Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0007807 Sechium edule HOM05D005439 ORTHO05D006793 1.6e-62 242.7 126 100.0
ClCG11G007090 Citrullus lanatus HOM05D005439 ORTHO05D006793 1.2e-46 189.9 130 79.2
MELO3C008192.2 Cucumis melo HOM05D005439 ORTHO05D006793 6.2e-43 177.6 130 75.4
Sed0010430 Sechium edule HOM05D005439 ORTHO05D006793 1.0e-37 160.2 94 88.3
Thecc.07G077600 Theobroma cacao HOM05D005439 ORTHO05D006793 1.1e-26 123.6 121 56.2
CSS0022813 Camellia sinensis var. sinensis HOM05D005439 ORTHO05D006793 5.2e-26 121.3 122 56.6
Dinv04318 Davidia involucrata HOM05D005439 ORTHO05D006793 2.0e-25 119.4 121 54.5
Actinidia01110 Actinidia chinensis HOM05D005439 ORTHO05D006793 9.9e-25 117.1 114 58.8
Gohir.D11G168400 Gossypium hirsutum HOM05D005439 ORTHO05D006793 9.9e-25 117.1 133 54.1
Gorai.007G319700 Gossypium raimondii HOM05D005439 ORTHO05D006793 9.9e-25 117.1 133 54.1
Eucgr.I00444 Eucalyptus grandis HOM05D005439 ORTHO05D006793 1.3e-24 116.7 123 50.4
Gohir.A05G386100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.3e-24 116.7 133 54.1
Gohir.A08G188900 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.3e-24 116.7 133 54.1
Gohir.D08G040300 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.3e-24 116.7 133 54.1
Gohir.D10G173200 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.3e-24 116.7 133 54.1
Sopen07g031460 Solanum pennellii HOM05D005439 ORTHO05D006793 1.3e-24 116.7 118 55.9
PGSC0003DMG400001562 Solanum tuberosum HOM05D005439 ORTHO05D006793 1.3e-24 116.7 118 55.1
Peaxi162Scf00998g00023 Petunia axillaris HOM05D005439 ORTHO05D006793 1.7e-24 116.3 118 55.9
Nitab4.5_0003769g0120 Nicotiana tabacum HOM05D005439 ORTHO05D006793 2.2e-24 115.9 118 54.2
Gohir.D11G296600 Gossypium hirsutum HOM05D005439 ORTHO05D006793 2.9e-24 115.5 133 53.4
Gohir.D13G039100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 2.9e-24 115.5 133 54.1
Oeu037221.1 Olea europaea HOM05D005439 ORTHO05D006793 2.9e-24 115.5 117 52.1
Dinv30229 Davidia involucrata HOM05D005439 ORTHO05D006793 3.8e-24 115.2 112 58.0
Solyc07g063290.3 Solanum lycopersicum HOM05D005439 ORTHO05D006793 3.8e-24 115.2 117 56.4
Duzib170G0676 Durio zibethinus HOM05D005439 ORTHO05D006793 4.9e-24 114.8 111 58.6
CiPaw.12G120500 Carya illinoinensis HOM05D005439 ORTHO05D006793 6.4e-24 114.4 120 55.0
Gohir.A11G282786 Gossypium hirsutum HOM05D005439 ORTHO05D006793 6.4e-24 114.4 133 53.4
TAR624G0176 Trochodendron aralioides HOM05D005439 ORTHO05D006793 6.4e-24 114.4 112 58.0
vmacro08610 Vaccinium macrocarpon HOM05D005439 ORTHO05D006793 6.4e-24 114.4 112 54.5
CiPaw.08G146000 Carya illinoinensis HOM05D005439 ORTHO05D006793 1.1e-23 113.6 120 54.2
Gohir.A08G058200 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.1e-23 113.6 133 53.4
