Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0007780 Sechium edule HOM05D004436 ORTHO05D005179 1.1e-248 862.8 440 100.0
ClCG09G000840 Citrullus lanatus HOM05D004436 ORTHO05D005179 1.6e-186 656.4 441 77.1
MELO3C024372.2 Cucumis melo HOM05D004436 ORTHO05D005179 3.2e-179 632.1 441 73.9
CsaV3_7G034640 Cucumis sativus L. HOM05D004436 ORTHO05D005179 1.3e-177 626.7 441 73.9
Sed0020704 Sechium edule HOM05D004436 ORTHO05D005179 4.2e-163 578.6 399 76.7
CiPaw.01G221800 Carya illinoinensis HOM05D004436 ORTHO05D005179 2.1e-138 496.5 402 63.4
CiPaw.05G181900 Carya illinoinensis HOM05D004436 ORTHO05D005179 3.6e-138 495.7 402 63.4
Prupe.3G044800 Prunus persica HOM05D004436 ORTHO05D005179 5.5e-123 445.3 425 55.8
GSVIVG01016817001 Vitis vinifera HOM05D004436 ORTHO05D005179 6.8e-121 438.3 398 59.0
Manes.04G142200 Manihot esculenta HOM05D004436 ORTHO05D005179 9.1e-118 427.9 423 55.3
Haze_15997 Corylus avellana HOM05D004436 ORTHO05D005179 3.5e-117 426.0 469 51.6
RcHm_v2.0_Chr2g0144531 Rosa chinensis HOM05D004436 ORTHO05D005179 3.8e-116 422.5 412 55.6
Eucgr.F03167 Eucalyptus grandis HOM05D004436 ORTHO05D005179 5.0e-116 422.2 419 53.9
Manes.11G023100 Manihot esculenta HOM05D004436 ORTHO05D005179 6.6e-116 421.8 444 52.9
Cpa.g.sc25.86 Carica papaya HOM05D004436 ORTHO05D005179 7.2e-115 418.3 415 53.7
FAN02G3564 Fragaria x ananassa HOM05D004436 ORTHO05D005179 1.2e-114 417.5 413 54.2
FvH4_6g34180 Fragaria vesca HOM05D004436 ORTHO05D005179 1.6e-114 417.2 413 54.2
TAR375G0086 Trochodendron aralioides HOM05D004436 ORTHO05D005179 3.6e-114 416.0 412 53.9
FAN09G2135 Fragaria x ananassa HOM05D004436 ORTHO05D005179 1.4e-113 414.1 413 54.0
Dinv03512 Davidia involucrata HOM05D004436 ORTHO05D005179 1.8e-113 413.7 403 54.6
FAN05G5343 Fragaria x ananassa HOM05D004436 ORTHO05D005179 1.8e-113 413.7 413 54.0
MD09G1187900 Malus domestica HOM05D004436 ORTHO05D005179 3.0e-113 412.9 406 53.9
Ciclev10025597m.g Citrus clementina HOM05D004436 ORTHO05D005179 8.9e-113 411.4 405 54.8
Thecc.03G227200 Theobroma cacao HOM05D004436 ORTHO05D005179 2.0e-112 410.2 438 51.8
PGR119G1065 Punica granatum HOM05D004436 ORTHO05D005179 1.4e-110 404.1 411 54.0
TWI23G0436 Tripterygium wilfordii HOM05D004436 ORTHO05D005179 2.4e-110 403.3 443 51.2
Sc12g0010440 Simmondsia chinensis HOM05D004436 ORTHO05D005179 5.4e-110 402.1 418 52.2
FAN26G0630 Fragaria x ananassa HOM05D004436 ORTHO05D005179 7.0e-110 401.7 427 52.0
Potri.001G198600 Populus trichocarpa HOM05D004436 ORTHO05D005179 7.0e-110 401.7 435 49.2
Sopen06g018390 Solanum pennellii HOM05D004436 ORTHO05D005179 1.6e-109 400.6 434 51.2
Actinidia32167 Actinidia chinensis HOM05D004436 ORTHO05D005179 3.5e-109 399.4 408 53.2
Lj5A40G74 Lonicera japonica HOM05D004436 ORTHO05D005179 4.5e-109 399.1 403 52.1
