Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0008091 Sechium edule HOM05D000860 ORTHO05D005731 1.1e-142 510.0 255 100.0
CsaV3_6G039460 Cucumis sativus L. HOM05D000860 ORTHO05D005731 2.0e-93 346.3 259 67.6
ClCG04G008950 Citrullus lanatus HOM05D000860 ORTHO05D005731 3.0e-89 332.4 259 66.8
MELO3C014247.2 Cucumis melo HOM05D000860 ORTHO05D005731 9.7e-88 327.4 261 65.9
ClCG10G020360 Citrullus lanatus HOM05D000860 ORTHO05D005731 5.1e-44 182.2 264 43.9
Cfa017540 Carpinus fangiana HOM05D000860 ORTHO05D005731 4.7e-42 175.6 248 46.0
Sed0021746 Sechium edule HOM05D000860 ORTHO05D005731 1.8e-41 173.7 235 45.5
Prupe.6G237600 Prunus persica HOM05D000860 ORTHO05D005731 8.9e-41 171.4 249 45.0
CsaV3_3G035740 Cucumis sativus L. HOM05D000860 ORTHO05D005731 1.5e-40 170.6 249 44.2
MELO3C009334.2 Cucumis melo HOM05D000860 ORTHO05D005731 2.0e-40 170.2 249 43.8
FAN02G4050 Fragaria x ananassa HOM05D000860 ORTHO05D005731 3.4e-40 169.5 246 45.1
FvH4_6g15740 Fragaria vesca HOM05D000860 ORTHO05D005731 5.8e-40 168.7 246 44.7
FAN14G5122 Fragaria x ananassa HOM05D000860 ORTHO05D005731 7.6e-40 168.3 246 44.7
QL07p044635 Quercus lobata HOM05D000860 ORTHO05D005731 7.6e-40 168.3 250 45.6
FAN09G1893 Fragaria x ananassa HOM05D000860 ORTHO05D005731 9.9e-40 167.9 246 44.7
FAN14G4874 Fragaria x ananassa HOM05D000860 ORTHO05D005731 9.9e-40 167.9 246 44.7
FAN05G3398 Fragaria x ananassa HOM05D000860 ORTHO05D005731 1.3e-39 167.5 246 44.7
Haze_20609 Corylus avellana HOM05D000860 ORTHO05D005731 1.7e-39 167.2 248 45.6
MD04G1099200 Malus domestica HOM05D000860 ORTHO05D005731 2.2e-39 166.8 249 45.4
RcHm_v2.0_Chr3g0469451 Rosa chinensis HOM05D000860 ORTHO05D005731 3.8e-39 166.0 248 43.5
CiPaw.10G134300 Carya illinoinensis HOM05D000860 ORTHO05D005731 3.2e-38 162.9 249 42.2
MD12G1119800 Malus domestica HOM05D000860 ORTHO05D005731 3.5e-37 159.5 249 44.6
Lalb_Chr01g0018861 Lupinus albus HOM05D000860 ORTHO05D005731 3.1e-33 146.4 249 39.4
Thecc.05G057900 Theobroma cacao HOM05D000860 ORTHO05D005731 4.4e-32 142.5 251 40.2
COL.COLO4_27038 Corchorus olitorius HOM05D000860 ORTHO05D005731 7.6e-32 141.7 251 39.4
Duzib128G0216 Durio zibethinus HOM05D000860 ORTHO05D005731 9.9e-32 141.4 251 40.6
Duzib093G2042 Durio zibethinus HOM05D000860 ORTHO05D005731 2.2e-31 140.2 251 39.8
Ciclev10011672m.g Citrus clementina HOM05D000860 ORTHO05D005731 6.4e-31 138.7 249 39.4
Lalb_Chr06g0171491 Lupinus albus HOM05D000860 ORTHO05D005731 1.4e-30 137.5 250 38.0
TPR.G21211 Trifolium pratense HOM05D000860 ORTHO05D005731 7.1e-30 135.2 246 37.4
Lj5g0023643 Lotus japonicus HOM05D000860 ORTHO05D005731 2.1e-29 133.7 255 38.8
CANSAT80G1090 Cannabis sativa HOM05D000860 ORTHO05D005731 4.6e-29 132.5 249 37.8
VMungo0720G0157 Vigna mungo HOM05D000860 ORTHO05D005731 1.3e-28 131.0 244 35.2
Atru.chr8.1875 Acer truncatum HOM05D000860 ORTHO05D005731 2.3e-28 130.2 246 39.0