Glyma.13G278900 Glycine max HOM05D005439 ORTHO05D006793 1.4e-23 113.2 121 49.6
GSVIVG01014379001 Vitis vinifera HOM05D005439 ORTHO05D006793 1.4e-23 113.2 120 54.2
Sc18g0002800 Simmondsia chinensis HOM05D005439 ORTHO05D006793 1.9e-23 112.8 112 56.2
PGSC0003DMG400012454 Solanum tuberosum HOM05D005439 ORTHO05D006793 1.9e-23 112.8 118 53.4
Lsat_1_v5_gn_9_97181 Lactuca sativa HOM05D005439 ORTHO05D006793 2.4e-23 112.5 109 57.8
Manes.15G085800 Manihot esculenta HOM05D005439 ORTHO05D006793 2.4e-23 112.5 118 54.2
Cpa.g.sc53.123 Carica papaya HOM05D005439 ORTHO05D006793 4.2e-23 111.7 124 53.2
TPR.G16054 Trifolium pratense HOM05D005439 ORTHO05D006793 4.2e-23 111.7 119 49.6
CAN.G162.72 Capsicum annuum HOM05D005439 ORTHO05D006793 5.4e-23 111.3 119 53.8
Rhsim04G0164900 Rhododendron simsii HOM05D005439 ORTHO05D006793 5.4e-23 111.3 120 51.7
RcHm_v2.0_Chr5g0034441 Rosa chinensis HOM05D005439 ORTHO05D006793 5.4e-23 111.3 121 52.9
COL.COLO4_09427 Corchorus olitorius HOM05D005439 ORTHO05D006793 7.1e-23 110.9 106 57.5
Medtr2g079590 Medicago truncatula HOM05D005439 ORTHO05D006793 7.1e-23 110.9 118 50.0
Gohir.A11G204100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.6e-22 109.8 140 51.4
Lsat_1_v5_gn_9_97261 Lactuca sativa HOM05D005439 ORTHO05D006793 1.6e-22 109.8 114 55.3
RcHm_v2.0_Chr6g0279991 Rosa chinensis HOM05D005439 ORTHO05D006793 1.6e-22 109.8 134 49.3
ECA240G1812 Erigeron canadensis HOM05D005439 ORTHO05D006793 2.1e-22 109.4 112 52.7
TWI15G0142 Tripterygium wilfordii HOM05D005439 ORTHO05D006793 2.1e-22 109.4 126 50.0
CANSAT80G2923 Cannabis sativa HOM05D005439 ORTHO05D006793 2.7e-22 109.0 116 53.4
A02p03560 Brassica napus HOM05D005439 ORTHO05D006793 4.6e-22 108.2 117 52.1
AUR62034281 Chenopodium quinoa HOM05D005439 ORTHO05D006793 4.6e-22 108.2 117 52.1
Gorai.010G125600 Gossypium raimondii HOM05D005439 ORTHO05D006793 4.6e-22 108.2 133 52.6
MBI18_g17006_MAGBIO Magnolia biondii HOM05D005439 ORTHO05D006793 6.0e-22 107.8 115 53.0
BraA02t05327Z Brassica rapa HOM05D005439 ORTHO05D006793 7.8e-22 107.5 111 54.1
Prupe.4G185100 Prunus persica HOM05D005439 ORTHO05D006793 7.8e-22 107.5 124 51.6
Gorai.013G039600 Gossypium raimondii HOM05D005439 ORTHO05D006793 1.0e-21 107.1 133 52.6
Lalb_Chr20g0109751 Lupinus albus HOM05D005439 ORTHO05D006793 1.0e-21 107.1 119 47.1
Psat5g245080 Pisum sativum HOM05D005439 ORTHO05D006793 1.7e-21 106.3 120 47.5
Aqoxy1G02538 Aquilegia oxysepala HOM05D005439 ORTHO05D006793 2.3e-21 105.9 110 54.5
Gorai.013G217100 Gossypium raimondii HOM05D005439 ORTHO05D006793 3.0e-21 105.5 133 52.6
Lj3g0027158 Lotus japonicus HOM05D005439 ORTHO05D006793 3.0e-21 105.5 121 47.9
MD03G1224300 Malus domestica HOM05D005439 ORTHO05D006793 3.9e-21 105.1 122 52.5
TAR626G0706 Trochodendron aralioides HOM05D005439 ORTHO05D006793 3.9e-21 105.1 112 53.6
