Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0007762 Sechium edule HOM05D011305 ORTHO05D000952 3.8e-133 478.4 285 100.0
Sed0013408 Sechium edule HOM05D011305 ORTHO05D000952 1.6e-115 419.9 286 91.6
Sed0003660 Sechium edule HOM05D011305 ORTHO05D000952 7.1e-87 324.7 183 86.3
Sed0016647 Sechium edule HOM05D011305 ORTHO05D000952 8.6e-85 317.8 149 99.3
Sed0011377 Sechium edule HOM05D011305 ORTHO05D000952 1.7e-80 303.5 252 65.1
Sed0002192 Sechium edule HOM05D011305 ORTHO05D000952 1.2e-73 280.8 287 67.6
ClCG06G017370 Citrullus lanatus HOM05D011305 ORTHO05D000952 3.2e-47 193.0 148 61.5
Sed0020793 Sechium edule HOM05D011305 ORTHO05D000952 7.4e-44 181.8 136 62.5
MELO3C009236.2 Cucumis melo HOM05D011305 ORTHO05D000952 1.1e-42 177.9 147 59.2
Sed0014009 Sechium edule HOM05D011305 ORTHO05D000952 5.0e-40 169.1 133 58.6
CsaV3_1G031860 Cucumis sativus L. HOM05D004945 ORTHO05D005536 1.1e-39 167.9 145 55.2
CsaV3_1G009440 Cucumis sativus L. HOM05D011305 ORTHO05D000952 3.2e-39 166.4 145 55.2
CsaV3_1G027970 Cucumis sativus L. HOM05D011305 ORTHO05D000952 3.6e-38 162.9 147 54.4
CsaV3_3G034660 Cucumis sativus L. HOM05D011305 ORTHO05D000952 3.6e-38 162.9 145 55.2
MELO3C026251.2 Cucumis melo HOM05D011305 ORTHO05D000952 3.9e-37 159.5 126 57.9
CsaV3_7G001030 Cucumis sativus L. HOM05D011305 ORTHO05D000952 1.1e-31 141.4 129 54.3
Prupe.4G246100 Prunus persica HOM05D002630 ORTHO05D000952 2.9e-16 90.1 127 42.5
Prupe.I005300 Prunus persica HOM05D002630 ORTHO05D000952 6.5e-16 89.0 127 42.5
ClCG07G002360 Citrullus lanatus HOM05D002630 ORTHO05D000952 8.5e-16 88.6 123 41.5
ClCG07G002020 Citrullus lanatus HOM05D002630 ORTHO05D000952 1.5e-15 87.8 123 40.7
Ciclev10033541m.g Citrus clementina HOM05D002630 ORTHO05D000952 2.5e-15 87.0 144 41.0
Ciclev10033719m.g Citrus clementina HOM05D002630 ORTHO05D000952 5.5e-15 85.9 144 41.0
Ciclev10033957m.g Citrus clementina HOM05D002630 ORTHO05D000952 7.2e-15 85.5 144 40.3
Ciclev10033346m.g Citrus clementina HOM05D002630 ORTHO05D000952 9.4e-15 85.1 144 40.3
MELO3C027409.2 Cucumis melo HOM05D002630 ORTHO05D000952 9.4e-15 85.1 123 39.8
CsaV3_4G025380 Cucumis sativus L. HOM05D002630 ORTHO05D000952 9.4e-15 85.1 123 39.8
Ciclev10033536m.g Citrus clementina HOM05D002630 ORTHO05D000952 2.1e-14 84.0 144 39.6
Ciclev10033436m.g Citrus clementina HOM05D002630 ORTHO05D000952 4.7e-14 82.8 144 39.6
Ciclev10033459m.g Citrus clementina HOM05D002630 ORTHO05D000952 4.7e-14 82.8 144 39.6
CsaV3_1G044320 Cucumis sativus L. HOM05D002630 ORTHO05D000952 4.7e-14 82.8 123 37.4
Prupe.4G230600 Prunus persica HOM05D002630 ORTHO05D000952 4.7e-14 82.8 132 40.2
Sed0024693 Sechium edule HOM05D002630 ORTHO05D000952 4.7e-14 82.8 124 37.9
MELO3C009980.2 Cucumis melo HOM05D002630 ORTHO05D000952 6.1e-14 82.4 124 39.5
