Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0007887 Sechium edule HOM05D006640 ORTHO05D008078 2.2e-82 308.9 157 100.0
ClCG02G003390 Citrullus lanatus HOM05D006640 ORTHO05D008078 5.0e-58 228.0 148 78.4
CsaV3_7G001930 Cucumis sativus L. HOM05D006640 ORTHO05D008078 1.3e-55 219.9 148 75.7
MELO3C013247.2 Cucumis melo HOM05D006640 ORTHO05D008078 1.1e-54 216.9 148 73.6
Migut.E01492 Erythranthe guttata HOM05D006640 ORTHO05D008078 3.3e-38 162.2 141 61.0
Eucgr.F01788 Eucalyptus grandis HOM05D006640 ORTHO05D008078 9.7e-38 160.6 145 58.6
CiPaw.07G136100 Carya illinoinensis HOM05D006640 ORTHO05D008078 6.3e-37 157.9 146 57.5
EL10Ac3g05131 Beta vulgaris HOM05D006640 ORTHO05D008078 5.3e-36 154.8 142 56.3
RcHm_v2.0_Chr7g0215911 Rosa chinensis HOM05D006640 ORTHO05D008078 5.3e-36 154.8 145 58.6
FAN18G3620 Fragaria x ananassa HOM05D006640 ORTHO05D008078 1.2e-35 153.7 145 58.6
FvH4_5g25620 Fragaria vesca HOM05D006640 ORTHO05D008078 1.6e-35 153.3 145 58.6
Cfa010319 Carpinus fangiana HOM05D006640 ORTHO05D008078 3.5e-35 152.1 134 60.4
QL02p015123 Quercus lobata HOM05D006640 ORTHO05D008078 5.9e-35 151.4 146 56.2
Hma1.2p1_0612F.1_g188900 Hydrangea macrophylla HOM05D006640 ORTHO05D008078 7.7e-35 151.0 146 54.8
Haze_19181 Corylus avellana HOM05D006640 ORTHO05D008078 1.0e-34 150.6 146 56.8
FAN04G1358 Fragaria x ananassa HOM05D006640 ORTHO05D008078 1.0e-34 150.6 145 57.2
MD15G1440200 Malus domestica HOM05D006640 ORTHO05D008078 1.0e-34 150.6 146 57.5
GSVIVG01013394001 Vitis vinifera HOM05D006640 ORTHO05D008078 2.2e-34 149.4 146 54.1
Cc10_g14910 Coffea canephora HOM05D006640 ORTHO05D008078 6.5e-34 147.9 146 52.7
Atru.chr3.582 Acer truncatum HOM05D006640 ORTHO05D008078 1.5e-33 146.7 146 54.8
CAN.G1138.9 Capsicum annuum HOM05D006640 ORTHO05D008078 1.9e-33 146.4 146 53.4
Manes.13G069100 Manihot esculenta HOM05D006640 ORTHO05D008078 1.9e-33 146.4 146 53.4
Potri.005G253200 Populus trichocarpa HOM05D006640 ORTHO05D008078 1.9e-33 146.4 155 52.3
MSTRG.990 Avicennia marina HOM05D006640 ORTHO05D008078 4.2e-33 145.2 146 54.1
Hund21079 Selenicereus undatus HOM05D006640 ORTHO05D008078 5.5e-33 144.8 145 55.9
Cfa020797 Carpinus fangiana HOM05D006640 ORTHO05D008078 7.2e-33 144.4 134 58.2
Lalb_Chr01g0007731 Lupinus albus HOM05D006640 ORTHO05D008078 7.2e-33 144.4 151 49.7
CSS0000785 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 1.2e-32 143.7 146 53.4
Prupe.5G009200 Prunus persica HOM05D006640 ORTHO05D008078 1.2e-32 143.7 146 55.5
Thecc.03G029100 Theobroma cacao HOM05D006640 ORTHO05D008078 1.2e-32 143.7 151 52.3
