e-06 55.1 140 29.3
CSS0012590 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 7.5e-06 54.7 79 35.4
CAN.G705.3 Capsicum annuum HOM05D000955 ORTHO05D001429 7.5e-06 54.7 96 33.3
CiPaw.16G045200 Carya illinoinensis HOM05D000955 ORTHO05D001429 7.5e-06 54.7 71 39.4
Manes.05G172901 Manihot esculenta HOM05D000955 ORTHO05D001429 7.5e-06 54.7 76 39.5
Manes.18G036100 Manihot esculenta HOM05D000955 ORTHO05D001429 7.5e-06 54.7 70 37.1
COL.COLO4_26493 Corchorus olitorius HOM05D000955 ORTHO05D001429 9.7e-06 54.3 71 42.3
Prupe.1G437300 Prunus persica HOM05D000955 ORTHO05D003340 9.7e-06 54.3 76 38.2
RcHm_v2.0_Chr6g0278331 Rosa chinensis HOM05D000955 ORTHO05D001429 9.7e-06 54.3 75 40.0
Solyc01g150126.1 Solanum lycopersicum HOM05D000955 ORTHO05D001429 9.7e-06 54.3 75 36.0
TWI36G1691 Tripterygium wilfordii HOM05D000955 ORTHO05D001429 9.7e-06 54.3 77 39.0


User provided reference genes

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