Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0007854 Sechium edule HOM05D008152 ORTHO05D010231 8.3e-33 142.9 62 100.0
Manes.08G056600 Manihot esculenta HOM05D008152 ORTHO05D010231 4.4e-10 67.4 57 54.4
Ciclev10006402m.g Citrus clementina HOM05D008152 ORTHO05D010231 7.5e-10 66.6 56 53.6
Duzib128G1278 Durio zibethinus HOM05D008152 ORTHO05D010231 1.3e-09 65.9 57 47.4
CSS0018961 Camellia sinensis var. sinensis HOM05D008152 ORTHO05D010231 6.4e-09 63.5 57 50.9
COL.COLO4_33936 Corchorus olitorius HOM05D008152 ORTHO05D010231 8.3e-09 63.2 58 50.0
Glyma.03G128700 Glycine max HOM05D008152 ORTHO05D010231 1.1e-08 62.8 52 53.8
RcHm_v2.0_Chr2g0124931 Rosa chinensis HOM05D008152 ORTHO05D010231 1.4e-08 62.4 56 53.6
FvH4_6g25100 Fragaria vesca HOM05D008152 ORTHO05D010231 1.9e-08 62.0 56 53.6
Oeu013028.1 Olea europaea HOM05D008152 ORTHO05D010231 1.9e-08 62.0 49 53.1
MD00G1073900 Malus domestica HOM05D008152 ORTHO05D010231 2.4e-08 61.6 59 54.2
MD12G1091200 Malus domestica HOM05D008152 ORTHO05D010231 2.4e-08 61.6 59 54.2
Medtr7g090035 Medicago truncatula HOM05D008152 ORTHO05D010231 2.4e-08 61.6 52 48.1
FAN05G4131 Fragaria x ananassa HOM05D008152 ORTHO05D010231 3.2e-08 61.2 56 51.8
Prupe.7G046400 Prunus persica HOM05D008152 ORTHO05D010231 5.4e-08 60.5 55 54.5
Lalb_Chr14g0365951 Lupinus albus HOM05D008152 ORTHO05D010231 7.1e-08 60.1 52 50.0
Nn2g14938 Nelumbo nucifera HOM05D008152 ORTHO05D010231 9.2e-08 59.7 58 50.0
CiPaw.09G044200 Carya illinoinensis HOM05D008152 ORTHO05D010231 1.2e-07 59.3 56 51.8
Lj1g0004562 Lotus japonicus HOM05D008152 ORTHO05D010231 1.2e-07 59.3 56 46.4
Potri.006G043300 Populus trichocarpa HOM05D008152 ORTHO05D010231 1.2e-07 59.3 56 48.2
PGR031G3912 Punica granatum HOM05D008152 ORTHO05D010231 1.2e-07 59.3 54 44.4
Migut.K00109 Erythranthe guttata HOM05D008152 ORTHO05D010231 2.7e-07 58.2 52 53.8
Glyma.19G131100 Glycine max HOM05D008152 ORTHO05D010231 7.8e-07 56.6 52 50.0
Nn7g36510 Nelumbo nucifera HOM05D008152 ORTHO05D010231 1.0e-06 56.2 56 50.0
GSVIVG01033573001 Vitis vinifera HOM05D008152 ORTHO05D010231 1.3e-06 55.8 57 43.9
Gohir.D09G115470 Gossypium hirsutum HOM05D008152 ORTHO05D010231 3.0e-06 54.7 60 43.3
BcaB01g05765 Brassica carinata HOM05D008152 ORTHO05D010231 3.9e-06 54.3 57 47.4
Gorai.006G133500 Gossypium raimondii HOM05D008152 ORTHO05D010231 3.9e-06 54.3 60 43.3
A10p32040 Brassica napus HOM05D008152 ORTHO05D010231 5.1e-06 53.9 58 46.6
FAN09G1661 Fragaria x ananassa HOM05D008152 ORTHO05D010231 5.1e-06 53.9 46 56.5
C09p72760 Brassica napus HOM05D008152 ORTHO05D010231 6.6e-06 53.5 58 46.6
AL6G13710 Arabidopsis lyrata HOM05D008152 ORTHO05D010231 8.6e-06 53.1 52 51.9
BcaC06g32113 Brassica carinata HOM05D008152 ORTHO05D010231 8.6e-06 53.1 57 43.9
A03p01520 Brassica napus HOM05D008152 ORTHO05D010231 8.6e-06 53.1 55 49.1
BolC9t60014H Brassica oleracea HOM05D008152 ORTHO05D010231 8.6e-06 53.1 58 46.6
BraA03t09529Z Brassica rapa HOM05D008152 ORTHO05D010231 8.6e-06 53.1 55 49.1
Nitab4.5_0010323g0030 Nicotiana tabacum HOM05D008152 ORTHO05D010231 8.6e-06 53.1 54 42.6


User provided reference genes

Program Settings