Ciclev10002549m.g Citrus clementina HOM05D006640 ORTHO05D008078 1.6e-32 143.3 146 54.1
Oeu011315.3 Olea europaea HOM05D006640 ORTHO05D008078 1.6e-32 143.3 145 51.7
FAN08G2005 Fragaria x ananassa HOM05D006640 ORTHO05D008078 2.1e-32 142.9 133 59.4
Nn5g31001 Nelumbo nucifera HOM05D006640 ORTHO05D008078 4.7e-32 141.7 146 52.7
SalBow1G3286 Salvia bowleyana HOM05D006640 ORTHO05D008078 8.0e-32 141.0 142 51.4
Aa31LG9G12490 Aethionema arabicum HOM05D006640 ORTHO05D008078 1.4e-31 140.2 146 48.6
TAR625G0363 Trochodendron aralioides HOM05D006640 ORTHO05D008078 1.4e-31 140.2 145 50.3
Sopen04g036190 Solanum pennellii HOM05D006640 ORTHO05D008078 2.3e-31 139.4 146 50.7
SalBow7G4342 Salvia bowleyana HOM05D006640 ORTHO05D008078 4.0e-31 138.7 142 50.7
Solyc04g082560.4 Solanum lycopersicum HOM05D001842 ORTHO05D001849 5.2e-31 138.3 146 50.7
Solyc08g069130.1 Solanum lycopersicum HOM05D006640 ORTHO05D008078 5.2e-31 138.3 146 50.7
SGA_v2.0_scaffold184G39969 Striga asiatica HOM05D006640 ORTHO05D008078 8.8e-31 137.5 151 52.3
CANSAT54G1336 Cannabis sativa HOM05D006640 ORTHO05D008078 1.2e-30 137.1 146 50.7
Lj6g0027905 Lotus japonicus HOM05D006640 ORTHO05D008078 2.0e-30 136.3 145 48.3
Peaxi162Scf00680g00119 Petunia axillaris HOM05D006640 ORTHO05D008078 2.0e-30 136.3 142 49.3
SalBow6G0872 Salvia bowleyana HOM05D006640 ORTHO05D008078 7.5e-30 134.4 139 52.5
PGR083G0938 Punica granatum HOM05D006640 ORTHO05D008078 1.3e-29 133.7 146 51.4
TPR.G34155 Trifolium pratense HOM05D006640 ORTHO05D008078 1.3e-29 133.7 145 51.0
vmacro05542 Vaccinium macrocarpon HOM05D006640 ORTHO05D008078 8.2e-29 131.0 133 54.1
THA.LOC104820569 Tarenaya hassleriana HOM05D006640 ORTHO05D008078 1.1e-28 130.6 139 51.8
DCAR_013930 Daucus carota HOM05D006640 ORTHO05D008078 1.8e-28 129.8 153 49.0
CDE02G0900 Ceratophyllum demersum HOM05D006640 ORTHO05D008078 2.4e-28 129.4 146 49.3
COL.COLO4_22727 Corchorus olitorius HOM05D006640 ORTHO05D008078 3.1e-28 129.0 135 49.6
HanXRQChr05g0147651 Helianthus annuus HOM05D006640 ORTHO05D008078 3.1e-28 129.0 146 47.3
MBI06_g19633_MAGBIO Magnolia biondii HOM05D006640 ORTHO05D008078 4.1e-28 128.6 145 48.3
Carub.0008s0481 Capsella rubella HOM05D006640 ORTHO05D008078 5.3e-28 128.3 146 45.9
Duzib205G0266 Durio zibethinus HOM05D006640 ORTHO05D008078 5.3e-28 128.3 135 51.9
Medtr4g032370 Medicago truncatula HOM05D006640 ORTHO05D008078 5.3e-28 128.3 155 46.5
Nitab4.5_0001208g0130 Nicotiana tabacum HOM05D006640 ORTHO05D008078 5.3e-28 128.3 116 56.9
AL8G16350 Arabidopsis lyrata HOM05D006640 ORTHO05D008078 7.0e-28 127.9 146 45.2