Duzib205G0267 Durio zibethinus HOM05D004436 ORTHO05D005179 1.7e-108 397.1 434 51.8
FAN14G2695 Fragaria x ananassa HOM05D004436 ORTHO05D005179 1.7e-108 397.1 449 49.9
COL.COLO4_30482 Corchorus olitorius HOM05D004436 ORTHO05D005179 3.9e-108 396.0 425 53.2
Solyc06g053330.4 Solanum lycopersicum HOM05D004436 ORTHO05D005179 3.9e-108 396.0 434 51.2
PGSC0003DMG400016304 Solanum tuberosum HOM05D004436 ORTHO05D005179 5.0e-108 395.6 443 49.9
RcHm_v2.0_Chr2g0166351 Rosa chinensis HOM05D004436 ORTHO05D005179 8.6e-108 394.8 397 54.7
CSS0015890 Camellia sinensis var. sinensis HOM05D004436 ORTHO05D005179 2.5e-107 393.3 398 53.3
Glyma.15G165300 Glycine max HOM05D004436 ORTHO05D005179 4.3e-107 392.5 394 53.6
Oeu044709.1 Olea europaea HOM05D004436 ORTHO05D005179 1.6e-106 390.6 408 51.2
CANSAT56G1493 Cannabis sativa HOM05D004436 ORTHO05D005179 2.8e-106 389.8 399 54.1
Lj6g0016044 Lotus japonicus HOM05D004436 ORTHO05D005179 2.8e-106 389.8 442 48.2
Ca_02096_v3 Cicer arietinum L. HOM05D004436 ORTHO05D005179 8.0e-106 388.3 401 52.4
Nitab4.5_0000035g0090 Nicotiana tabacum HOM05D004436 ORTHO05D005179 1.4e-105 387.5 440 49.3
Dinv30366 Davidia involucrata HOM05D004436 ORTHO05D005179 2.3e-105 386.7 358 56.4
Lalb_Chr08g0233321 Lupinus albus HOM05D004436 ORTHO05D005179 4.0e-105 386.0 435 49.2
Peaxi162Scf00943g00014 Petunia axillaris HOM05D004436 ORTHO05D005179 6.8e-105 385.2 426 50.2
Rhsim08G0236100 Rhododendron simsii HOM05D004436 ORTHO05D005179 1.2e-104 384.4 400 51.5
Aa31LG8G1130 Aethionema arabicum HOM05D004436 ORTHO05D005179 2.0e-104 383.6 411 49.4
CAN.G540.4 Capsicum annuum HOM05D004436 ORTHO05D005179 2.6e-104 383.3 398 51.0
MSTRG.22562 Avicennia marina HOM05D004436 ORTHO05D005179 3.4e-104 382.9 415 50.8
Oeu047041.1 Olea europaea HOM05D004436 ORTHO05D005179 7.5e-104 381.7 392 52.3
Sabra01G0155800 Salix brachista HOM05D004436 ORTHO05D005179 1.7e-103 380.6 443 47.9
vmacro22224 Vaccinium macrocarpon HOM05D004436 ORTHO05D005179 2.2e-103 380.2 402 51.7
FvH4_6g47280 Fragaria vesca HOM05D004436 ORTHO05D005179 3.7e-103 379.4 426 49.8
Hma1.2p1_0496F.1_g166100 Hydrangea macrophylla HOM05D004436 ORTHO05D005179 5.4e-102 375.6 411 49.9
Peaxi162Scf00647g00219 Petunia axillaris HOM05D004436 ORTHO05D005179 7.0e-102 375.2 401 50.1
TPR.G13789 Trifolium pratense HOM05D004436 ORTHO05D005179 7.0e-102 375.2 399 49.9
CSS0033207 Camellia sinensis var. sinensis HOM05D004436 ORTHO05D005179 2.0e-101 373.6 398 51.8
QL05p009436 Quercus lobata HOM05D004436 ORTHO05D005179 1.7e-100 370.5 639 37.9
THA.LOC104804933 Tarenaya hassleriana HOM05D004436 ORTHO05D005179 2.3e-100 370.2 405 49.4
Nitab4.5_0012713g0010 Nicotiana tabacum HOM05D004436 ORTHO05D005179 3.0e-100 369.8 402 50.7
