Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0008189 Sechium edule HOM05D007160 ORTHO05D005331 1.2e-90 337.0 257 100.0
MELO3C007263.2 Cucumis melo HOM05D007160 ORTHO05D005331 9.3e-54 214.5 303 57.1
ClCG01G023230 Citrullus lanatus HOM05D007160 ORTHO05D005331 1.3e-52 210.7 284 49.3
Sed0007130 Sechium edule HOM05D007160 ORTHO05D005331 2.2e-47 193.4 264 49.2
CsaV3_6G050380 Cucumis sativus L. HOM05D007160 ORTHO05D005331 1.4e-46 190.7 305 59.0
Cfa000523 Carpinus fangiana HOM05D007160 ORTHO05D005331 1.2e-21 107.8 224 40.6
Duzib192G1060 Durio zibethinus HOM05D007160 ORTHO05D005331 3.3e-19 99.8 274 33.9
Duzib160G0215 Durio zibethinus HOM05D007160 ORTHO05D005331 6.9e-17 92.0 261 40.6
PGR042G2677 Punica granatum HOM05D007160 ORTHO05D005331 6.5e-15 85.5 289 36.0
QL05p042103 Quercus lobata HOM05D007160 ORTHO05D005331 6.5e-15 85.5 89 61.8
QL05p042154 Quercus lobata HOM05D007160 ORTHO05D005331 6.5e-15 85.5 89 61.8
Nitab4.5_0001375g0150 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.2e-13 81.3 86 54.7
Gorai.011G030000 Gossypium raimondii HOM05D007160 ORTHO05D005331 3.6e-13 79.7 88 54.5
Dinv40598 Davidia involucrata HOM05D007882 ORTHO05D009870 4.7e-13 79.3 67 59.7
Nitab4.5_0000516g0060 Nicotiana tabacum HOM05D007160 ORTHO05D005331 4.7e-13 79.3 94 51.1
Ca_00358_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 6.1e-13 79.0 285 39.3
Ca_30973_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 6.1e-13 79.0 285 39.3
MSTRG.13207 Avicennia marina HOM05D007160 ORTHO05D005331 7.9e-13 78.6 270 29.3
DCAR_004048 Daucus carota HOM05D007160 ORTHO05D005331 7.9e-13 78.6 92 54.3
Potri.004G048301 Populus trichocarpa HOM05D007160 ORTHO05D005331 1.0e-12 78.2 230 40.9
Thecc.06G181500 Theobroma cacao HOM05D007160 ORTHO05D005331 1.4e-12 77.8 104 51.0
Psat1g203080 Pisum sativum HOM05D007160 ORTHO05D005331 1.8e-12 77.4 213 36.2
EL10Ac8g20435 Beta vulgaris HOM05D007160 ORTHO05D005331 2.3e-12 77.0 99 51.5
Duzib235G1074 Durio zibethinus HOM05D007160 ORTHO05D005331 3.0e-12 76.6 318 35.2
Lj4g0028244 Lotus japonicus HOM05D007160 ORTHO05D005331 3.0e-12 76.6 252 42.5
Peaxi162Scf00031g00084 Petunia axillaris HOM05D007160 ORTHO05D005331 3.0e-12 76.6 89 48.3
Phvul.002G232100 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 3.0e-12 76.6 90 56.7
Haze_06386 Corylus avellana HOM05D007160 ORTHO05D005331 3.9e-12 76.3 299 40.5
Cc02_g13790 Coffea canephora HOM05D007160 ORTHO05D005331 5.2e-12 75.9 80 55.0
Gohir.A10G027800 Gossypium hirsutum HOM05D007160 ORTHO05D005331 6.7e-12 75.5 88 53.4
CiPaw.09G063200 Carya illinoinensis HOM05D007160 ORTHO05D005331 2.0e-11 73.9 240 35.4