ECA232G3411 Erigeron canadensis HOM05D006640 ORTHO05D008078 7.0e-28 127.9 146 47.3
Psat7g226480 Pisum sativum HOM05D006640 ORTHO05D008078 7.0e-28 127.9 155 45.2
Aqoxy6G01598 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 9.1e-28 127.5 147 47.6
AT5G43822 Arabidopsis thaliana HOM05D006640 ORTHO05D008078 9.1e-28 127.5 146 46.6
Thhalv10003275m.g Eutrema salsugineum HOM05D006640 ORTHO05D008078 2.7e-27 125.9 146 47.3
Gorai.006G062900 Gossypium raimondii HOM05D006640 ORTHO05D008078 4.5e-27 125.2 157 45.2
HanXRQChr02g0057271 Helianthus annuus HOM05D006640 ORTHO05D008078 1.7e-26 123.2 145 44.8
AUR62005948 Chenopodium quinoa HOM05D006640 ORTHO05D008078 2.2e-26 122.9 133 50.4
CARHR179670 Cardamine hirsuta HOM05D006640 ORTHO05D008078 5.0e-26 121.7 146 43.8
Phvul.006G070300 Phaseolus vulgaris HOM05D006640 ORTHO05D008078 6.5e-26 121.3 139 46.0
BcaC06g34624 Brassica carinata HOM05D006640 ORTHO05D008078 8.5e-26 120.9 146 45.2
Medtr1g103240 Medicago truncatula HOM05D006640 ORTHO05D008078 1.1e-25 120.6 155 43.9
Glyma.08G337400 Glycine max HOM05D001876 ORTHO05D002002 1.5e-25 120.2 145 43.4
Os10g0566900 Oryza sativa ssp. japonica HOM05D006640 ORTHO05D008078 1.5e-25 120.2 139 44.6
FAN13G1910 Fragaria x ananassa HOM05D006640 ORTHO05D008078 1.9e-25 119.8 180 43.3
Nitab4.5_0000383g0410 Nicotiana tabacum HOM05D006640 ORTHO05D008078 1.9e-25 119.8 103 60.2
Gohir.A09G046800 Gossypium hirsutum HOM05D006640 ORTHO05D008078 2.5e-25 119.4 157 43.9
BcaC06g31675 Brassica carinata HOM05D006640 ORTHO05D008078 3.2e-25 119.0 140 45.7
VMungo0540G0999 Vigna mungo HOM05D006640 ORTHO05D008078 4.2e-25 118.6 133 47.4
COL.COLO4_07395 Corchorus olitorius HOM05D006640 ORTHO05D008078 5.5e-25 118.2 145 46.2
ATR0807G089 Amborella trichopoda HOM05D006640 ORTHO05D008078 7.2e-25 117.9 145 40.7
BraA06t27635Z Brassica rapa HOM05D006640 ORTHO05D008078 9.4e-25 117.5 146 44.5
PSO541G3394 Papaver somniferum HOM05D006640 ORTHO05D008078 9.4e-25 117.5 146 45.2
Ca_19713_v3 Cicer arietinum L. HOM05D006640 ORTHO05D008078 1.2e-24 117.1 181 38.7
CSS0036253 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 1.6e-24 116.7 134 51.5
Cpa.g.sc26.165 Carica papaya HOM05D006640 ORTHO05D008078 1.6e-24 116.7 133 48.1
AUR62028117 Chenopodium quinoa HOM05D006640 ORTHO05D008078 1.6e-24 116.7 133 49.6
Mapoly0033s0101 Marchantia polymorpha HOM05D006640 ORTHO05D008078 1.6e-24 116.7 129 45.7
Glyma.08G337600 Glycine max HOM05D003402 ORTHO05D003939 2.1e-24 116.3 133 45.9
PSO675G3428 Papaver somniferum HOM05D006640 ORTHO05D008078 2.7e-24 115.9 146 44.5
CSS0028139 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 6.1e-24 114.8 146 44.5