Ciclev10033526m.g Citrus clementina HOM05D002630 ORTHO05D000952 1.0e-13 81.6 144 39.6
Sed0020443 Sechium edule HOM05D002630 ORTHO05D000952 2.8e-11 73.6 125 37.6
MELO3C030697.2 Cucumis melo HOM05D002630 ORTHO05D000952 3.7e-11 73.2 132 34.8
MD03G1255100 Malus domestica HOM05D002630 ORTHO05D000952 8.3e-11 72.0 116 36.2
MD00G1154700 Malus domestica HOM05D002630 ORTHO05D000952 1.1e-10 71.6 116 37.1
MD00G1154800 Malus domestica HOM05D002630 ORTHO05D000952 1.1e-10 71.6 116 37.1
MD03G1255000 Malus domestica HOM05D002630 ORTHO05D000952 1.1e-10 71.6 116 38.8
MD03G1255200 Malus domestica HOM05D002630 ORTHO05D000952 1.1e-10 71.6 116 37.1
MD03G1255300 Malus domestica HOM05D002630 ORTHO05D000952 1.1e-10 71.6 116 37.1
MD00G1155000 Malus domestica HOM05D002630 ORTHO05D000952 3.1e-10 70.1 116 35.3
Lalb_Chr06g0171691 Lupinus albus HOM05D002630 ORTHO05D000952 4.1e-10 69.7 107 37.4
RcHm_v2.0_Chr7g0230611 Rosa chinensis HOM05D010397 ORTHO05D000952 7.0e-10 68.9 144 38.2
FAN21G1107 Fragaria x ananassa HOM05D002630 ORTHO05D000952 9.1e-10 68.6 133 33.1
Ciclev10033744m.g Citrus clementina HOM05D002630 ORTHO05D000952 1.2e-09 68.2 105 42.9
Manes.05G091800 Manihot esculenta HOM05D002630 ORTHO05D000952 1.6e-09 67.8 117 36.8
Lj5g0010861 Lotus japonicus HOM05D002630 ORTHO05D000952 2.7e-09 67.0 127 34.6
FAN21G0085 Fragaria x ananassa HOM05D002630 ORTHO05D000952 3.5e-09 66.6 133 32.3
RcHm_v2.0_Chr7g0236441 Rosa chinensis HOM05D010397 ORTHO05D000952 3.5e-09 66.6 143 37.1
RcHm_v2.0_Chr7g0236511 Rosa chinensis HOM05D010397 ORTHO05D000952 3.5e-09 66.6 143 37.1
FvH4_5g31090 Fragaria vesca HOM05D008426 ORTHO05D016292 2.2e-08 63.9 134 31.3
QL12p024328 Quercus lobata HOM05D002630 ORTHO05D000952 5.0e-08 62.8 154 27.3
FAN16G2543 Fragaria x ananassa HOM05D002630 ORTHO05D000952 6.5e-08 62.4 139 30.9
RcHm_v2.0_Chr7g0231191 Rosa chinensis HOM05D002630 ORTHO05D000952 8.5e-08 62.0 168 29.2
MD06G1030300 Malus domestica HOM05D002630 ORTHO05D000952 1.1e-07 61.6 120 34.2
Eucgr.E00541 Eucalyptus grandis HOM05D009365 ORTHO05D000952 1.5e-07 61.2 113 35.4
Eucgr.E00542 Eucalyptus grandis HOM05D009365 ORTHO05D000952 1.5e-07 61.2 113 35.4
FAN21G2732 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.9e-07 60.8 129 32.6
FAN25G2554 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.9e-07 60.8 129 32.6
FvH4_3g25560 Fragaria vesca HOM05D002630 ORTHO05D000952 3.2e-07 60.1 129 31.8
FAN02G3776 Fragaria x ananassa HOM05D008426 ORTHO05D000952 3.2e-07 60.1 121 32.2
FvH4_6g51360 Fragaria vesca HOM05D008426 ORTHO05D000952 4.7e-06 56.2 121 32.2
FAN05G2840 Fragaria x ananassa HOM05D003655 ORTHO05D004065 4.7e-06 56.2 121 32.2
FAN14G4734 Fragaria x ananassa HOM05D008426 ORTHO05D000952 4.7e-06 56.2 121 32.2


User provided reference genes

Program Settings