Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0007907 Sechium edule HOM05D005417 ORTHO05D002591 2.9e-133 478.8 280 100.0
MELO3C021078.2 Cucumis melo HOM05D005417 ORTHO05D002591 4.5e-54 215.7 284 56.7
ClCG09G008640 Citrullus lanatus HOM05D005417 ORTHO05D002591 2.8e-51 206.5 283 55.8
QL09p051098 Quercus lobata HOM05D005417 ORTHO05D002591 5.1e-13 79.3 383 28.5
PGSC0003DMG400022034 Solanum tuberosum HOM05D005417 ORTHO05D002591 6.6e-13 79.0 334 29.9
QL09p050923 Quercus lobata HOM05D005417 ORTHO05D002591 1.5e-12 77.8 382 28.5
Oeu007785.1 Olea europaea HOM05D005417 ORTHO05D002591 2.5e-12 77.0 339 29.8
Nitab4.5_0002985g0020 Nicotiana tabacum HOM05D005417 ORTHO05D002591 2.4e-10 70.5 347 27.4
Dinv19167 Davidia involucrata HOM05D005417 ORTHO05D002591 3.1e-10 70.1 360 28.9
TAR365G0760 Trochodendron aralioides HOM05D005417 ORTHO05D002591 2.0e-09 67.4 119 47.9
CSS0019537 Camellia sinensis var. sinensis HOM05D005417 ORTHO05D002591 1.3e-08 64.7 404 26.5
Ca_03471_v3 Cicer arietinum L. HOM05D005417 ORTHO05D002591 4.9e-08 62.8 122 43.4
Lalb_Chr03g0041401 Lupinus albus HOM05D005417 ORTHO05D002591 1.9e-07 60.8 103 38.8
BraA07t28509Z Brassica rapa HOM05D005417 ORTHO05D002591 2.4e-07 60.5 370 30.3
MELO3C022719.2 Cucumis melo HOM05D005417 ORTHO05D002591 2.4e-07 60.5 122 42.6
Glyma.08G348101 Glycine max HOM05D005417 ORTHO05D002591 7.1e-07 58.9 120 35.0
Medtr7g055560 Medicago truncatula HOM05D005417 ORTHO05D002591 7.1e-07 58.9 121 37.2
Medtr7g055747 Medicago truncatula HOM05D005417 ORTHO05D002591 7.1e-07 58.9 121 37.2
Gorai.001G188400 Gossypium raimondii HOM05D005417 ORTHO05D002591 9.3e-07 58.5 345 27.2
arahy.Tifrunner.gnm1.ann1.K8JSLF Arachis hypogaea HOM05D005417 ORTHO05D002591 1.2e-06 58.2 120 35.8
CiPaw.13G049000 Carya illinoinensis HOM05D005417 ORTHO05D002591 1.2e-06 58.2 119 47.9
Sabra02G0187500 Salix brachista HOM05D005417 ORTHO05D002591 1.6e-06 57.8 120 36.7
Potri.002G246400 Populus trichocarpa HOM05D005417 ORTHO05D002591 2.7e-06 57.0 120 35.8
Rhsim01G0253400 Rhododendron simsii HOM05D005417 ORTHO05D002591 2.7e-06 57.0 58 60.3
Nitab4.5_0013864g0020 Nicotiana tabacum HOM05D005417 ORTHO05D002591 3.5e-06 56.6 105 38.1
TAR636G0419 Trochodendron aralioides HOM05D005417 ORTHO05D002591 3.5e-06 56.6 108 41.7
CAN.G181.55 Capsicum annuum HOM05D005417 ORTHO05D002591 4.6e-06 56.2 121 36.4
CiPaw.14G038800 Carya illinoinensis HOM05D005417 ORTHO05D002591 4.6e-06 56.2 147 34.7
Prupe.8G197900 Prunus persica HOM05D005417 ORTHO05D002591 4.6e-06 56.2 105 44.8
Actinidia39427 Actinidia chinensis HOM05D005417 ORTHO05D002591 6.0e-06 55.8 122 36.1
Aa31sc95G70 Aethionema arabicum HOM05D005417 ORTHO05D002591 6.0e-06 55.8 336 26.8
COL.COLO4_08651 Corchorus olitorius HOM05D005417 ORTHO05D002591 6.0e-06 55.8 116 38.8
Nitab4.5_0003020g0050 Nicotiana tabacum HOM05D005417 ORTHO05D002591 6.0e-06 55.8 105 38.1
SEGI_26671 Sequoiadendron giganteum HOM05D038370 ORTHO05D037583 6.0e-06 55.8 96 41.7
C07p10920 Brassica napus HOM05D005417 ORTHO05D002591 7.9e-06 55.5 370 30.5
Gohir.A11G139800 Gossypium hirsutum HOM05D005417 ORTHO05D002591 7.9e-06 55.5 102 42.2


User provided reference genes

Program Settings