Sc24g0000300 Simmondsia chinensis HOM05D006640 ORTHO05D008078 8.0e-24 114.4 121 48.8
Dinv27390 Davidia involucrata HOM05D006640 ORTHO05D008078 2.3e-23 112.8 120 51.7
Nitab4.5_0010095g0020 Nicotiana tabacum HOM05D006640 ORTHO05D008078 3.0e-23 112.5 91 62.6
unitig_46.g18025 Utricularia gibba HOM05D006640 ORTHO05D008078 3.4e-22 109.0 152 40.8
Phvul.008G111000 Phaseolus vulgaris HOM05D006640 ORTHO05D008078 5.7e-22 108.2 128 46.1
Gohir.D09G047201 Gossypium hirsutum HOM05D006640 ORTHO05D008078 1.3e-21 107.1 124 46.8
Ah.13g071040 Amaranthus hybridus HOM05D006277 ORTHO05D008078 1.7e-21 106.7 206 37.4
Rhsim08G0078300 Rhododendron simsii HOM05D006640 ORTHO05D008078 1.7e-21 106.7 134 46.3
Sabra05G0196400 Salix brachista HOM05D006640 ORTHO05D008078 2.8e-21 105.9 116 50.0
AagrBONN_evm.TU.Sc2ySwM_362.2824 Anthoceros agrestis HOM05D006640 ORTHO05D008078 4.8e-21 105.1 130 41.5
Lj4C809G7 Lonicera japonica HOM05D006640 ORTHO05D008078 1.4e-20 103.6 92 53.3
Lsat_1_v5_gn_9_28760 Lactuca sativa HOM05D006640 ORTHO05D008078 2.4e-20 102.8 134 44.0
MD08G1245100 Malus domestica HOM05D006640 ORTHO05D008078 2.4e-20 102.8 109 54.1
SHI14582 Sapria himalayana HOM05D006640 ORTHO05D008078 9.1e-20 100.9 118 49.2
Sp2g08620 Schrenkiella parvula HOM05D006218 ORTHO05D007338 7.7e-19 97.8 146 37.7
RcHm_v2.0_Chr3g0481381 Rosa chinensis HOM05D006640 ORTHO05D008078 3.8e-18 95.5 107 48.6
Lsat_1_v5_gn_0_27580 Lactuca sativa HOM05D006640 ORTHO05D008078 2.5e-17 92.8 146 37.7
CSS0011114 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 2.8e-16 89.4 98 46.9
Pp3c20_21140 Physcomitrium patens HOM05D000227 ORTHO05D008078 3.6e-16 89.0 133 39.1
HPP92_007449 Vanilla planifolia HOM05D006640 ORTHO05D008078 3.6e-16 89.0 149 35.6
Peaxi162Scf00139g00094 Petunia axillaris HOM05D006640 ORTHO05D008078 8.0e-16 87.8 84 52.4
Duzib205G1379 Durio zibethinus HOM05D006640 ORTHO05D008078 1.2e-14 84.0 109 45.0
CDE04G0756 Ceratophyllum demersum HOM05D006640 ORTHO05D008078 2.4e-12 76.3 139 38.1
CBR_g30123 Chara braunii HOM05D006640 ORTHO05D008078 4.1e-12 75.5 152 32.2
Zm00001eb327920 Zea mays HOM05D006640 ORTHO05D008078 5.4e-12 75.1 107 36.4
Atru.chr3.42 Acer truncatum HOM05D006640 ORTHO05D008078 1.6e-11 73.6 69 49.3
Cfa015562 Carpinus fangiana HOM05D006640 ORTHO05D008078 1.1e-09 67.4 123 30.1
Aqoxy2G03352 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 2.8e-08 62.8 74 43.2
Aqoxy2G03351 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 9.8e-06 54.3 58 53.4


User provided reference genes

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