PGR031G3442 Punica granatum HOM05D005439 ORTHO05D006793 5.1e-21 104.8 118 48.3
HanXRQChr04g0095481 Helianthus annuus HOM05D005439 ORTHO05D006793 6.6e-21 104.4 120 50.0
Cc04_g05330 Coffea canephora HOM05D005439 ORTHO05D006793 1.1e-20 103.6 120 50.0
Aqoxy6G01973 Aquilegia oxysepala HOM05D005439 ORTHO05D006793 1.9e-20 102.8 119 50.4
BolC2t06755H Brassica oleracea HOM05D005439 ORTHO05D006793 1.9e-20 102.8 109 52.3
EL10Ac4g09544 Beta vulgaris HOM05D005439 ORTHO05D006793 2.5e-20 102.4 119 49.6
Gorai.012G015600 Gossypium raimondii HOM05D005439 ORTHO05D006793 2.5e-20 102.4 133 50.4
CARHR090470 Cardamine hirsuta HOM05D005439 ORTHO05D006793 3.3e-20 102.1 111 49.5
Nn1g04026 Nelumbo nucifera HOM05D005439 ORTHO05D006793 4.3e-20 101.7 132 45.5
Sabra11G0107800 Salix brachista HOM05D005439 ORTHO05D006793 4.3e-20 101.7 125 48.8
BcaB08g36849 Brassica carinata HOM05D005439 ORTHO05D006793 7.3e-20 100.9 111 52.3
Haze_09469 Corylus avellana HOM05D005439 ORTHO05D006793 7.3e-20 100.9 132 47.0
PSO675G4650 Papaver somniferum HOM05D005439 ORTHO05D006793 7.3e-20 100.9 109 55.0
DCAR_000742 Daucus carota HOM05D005439 ORTHO05D006793 9.6e-20 100.5 109 53.2
AUR62042910 Chenopodium quinoa HOM05D005439 ORTHO05D006793 1.3e-19 100.1 124 49.2
C02p08370 Brassica napus HOM05D005439 ORTHO05D006793 1.6e-19 99.8 109 51.4
Carub.0003s1515 Capsella rubella HOM05D005439 ORTHO05D006793 2.1e-19 99.4 108 52.8
Gohir.A03G006900 Gossypium hirsutum HOM05D005439 ORTHO05D006793 2.1e-19 99.4 112 55.4
Lj1g0010486 Lotus japonicus HOM05D005439 ORTHO05D006793 2.1e-19 99.4 125 46.4
Migut.H01926 Erythranthe guttata HOM05D005439 ORTHO05D006793 2.8e-19 99.0 110 49.1
Potri.011G121800 Populus trichocarpa HOM05D005439 ORTHO05D006793 2.8e-19 99.0 115 50.4
Atru.chr2.2728 Acer truncatum HOM05D005439 ORTHO05D006793 3.6e-19 98.6 112 48.2
Atru.chr2.2729 Acer truncatum HOM05D005439 ORTHO05D006793 3.6e-19 98.6 112 48.2
THA.LOC104815550 Tarenaya hassleriana HOM05D005439 ORTHO05D006793 3.6e-19 98.6 115 47.8
arahy.Tifrunner.gnm1.ann1.5K0R4Y Arachis hypogaea HOM05D005439 ORTHO05D006793 6.2e-19 97.8 149 39.6
C09p60700 Brassica napus HOM05D005439 ORTHO05D006793 2.4e-18 95.9 111 48.6
Sp6g27700 Schrenkiella parvula HOM05D005439 ORTHO05D006793 2.4e-18 95.9 111 50.5
HPP92_001754 Vanilla planifolia HOM05D005439 ORTHO05D006793 2.4e-18 95.9 123 43.1
AL3G27970 Arabidopsis lyrata HOM05D005439 ORTHO05D006793 6.9e-18 94.4 108 50.9
Thhalv10021755m.g Eutrema salsugineum HOM05D005439 ORTHO05D006793 6.9e-18 94.4 113 47.8
unitig_32.g11156 Utricularia gibba HOM05D005439 ORTHO05D006793 1.2e-17 93.6 121 43.0
AT3G15420 Arabidopsis thaliana HOM05D005439 ORTHO05D006793 2.6e-17 92.4 107 48.6
Ciclev10009838m.g Citrus clementina HOM05D005439 ORTHO05D006793 3.4e-17 92.0 97 51.5
CsaV3_2G034140 Cucumis sativus L. HOM05D003646 ORTHO05D004503 3.4e-17 92.0 55 83.6