Hund20819 Selenicereus undatus HOM05D004436 ORTHO05D005179 3.0e-100 369.8 412 50.2
arahy.Tifrunner.gnm1.ann1.4RDH3B Arachis hypogaea HOM05D004436 ORTHO05D005179 7.3e-99 365.2 403 49.1
Gohir.D03G171700 Gossypium hirsutum HOM05D004436 ORTHO05D005179 7.3e-99 365.2 436 48.6
Medtr7g104810 Medicago truncatula HOM05D004436 ORTHO05D005179 7.3e-99 365.2 403 49.6
Gohir.A03G000500 Gossypium hirsutum HOM05D004436 ORTHO05D005179 9.5e-99 364.8 436 48.4
Medtr2g037880 Medicago truncatula HOM05D004436 ORTHO05D005179 1.6e-98 364.0 429 48.7
arahy.Tifrunner.gnm1.ann1.0TY6IG Arachis hypogaea HOM05D004436 ORTHO05D005179 2.1e-98 363.6 403 48.6
Gorai.003G182300 Gossypium raimondii HOM05D004436 ORTHO05D005179 2.8e-98 363.2 436 48.2
Atru.chr1.3808 Acer truncatum HOM05D004436 ORTHO05D005179 3.6e-98 362.8 392 51.5
DCAR_026403 Daucus carota HOM05D004436 ORTHO05D005179 6.8e-97 358.6 402 47.8
COL.COLO4_17027 Corchorus olitorius HOM05D004436 ORTHO05D005179 3.4e-96 356.3 353 54.1
Lsat_1_v5_gn_5_135221 Lactuca sativa HOM05D004436 ORTHO05D005179 3.4e-96 356.3 435 45.5
Phvul.009G236700 Phaseolus vulgaris HOM05D004436 ORTHO05D005179 4.4e-96 355.9 396 49.0
Thhalv10020760m.g Eutrema salsugineum HOM05D004436 ORTHO05D005179 2.4e-94 350.1 403 45.9
HanXRQChr10g0312341 Helianthus annuus HOM05D004436 ORTHO05D005179 4.1e-94 349.4 402 49.0
Sp3g12180 Schrenkiella parvula HOM05D004436 ORTHO05D005179 5.4e-94 349.0 446 42.4
Migut.D00948 Erythranthe guttata HOM05D004436 ORTHO05D005179 7.1e-94 348.6 439 46.0
Medtr2g037460 Medicago truncatula HOM05D004436 ORTHO05D005179 2.1e-93 347.1 424 47.2
Psat1g144000 Pisum sativum HOM05D004436 ORTHO05D005179 2.1e-93 347.1 427 45.7
Cc04_g01610 Coffea canephora HOM05D004436 ORTHO05D005179 1.1e-91 341.3 317 55.2
SGA_v2.0_scaffold68G22895 Striga asiatica HOM05D004436 ORTHO05D005179 1.5e-91 340.9 398 48.5
AT3G13940 Arabidopsis thaliana HOM05D004436 ORTHO05D005179 2.5e-91 340.1 443 42.7
Carub.0003s1351 Capsella rubella HOM05D004436 ORTHO05D005179 3.3e-91 339.7 433 42.5
AL3G26120 Arabidopsis lyrata HOM05D004436 ORTHO05D005179 1.4e-89 334.3 443 41.5
ECA234G4408 Erigeron canadensis HOM05D004436 ORTHO05D005179 4.0e-89 332.8 417 46.8
Rhsim10G0150900 Rhododendron simsii HOM05D004436 ORTHO05D005179 1.3e-87 327.8 490 41.6
CARHR088750 Cardamine hirsuta HOM05D004436 ORTHO05D005179 1.7e-87 327.4 424 44.3
Aqoxy2G00706 Aquilegia oxysepala HOM05D004436 ORTHO05D005179 3.2e-86 323.2 404 45.0
CDE07G0038 Ceratophyllum demersum HOM05D004436 ORTHO05D005179 4.1e-86 322.8 427 43.6
PSO135G0558 Papaver somniferum HOM05D004436 ORTHO05D005179 5.4e-86 322.4 408 44.9
EL10Ac7g16380 Beta vulgaris HOM05D004436 ORTHO05D005179 7.1e-86 322.0 411 44.0
PSO724G1089 Papaver somniferum HOM05D004436 ORTHO05D005179 1.2e-85 321.2 408 45.3