Nitab4.5_0001375g0140 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.0e-11 73.9 94 47.9
Sabra04G0030300 Salix brachista HOM05D007160 ORTHO05D005331 2.0e-11 73.9 302 42.1
arahy.Tifrunner.gnm1.ann1.704E4A Arachis hypogaea HOM05D007160 ORTHO05D005331 2.6e-11 73.6 215 43.7
CiPaw.10G052400 Carya illinoinensis HOM05D007160 ORTHO05D005331 2.6e-11 73.6 94 53.2
FAN21G2372 Fragaria x ananassa HOM05D007160 ORTHO05D005331 2.6e-11 73.6 89 52.8
Dinv17351 Davidia involucrata HOM05D007160 ORTHO05D005331 3.3e-11 73.2 193 35.2
Gohir.D10G028200 Gossypium hirsutum HOM05D007160 ORTHO05D005331 4.4e-11 72.8 298 35.6
Nitab4.5_0001375g0120 Nicotiana tabacum HOM05D007160 ORTHO05D005331 4.4e-11 72.8 83 50.6
FAN16G2322 Fragaria x ananassa HOM05D007160 ORTHO05D005331 5.7e-11 72.4 89 51.7
Nitab4.5_0000516g0090 Nicotiana tabacum HOM05D007160 ORTHO05D005331 5.7e-11 72.4 94 47.9
Prupe.4G052200 Prunus persica HOM05D007160 ORTHO05D005331 5.7e-11 72.4 294 37.8
FvH4_3g08671 Fragaria vesca HOM05D007160 ORTHO05D005331 9.7e-11 71.6 89 51.7
FAN11G0877 Fragaria x ananassa HOM05D007160 ORTHO05D005331 9.7e-11 71.6 89 51.7
Potri.011G057500 Populus trichocarpa HOM05D007160 ORTHO05D005331 9.7e-11 71.6 283 39.9
DCAR_008006 Daucus carota HOM05D007160 ORTHO05D005331 1.3e-10 71.2 93 47.3
Nitab4.5_0000516g0070 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.3e-10 71.2 90 48.9
VMungo0251G1795 Vigna mungo HOM05D007160 ORTHO05D005331 1.3e-10 71.2 91 53.8
Lalb_Chr20g0121591 Lupinus albus HOM05D007160 ORTHO05D005331 1.7e-10 70.9 93 53.8
Gohir.D05G162000 Gossypium hirsutum HOM05D007160 ORTHO05D005331 3.7e-10 69.7 217 32.7
Medtr4g088385 Medicago truncatula HOM05D007160 ORTHO05D005331 4.8e-10 69.3 91 50.5
VMungo0540G2483 Vigna mungo HOM05D007160 ORTHO05D005331 4.8e-10 69.3 289 34.6
Gorai.009G167000 Gossypium raimondii HOM05D007160 ORTHO05D005331 6.3e-10 68.9 217 30.9
Manes.17G049000 Manihot esculenta HOM05D007160 ORTHO05D005331 6.3e-10 68.9 290 44.8
Glyma.13G175300 Glycine max HOM05D007160 ORTHO05D005331 8.2e-10 68.6 91 53.8
Lj6g0014856 Lotus japonicus HOM05D007160 ORTHO05D005331 8.2e-10 68.6 93 55.9
Ca_18588_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 1.1e-09 68.2 89 50.6
Hma1.2p1_0558F.1_g178530 Hydrangea macrophylla HOM05D007160 ORTHO05D005331 1.1e-09 68.2 302 37.4
Medtr2g014400 Medicago truncatula HOM05D007160 ORTHO05D005331 1.4e-09 67.8 228 30.7
ECA236G4287 Erigeron canadensis HOM05D007160 ORTHO05D005331 1.8e-09 67.4 89 44.9
TPR.G19911 Trifolium pratense HOM05D007160 ORTHO05D005331 1.8e-09 67.4 92 48.9
Glyma.07G201100 Glycine max HOM05D007160 ORTHO05D005331 2.4e-09 67.0 91 52.7