Eucgr.A01156 Eucalyptus grandis HOM05D000860 ORTHO05D005731 3.0e-28 129.8 257 37.4
CiPaw.09G177100 Carya illinoinensis HOM05D000860 ORTHO05D005731 8.7e-28 128.3 182 44.0
TPR.G21206 Trifolium pratense HOM05D000860 ORTHO05D005731 2.5e-27 126.7 244 35.2
Glyma.10G051900 Glycine max HOM05D000860 ORTHO05D005731 4.3e-27 125.9 248 36.3
Medtr1g064690 Medicago truncatula HOM05D000860 ORTHO05D005731 9.6e-27 124.8 235 38.3
TWI74G0048 Tripterygium wilfordii HOM05D000860 ORTHO05D005731 2.1e-26 123.6 235 36.6
arahy.Tifrunner.gnm1.ann1.7R2GAN Arachis hypogaea HOM05D000860 ORTHO05D005731 6.2e-26 122.1 249 37.3
Potri.006G128800 Populus trichocarpa HOM05D000860 ORTHO05D005731 6.2e-26 122.1 253 37.5
Medtr7g101130 Medicago truncatula HOM05D000860 ORTHO05D005731 1.4e-25 120.9 255 38.4
arahy.Tifrunner.gnm1.ann1.AHVV25 Arachis hypogaea HOM05D000860 ORTHO05D005731 1.8e-25 120.6 249 36.5
Sabra06G0101400 Salix brachista HOM05D000860 ORTHO05D005731 2.4e-25 120.2 253 36.8
Psat6g067960 Pisum sativum HOM05D000860 ORTHO05D005731 3.1e-25 119.8 251 35.5
Phvul.007G221200 Phaseolus vulgaris HOM05D000860 ORTHO05D005731 5.3e-25 119.0 248 33.9
RcHm_v2.0_Chr7g0226531 Rosa chinensis HOM05D000860 ORTHO05D005731 5.3e-25 119.0 169 45.0
Glyma.13G139300 Glycine max HOM05D000860 ORTHO05D005731 6.9e-25 118.6 241 37.3
TWI53G0334 Tripterygium wilfordii HOM05D000860 ORTHO05D005731 9.0e-25 118.2 235 37.4
Gorai.013G027100 Gossypium raimondii HOM05D000860 ORTHO05D005731 2.0e-24 117.1 229 35.8
Manes.08G006300 Manihot esculenta HOM05D000860 ORTHO05D005731 2.0e-24 117.1 249 35.7
Nn2g10774 Nelumbo nucifera HOM05D000860 ORTHO05D005731 2.0e-24 117.1 247 35.6
Gohir.A13G025400 Gossypium hirsutum HOM05D000860 ORTHO05D005731 2.6e-24 116.7 229 35.8
Psat3g043560 Pisum sativum HOM05D000860 ORTHO05D005731 4.5e-24 115.9 251 36.7
TAR623G0466 Trochodendron aralioides HOM05D000860 ORTHO05D005731 4.5e-24 115.9 256 35.9
Lj1g0015108 Lotus japonicus HOM05D000860 ORTHO05D005731 2.2e-23 113.6 249 36.1
Gohir.D13G024000 Gossypium hirsutum HOM05D000860 ORTHO05D005731 2.9e-23 113.2 229 35.4
Ca_08841_v3 Cicer arietinum L. HOM05D000860 ORTHO05D005731 3.2e-22 109.8 249 36.1
Hma1.2p1_1031F.1_g249970 Hydrangea macrophylla HOM05D000860 ORTHO05D005731 9.3e-22 108.2 251 35.9
TPR.G18266 Trifolium pratense HOM05D000860 ORTHO05D005731 1.6e-21 107.5 253 36.4
Sabra16G0094600 Salix brachista HOM05D000860 ORTHO05D005731 7.9e-21 105.1 239 35.6
Potri.016G088900 Populus trichocarpa HOM05D000860 ORTHO05D005731 1.0e-20 104.8 239 33.9
Gohir.A01G215400 Gossypium hirsutum HOM05D000860 ORTHO05D005731 1.3e-20 104.4 222 36.0
Manes.09G068966 Manihot esculenta HOM05D000860 ORTHO05D005731 1.3e-20 104.4 169 40.8
VMungo1383G0750 Vigna mungo HOM05D000860 ORTHO05D005731 1.3e-20 104.4 244 36.9
vmacro14442 Vaccinium macrocarpon HOM05D000860 ORTHO05D005731 3.0e-20 103.2 250 34.4