AUR62009860 Chenopodium quinoa HOM05D004436 ORTHO05D005179 2.7e-85 320.1 415 43.4
MD17G1172300 Malus domestica HOM05D004436 ORTHO05D005179 2.7e-85 320.1 313 54.0
EL10Ac7g16378 Beta vulgaris HOM05D004436 ORTHO05D005179 6.0e-85 318.9 411 44.5
BraA01t04010Z Brassica rapa HOM05D004436 ORTHO05D005179 7.8e-85 318.5 401 44.1
A01p39710 Brassica napus HOM05D004436 ORTHO05D005179 1.3e-84 317.8 401 44.1
BcaC09g48383 Brassica carinata HOM05D004436 ORTHO05D005179 6.6e-84 315.5 401 43.6
C01p50660 Brassica napus HOM05D004436 ORTHO05D005179 6.6e-84 315.5 401 43.6
BolC1t05015H Brassica oleracea HOM05D004436 ORTHO05D005179 6.6e-84 315.5 401 43.6
BcaB04g20967 Brassica carinata HOM05D004436 ORTHO05D005179 1.5e-83 314.3 407 43.0
Ah.07g197300 Amaranthus hybridus HOM05D004436 ORTHO05D005179 4.7e-82 309.3 426 44.4
Actinidia21779 Actinidia chinensis HOM05D004436 ORTHO05D005179 2.0e-80 303.9 404 44.3
AUR62001510 Chenopodium quinoa HOM05D004436 ORTHO05D005179 7.6e-80 302.0 445 40.2
FAN24G2018 Fragaria x ananassa HOM05D004436 ORTHO05D005179 2.4e-78 297.0 389 45.5
Peaxi162Scf00060g02815 Petunia axillaris HOM05D004436 ORTHO05D005179 9.3e-78 295.0 413 42.4
Nn6g35749 Nelumbo nucifera HOM05D004436 ORTHO05D005179 2.1e-74 283.9 411 41.4
unitig_26.g9010 Utricularia gibba HOM05D000572 ORTHO05D002399 3.6e-74 283.1 407 43.5
FvH4_2g14600 Fragaria vesca HOM05D004436 ORTHO05D005179 9.9e-72 275.0 298 51.0
Nitab4.5_0004287g0020 Nicotiana tabacum HOM05D004436 ORTHO05D005179 4.2e-70 269.6 402 41.8
Ca_27339_v3 Cicer arietinum L. HOM05D004436 ORTHO05D005179 1.0e-68 265.0 293 51.5
ATR0762G049 Amborella trichopoda HOM05D004436 ORTHO05D005179 1.2e-64 251.5 450 37.8
HPP92_009424 Vanilla planifolia HOM05D004436 ORTHO05D005179 3.5e-61 240.0 426 37.6
Lj6g0018808 Lotus japonicus HOM05D004436 ORTHO05D005179 5.6e-59 232.6 244 50.4
TPR.G16505 Trifolium pratense HOM05D004436 ORTHO05D005179 3.8e-55 219.9 216 51.9
THA.LOC104822769 Tarenaya hassleriana HOM05D004436 ORTHO05D005179 7.1e-54 215.7 241 47.3
Carub.0003s3547 Capsella rubella HOM05D004436 ORTHO05D005179 4.6e-53 213.0 374 36.4
Zm00001eb166800 Zea mays HOM05D004436 ORTHO05D005179 5.7e-51 206.1 396 35.1
FAN27G1625 Fragaria x ananassa HOM05D004436 ORTHO05D005179 1.0e-47 195.3 384 35.9
Os11g0615100 Oryza sativa ssp. japonica HOM05D004436 ORTHO05D005179 1.7e-47 194.5 425 34.6
FAN14G5104 Fragaria x ananassa HOM05D002326 ORTHO05D005179 8.4e-47 192.2 228 44.7
Ah.08g216510 Amaranthus hybridus HOM05D004436 ORTHO05D005179 2.1e-45 187.6 314 38.9
AagrBONN_evm.TU.Sc2ySwM_368.2707 Anthoceros agrestis HOM05D004436 ORTHO05D005179 4.6e-45 186.4 473 31.9
SEGI_28110 Sequoiadendron giganteum HOM05D004436 ORTHO05D005179 6.3e-42 176.0 319 37.6