Aa31LG8G2660 Aethionema arabicum HOM05D005439 ORTHO05D006793 9.9e-17 90.5 107 50.5
FAN14G2189 Fragaria x ananassa HOM05D005439 ORTHO05D006793 1.3e-16 90.1 108 49.1
Zm00001eb001470 Zea mays HOM05D005439 ORTHO05D006793 1.3e-16 90.1 117 47.0
Hund22944 Selenicereus undatus HOM05D005439 ORTHO05D006793 6.4e-16 87.8 114 48.2
AL2G40660 Arabidopsis lyrata HOM05D005439 ORTHO05D006793 1.1e-15 87.0 107 47.7
Zm00001eb403870 Zea mays HOM05D005439 ORTHO05D006793 1.4e-15 86.7 110 48.2
arahy.Tifrunner.gnm1.ann1.KJ06EE Arachis hypogaea HOM05D005439 ORTHO05D006793 1.9e-15 86.3 73 58.9
ATR0019G055 Amborella trichopoda HOM05D005439 ORTHO05D006793 2.4e-15 85.9 115 47.0
Carub.0002s2680 Capsella rubella HOM05D005439 ORTHO05D006793 2.4e-15 85.9 74 56.8
Nitab4.5_0010521g0020 Nicotiana tabacum HOM05D005439 ORTHO05D006793 2.4e-15 85.9 120 45.0
AT1G80745 Arabidopsis thaliana HOM05D005439 ORTHO05D006793 3.2e-15 85.5 107 45.8
Os04g0530000 Oryza sativa ssp. japonica HOM05D005439 ORTHO05D006793 3.2e-15 85.5 107 47.7
SalBow7G3564 Salvia bowleyana HOM05D005439 ORTHO05D006793 7.1e-15 84.3 117 43.6
Eucgr.L03232 Eucalyptus grandis HOM05D005439 ORTHO05D006793 2.7e-14 82.4 93 45.2
Potri.001G402700 Populus trichocarpa HOM05D005439 ORTHO05D006793 3.5e-14 82.0 71 59.2
RcHm_v2.0_Chr2g0143371 Rosa chinensis HOM05D005439 ORTHO05D006793 3.5e-14 82.0 69 62.3
Gorai.004G187000 Gossypium raimondii HOM05D005439 ORTHO05D006793 5.1e-13 78.2 74 62.2
MD11G1243100 Malus domestica HOM05D005439 ORTHO05D006793 1.5e-12 76.6 101 41.6
Gohir.D09G236700 Gossypium hirsutum HOM05D005439 ORTHO05D006793 4.3e-12 75.1 89 48.3
Mapoly0076s0011 Marchantia polymorpha HOM05D005439 ORTHO05D006793 9.6e-12 73.9 108 39.8
BcaC03g18493 Brassica carinata HOM05D005439 ORTHO05D006793 2.8e-11 72.4 84 48.8
Phvul.005G083100 Phaseolus vulgaris HOM05D005439 ORTHO05D006793 3.6e-11 72.0 116 39.7
AagrBONN_evm.TU.Sc2ySwM_369.384 Anthoceros agrestis HOM05D005439 ORTHO05D006793 2.4e-10 69.3 114 36.8
PSO541G3703 Papaver somniferum HOM05D005439 ORTHO05D006793 9.0e-10 67.4 82 47.6
Gorai.007G117500 Gossypium raimondii HOM05D005439 ORTHO05D006793 1.5e-09 66.6 89 46.1
TPR.G39010 Trifolium pratense HOM05D005439 ORTHO05D006793 2.2e-08 62.8 70 45.7
Pp3c23_5480 Physcomitrium patens HOM05D005439 ORTHO05D006793 2.9e-08 62.4 105 39.0
FAN09G1944 Fragaria x ananassa HOM05D005439 ORTHO05D006793 1.9e-07 59.7 45 66.7
AUR62029363 Chenopodium quinoa HOM05D005439 ORTHO05D006793 3.2e-07 58.9 48 56.2
QL08p019959 Quercus lobata HOM05D005439 ORTHO05D006793 4.2e-07 58.5 44 68.2
FAN02G1859 Fragaria x ananassa HOM05D005439 ORTHO05D006793 9.3e-07 57.4 45 64.4
VMungo1215G1396 Vigna mungo HOM05D005439 ORTHO05D006793 3.5e-06 55.5 78 42.3


User provided reference genes

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