CSS0027524 Camellia sinensis var. sinensis HOM05D000860 ORTHO05D005731 5.1e-20 102.4 249 33.3
CSS0043489 Camellia sinensis var. sinensis HOM05D000860 ORTHO05D005731 5.1e-20 102.4 249 33.3
AUR62042284 Chenopodium quinoa HOM05D000860 ORTHO05D005731 5.1e-20 102.4 251 31.5
Glyma.03G180300 Glycine max HOM05D000860 ORTHO05D005731 5.1e-20 102.4 245 35.5
Gorai.002G248500 Gossypium raimondii HOM05D000860 ORTHO05D005731 8.7e-20 101.7 222 35.1
Glyma.19G181000 Glycine max HOM05D000860 ORTHO05D005731 2.5e-19 100.1 247 36.4
AUR62040362 Chenopodium quinoa HOM05D000860 ORTHO05D005731 5.6e-19 99.0 256 31.2
Rhsim01G0217500 Rhododendron simsii HOM05D000860 ORTHO05D005731 1.6e-18 97.4 255 34.9
EL10Ac7g16545 Beta vulgaris HOM05D000860 ORTHO05D005731 4.8e-18 95.9 239 32.2
Ca_11464_v3 Cicer arietinum L. HOM05D000860 ORTHO05D005731 4.8e-18 95.9 186 37.6
Ah.15g092300 Amaranthus hybridus HOM05D000860 ORTHO05D005731 1.4e-17 94.4 251 31.5
Phvul.001G176600 Phaseolus vulgaris HOM05D000860 ORTHO05D005731 4.0e-17 92.8 232 33.6
Peaxi162Scf00270g00092 Petunia axillaris HOM05D000860 ORTHO05D005731 9.0e-17 91.7 255 32.9
Lsat_1_v5_gn_6_46140 Lactuca sativa HOM05D000860 ORTHO05D005731 2.6e-16 90.1 251 32.7
Migut.O00631 Erythranthe guttata HOM05D000860 ORTHO05D005731 4.5e-16 89.4 243 31.7
MBI10_g20798_MAGBIO Magnolia biondii HOM05D000860 ORTHO05D005731 4.5e-16 89.4 259 31.7
RcHm_v2.0_Chr1g0337551 Rosa chinensis HOM05D000860 ORTHO05D005731 1.3e-15 87.8 139 43.9
THA.LOC104816335 Tarenaya hassleriana HOM05D000860 ORTHO05D005731 1.7e-15 87.4 240 29.6
PSO063G2151 Papaver somniferum HOM05D000860 ORTHO05D005731 3.8e-15 86.3 254 31.9
Sc20g0005200 Simmondsia chinensis HOM05D000860 ORTHO05D005731 4.9e-15 85.9 255 30.2
CAN.G631.19 Capsicum annuum HOM05D000860 ORTHO05D005731 6.5e-15 85.5 258 32.9
DCAR_018816 Daucus carota HOM05D000860 ORTHO05D005731 6.5e-15 85.5 250 31.6
PSO339G5579 Papaver somniferum HOM05D000860 ORTHO05D005731 6.5e-15 85.5 254 31.5
Gohir.D01G204000 Gossypium hirsutum HOM05D000860 ORTHO05D005731 8.4e-15 85.1 140 42.1
Solyc11g069330.1 Solanum lycopersicum HOM05D000860 ORTHO05D005731 1.1e-14 84.7 257 31.9
Sopen11g028050 Solanum pennellii HOM05D000860 ORTHO05D005731 1.1e-14 84.7 257 31.9
Nitab4.5_0000650g0160 Nicotiana tabacum HOM05D000860 ORTHO05D005731 1.4e-14 84.3 255 30.6
PGSC0003DMG400008059 Solanum tuberosum HOM05D000860 ORTHO05D005731 1.9e-14 84.0 257 31.5
Aqoxy1G01248 Aquilegia oxysepala HOM05D000860 ORTHO05D005731 3.2e-14 83.2 253 30.4
AT3G53400 Arabidopsis thaliana HOM05D000860 ORTHO05D005731 3.2e-14 83.2 250 28.8
SalBow3G0016 Salvia bowleyana HOM05D000860 ORTHO05D005731 3.2e-14 83.2 251 32.7
Sp5g08940 Schrenkiella parvula HOM05D000860 ORTHO05D005731 3.2e-14 83.2 251 29.5
Thhalv10011158m.g Eutrema salsugineum HOM05D000860 ORTHO05D005731 5.5e-14 82.4 254 30.3