DCAR_023423 Daucus carota HOM05D004436 ORTHO05D005179 5.3e-41 172.9 239 43.9
SEGI_22335 Sequoiadendron giganteum HOM05D004436 ORTHO05D005179 5.3e-41 172.9 323 37.8
Pp3c8_24340 Physcomitrium patens HOM05D004436 ORTHO05D005179 3.4e-40 170.2 444 29.7
FAN09G3702 Fragaria x ananassa HOM05D002326 ORTHO05D005179 5.0e-39 166.4 421 33.3
FAN02G4131 Fragaria x ananassa HOM05D002326 ORTHO05D005179 3.2e-38 163.7 421 32.8
FAN15G1241 Fragaria x ananassa HOM05D004436 ORTHO05D005179 3.3e-35 153.7 403 31.0
Aqoxy7G00272 Aquilegia oxysepala HOM05D004436 ORTHO05D005179 3.1e-33 147.1 218 39.0
Aqoxy2G02914 Aquilegia oxysepala HOM05D004436 ORTHO05D005179 3.8e-31 140.2 138 52.9
FAN20G3048 Fragaria x ananassa HOM05D004436 ORTHO05D005179 1.9e-30 137.9 240 35.8
Haze_06394 Corylus avellana HOM05D004436 ORTHO05D005179 7.2e-30 136.0 340 32.6
Oeu004353.1 Olea europaea HOM05D004436 ORTHO05D005179 9.7e-27 125.6 110 56.4
Mapoly0063s0055 Marchantia polymorpha HOM05D004436 ORTHO05D005179 4.5e-24 116.7 334 28.4
THA.LOC104822775 Tarenaya hassleriana HOM05D004436 ORTHO05D005179 7.2e-22 109.4 153 41.2
TPR.G16496 Trifolium pratense HOM05D004436 ORTHO05D005179 1.6e-21 108.2 181 37.6
ATR0185G001 Amborella trichopoda HOM05D004436 ORTHO05D005179 4.7e-21 106.7 171 39.2
AUR62000997 Chenopodium quinoa HOM05D004436 ORTHO05D005179 6.1e-21 106.3 133 45.9
AL1G64440 Arabidopsis lyrata HOM05D004436 ORTHO05D005179 4.4e-19 100.1 153 36.6
Dinv21190 Davidia involucrata HOM05D004436 ORTHO05D005179 5.7e-19 99.8 108 47.2
PGSC0003DMG400002436 Solanum tuberosum HOM05D004436 ORTHO05D005179 1.1e-17 95.5 115 48.7
Aqoxy2G02915 Aquilegia oxysepala HOM05D004436 ORTHO05D005179 1.2e-16 92.0 144 38.9
CBR_g45967 Chara braunii HOM05D004436 ORTHO05D005179 1.7e-15 88.2 453 22.3
Peaxi162Scf01131g00007 Petunia axillaris HOM05D004436 ORTHO05D005179 6.8e-12 76.3 131 35.1
Psat6g077080 Pisum sativum HOM05D001891 ORTHO05D005832 3.4e-11 73.9 116 40.5
Psat6g077120 Pisum sativum HOM05D001891 ORTHO05D005832 3.4e-11 73.9 116 40.5
PSO017G0055 Papaver somniferum HOM05D004436 ORTHO05D005179 1.1e-09 68.9 139 34.5
Oeu027301.1 Olea europaea HOM05D004436 ORTHO05D005179 1.8e-09 68.2 138 38.4
SMO144G0124 Selaginella moellendorffii HOM05D004436 ORTHO05D005179 3.1e-09 67.4 106 37.7
SEGI_36774 Sequoiadendron giganteum HOM05D004436 ORTHO05D005179 3.1e-09 67.4 147 29.9
Ca_02098_v3 Cicer arietinum L. HOM05D000001 ORTHO05D000003 4.5e-08 63.5 129 34.9
ATR0589G117 Amborella trichopoda HOM05D004436 ORTHO05D005179 2.9e-07 60.8 80 45.0
FAN14G1374 Fragaria x ananassa HOM05D004436 ORTHO05D005179 3.8e-07 60.5 178 30.3
Cre01.g070567 Chlamydomonas reinhardtii HOM05D004436 ORTHO05D005179 4.2e-06 57.0 231 26.8


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