Sc17g0005960 Simmondsia chinensis HOM05D028926 ORTHO05D005331 2.4e-09 67.0 281 30.2
TAR627G1090 Trochodendron aralioides HOM05D018497 ORTHO05D005331 2.4e-09 67.0 101 50.5
Cpa.g.sc27.8 Carica papaya HOM05D007160 ORTHO05D005331 4.1e-09 66.2 323 35.3
Lsat_1_v5_gn_7_22701 Lactuca sativa HOM05D007160 ORTHO05D005331 4.1e-09 66.2 70 57.1
Peaxi162Scf00926g00031 Petunia axillaris HOM05D007160 ORTHO05D005331 4.1e-09 66.2 83 45.8
Glyma.15G077600 Glycine max HOM05D007160 ORTHO05D005331 5.3e-09 65.9 281 38.4
Oeu014779.1 Olea europaea HOM05D007160 ORTHO05D005331 7.0e-09 65.5 230 35.7
Actinidia16571 Actinidia chinensis HOM05D007160 ORTHO05D005331 1.2e-08 64.7 93 47.3
Nitab4.5_0004359g0050 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.2e-08 64.7 94 43.6
TAR624G0339 Trochodendron aralioides HOM05D007160 ORTHO05D005331 1.2e-08 64.7 208 33.2
SalBow8G2878 Salvia bowleyana HOM05D007160 ORTHO05D005331 2.0e-08 63.9 89 47.2
SalBow8G4606 Salvia bowleyana HOM05D007160 ORTHO05D005331 2.0e-08 63.9 89 47.2
arahy.Tifrunner.gnm1.ann1.AUV6LD Arachis hypogaea HOM05D007160 ORTHO05D005331 2.6e-08 63.5 222 38.7
MSTRG.15854 Avicennia marina HOM05D007160 ORTHO05D005331 2.6e-08 63.5 249 28.9
Glyma.13G236100 Glycine max HOM05D007160 ORTHO05D005331 2.6e-08 63.5 293 36.5
Gohir.A05G159300 Gossypium hirsutum HOM05D007160 ORTHO05D005331 3.5e-08 63.2 86 52.3
Prupe.4G052000 Prunus persica HOM05D007160 ORTHO05D005331 4.5e-08 62.8 96 51.0
Peaxi162Scf01018g00012 Petunia axillaris HOM05D007160 ORTHO05D005331 7.7e-08 62.0 89 46.1
PGSC0003DMG400031775 Solanum tuberosum HOM05D007160 ORTHO05D005331 7.7e-08 62.0 90 41.1
MD10G1289700 Malus domestica HOM05D007160 ORTHO05D005331 1.0e-07 61.6 94 47.9
Nitab4.5_0001955g0170 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.0e-07 61.6 86 44.2
CANSAT35G1941 Cannabis sativa HOM05D007160 ORTHO05D005331 1.3e-07 61.2 229 36.7
Sabra11G0039600 Salix brachista HOM05D007160 ORTHO05D005331 2.9e-07 60.1 236 34.3
CAN.G529.50 Capsicum annuum HOM05D007160 ORTHO05D005331 5.0e-07 59.3 94 38.3
MD05G1310400 Malus domestica HOM05D007160 ORTHO05D005331 5.0e-07 59.3 321 32.4
SalBow8G5472 Salvia bowleyana HOM05D007160 ORTHO05D005331 8.5e-07 58.5 290 29.0
Manes.16G031700 Manihot esculenta HOM05D007160 ORTHO05D005331 1.5e-06 57.8 85 45.9
Nitab4.5_0006098g0020 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.5e-06 57.8 77 45.5
PGSC0003DMG400022807 Solanum tuberosum HOM05D007160 ORTHO05D005331 3.2e-06 56.6 86 43.0
TWI63G1823 Tripterygium wilfordii HOM05D007160 ORTHO05D005331 3.2e-06 56.6 328 33.8


User provided reference genes

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