Nitab4.5_0003701g0030 Nicotiana tabacum HOM05D000860 ORTHO05D005731 7.1e-14 82.0 255 30.2
SGA_v2.0_scaffold97G29220 Striga asiatica HOM05D000860 ORTHO05D005731 9.3e-14 81.6 254 30.3
THA.LOC104806503 Tarenaya hassleriana HOM05D000860 ORTHO05D005731 9.3e-14 81.6 253 28.5
QL09p001288 Quercus lobata HOM05D000860 ORTHO05D005731 1.2e-13 81.3 136 44.1
Aa31LG10G8580 Aethionema arabicum HOM05D000860 ORTHO05D005731 2.1e-13 80.5 235 29.4
ATR0115G014 Amborella trichopoda HOM05D000860 ORTHO05D005731 2.1e-13 80.5 243 31.7
Oeu001264.1 Olea europaea HOM05D000860 ORTHO05D005731 2.7e-13 80.1 256 30.9
CARHR163310 Cardamine hirsuta HOM05D000860 ORTHO05D005731 6.0e-13 79.0 250 28.4
DCAR_022736 Daucus carota HOM05D000860 ORTHO05D005731 1.0e-12 78.2 161 34.2
Carub.0005s1996 Capsella rubella HOM05D000860 ORTHO05D005731 1.3e-12 77.8 252 29.4
A04p06160 Brassica napus HOM05D000860 ORTHO05D005731 1.8e-12 77.4 254 28.7
BolC4t25490H Brassica oleracea HOM05D000860 ORTHO05D005731 1.8e-12 77.4 190 31.6
Migut.D02216 Erythranthe guttata HOM05D000860 ORTHO05D005731 1.8e-12 77.4 284 29.2
C04p39180 Brassica napus HOM05D000860 ORTHO05D005731 2.3e-12 77.0 242 29.3
BraA04t16319Z Brassica rapa HOM05D000860 ORTHO05D005731 3.9e-12 76.3 254 28.7
AL5G34320 Arabidopsis lyrata HOM05D000860 ORTHO05D005731 5.1e-12 75.9 249 28.5
BcaC02g09168 Brassica carinata HOM05D000860 ORTHO05D005731 5.1e-12 75.9 257 28.4
HanXRQChr13g0403481 Helianthus annuus HOM05D000860 ORTHO05D005731 6.7e-12 75.5 160 35.6
Cc01_g11220 Coffea canephora HOM05D000860 ORTHO05D005731 8.7e-12 75.1 260 30.4
Lsat_1_v5_gn_1_65400 Lactuca sativa HOM05D000860 ORTHO05D005731 2.1e-10 70.5 171 31.0
BcaB02g08527 Brassica carinata HOM05D000860 ORTHO05D005731 4.8e-10 69.3 266 30.5
Aa31LG1G21890 Aethionema arabicum HOM05D000860 ORTHO05D005731 3.1e-09 66.6 232 27.2
AT5G03190 Arabidopsis thaliana HOM05D000860 ORTHO05D005731 3.1e-09 66.6 236 28.4
ECA233G3204 Erigeron canadensis HOM05D000860 ORTHO05D005731 5.3e-09 65.9 152 35.5
SalBow3G3227 Salvia bowleyana HOM05D000860 ORTHO05D005731 9.0e-09 65.1 157 34.4
AL6G12470 Arabidopsis lyrata HOM05D000860 ORTHO05D005731 1.5e-08 64.3 232 28.9
CARHR210160 Cardamine hirsuta HOM05D000860 ORTHO05D005731 2.6e-08 63.5 241 27.4
ECA248G3821 Erigeron canadensis HOM05D000860 ORTHO05D005731 2.6e-08 63.5 134 37.3
unitig_22.g6662 Utricularia gibba HOM05D000860 ORTHO05D005731 2.6e-08 63.5 167 34.1
Nn1g03119 Nelumbo nucifera HOM05D000860 ORTHO05D005731 3.4e-08 63.2 92 44.6
Actinidia20451 Actinidia chinensis HOM05D000860 ORTHO05D005731 1.0e-07 61.6 86 46.5
Psat7g004640 Pisum sativum HOM05D000860 ORTHO05D005731 2.9e-07 60.1 119 38.7
Psat6g084760 Pisum sativum HOM05D000860 ORTHO05D005731 6.5e-07 58.9 118 39.8
Nn7g37700 Nelumbo nucifera HOM05D000860 ORTHO05D026722 1.1e-06 58.2 134 36.6


User provided reference genes

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