Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0007759 Sechium edule HOM05D008339 ORTHO05D009712 2.3e-84 315.5 156 100.0
Sed0011112 Sechium edule HOM05D008339 ORTHO05D009712 4.2e-57 224.9 156 74.4
ClCG02G014760 Citrullus lanatus HOM05D008339 ORTHO05D009712 1.6e-56 223.0 155 69.0
MELO3C031525.2 Cucumis melo HOM05D008339 ORTHO05D009712 4.3e-54 214.9 153 69.9
MELO3C004166.2 Cucumis melo HOM05D008339 ORTHO05D009712 5.5e-49 198.0 154 64.3
MELO3C004156.2 Cucumis melo HOM05D008339 ORTHO05D009712 1.2e-48 196.8 154 63.6
MELO3C004168.2 Cucumis melo HOM05D008339 ORTHO05D009712 5.1e-47 191.4 154 61.7
CsaV3_2G007240 Cucumis sativus L. HOM05D008339 ORTHO05D007109 5.8e-43 177.9 153 58.8
MELO3C031307.2 Cucumis melo HOM05D008339 ORTHO05D009712 3.2e-41 172.2 140 61.4
MELO3C031306.2 Cucumis melo HOM05D008339 ORTHO05D009712 3.0e-39 165.6 139 60.4
MELO3C004157.2 Cucumis melo HOM05D008339 ORTHO05D009712 2.2e-37 159.5 140 59.3
Potri.005G007100 Populus trichocarpa HOM05D008339 ORTHO05D009712 2.2e-37 159.5 150 50.7
ClCG02G014750 Citrullus lanatus HOM05D008339 ORTHO05D013640 1.8e-36 156.4 156 49.4
Sabra05G0018000 Salix brachista HOM05D008339 ORTHO05D009712 1.2e-35 153.7 150 49.3
Prupe.6G309300 Prunus persica HOM05D008339 ORTHO05D009712 2.2e-34 149.4 146 49.3
Cfa012848 Carpinus fangiana HOM05D008339 ORTHO05D009712 5.0e-34 148.3 155 48.4
MD12G1203300 Malus domestica HOM05D008339 ORTHO05D009712 5.0e-34 148.3 146 49.3
Prupe.6G309200 Prunus persica HOM05D008339 ORTHO05D009712 1.4e-33 146.7 147 51.0
Sabra13G0004800 Salix brachista HOM05D008339 ORTHO05D009712 5.5e-33 144.8 149 48.3
Sabra05G0006500 Salix brachista HOM05D008339 ORTHO05D009712 3.6e-32 142.1 138 50.0
MD12G1203400 Malus domestica HOM05D008339 ORTHO05D009712 2.3e-31 139.4 147 48.3
Thecc.05G309700 Theobroma cacao HOM05D008339 ORTHO05D009712 3.0e-31 139.0 152 46.7
Haze_08675 Corylus avellana HOM05D008339 ORTHO05D009712 1.1e-30 137.1 144 47.9
MELO3C031308.2 Cucumis melo HOM05D008339 ORTHO05D009712 2.5e-30 136.0 122 53.3
Cpa.g.sc48.196 Carica papaya HOM05D008339 ORTHO05D009712 1.7e-29 133.3 152 47.4
MELO3C031309.2 Cucumis melo HOM05D008339 ORTHO05D009712 2.2e-29 132.9 94 69.1
MELO3C031523.2 Cucumis melo HOM05D008339 ORTHO05D009712 2.8e-29 132.5 97 68.0
Gorai.007G298200 Gossypium raimondii HOM05D008339 ORTHO05D009712 3.7e-29 132.1 126 52.4
PGR004G1038 Punica granatum HOM05D008339 ORTHO05D009712 3.7e-29 132.1 148 45.3
PGR031G2810 Punica granatum HOM05D008339 ORTHO05D009712 8.2e-29 131.0 141 48.2
CANSAT54G0094 Cannabis sativa HOM05D008339 ORTHO05D009712 3.1e-28 129.0 145 46.2
Gohir.D11G276100 Gossypium hirsutum HOM05D008339 ORTHO05D009712 4.1e-28 128.6 129 49.6
TWI12G1182 Tripterygium wilfordii HOM05D008339 ORTHO05D009712 5.3e-28 128.3 155 43.2
CANSAT54G1683 Cannabis sativa HOM05D008339 ORTHO05D009712 1.2e-27 127.1 145 46.2
PGR031G3971 Punica granatum HOM05D008339 ORTHO05D009712 1.2e-27 127.1 151 44.4
MD12G1203500 Malus domestica HOM05D008339 ORTHO05D009712 1.0e-26 124.0 145 42.8
PGR031G0599 Punica granatum HOM05D008339 ORTHO05D009712 1.0e-26 124.0 155 42.6
AUR62000433 Chenopodium quinoa HOM05D000060 ORTHO05D004147 2.9e-26 122.5 150 42.0
RcHm_v2.0_Chr3g0457691 Rosa chinensis HOM05D008339 ORTHO05D009712 2.9e-26 122.5 150 40.7
Rhsim11G0099000 Rhododendron simsii HOM05D008339 ORTHO05D009712 1.9e-25 119.8 152 38.8
FvH4_6g08020 Fragaria vesca HOM05D008339 ORTHO05D009712 7.2e-25 117.9 146 43.8
FAN14G1454 Fragaria x ananassa HOM05D008339 ORTHO05D009712 7.2e-25 117.9 146 43.8
FvH4_6g07980 Fragaria vesca HOM05D008339 ORTHO05D009712 2.1e-24 116.3 144 39.6
FAN14G5780 Fragaria x ananassa HOM05D008339 ORTHO05D009712 2.1e-24 116.3 144 39.6
FAN02G4119 Fragaria x ananassa HOM05D008339 ORTHO05D009712 2.7e-24 115.9 146 43.2
FAN05G1492 Fragaria x ananassa HOM05D008339 ORTHO05D009712 3.6e-24 115.5 146 42.5
Ciclev10013648m.g Citrus clementina HOM05D008339 ORTHO05D009712 8.8e-23 110.9 159 37.1
Ah.06g196240 Amaranthus hybridus HOM05D008339 ORTHO05D009712 1.1e-22 110.5 150 40.0
MELO3C004164.2 Cucumis melo HOM05D008339 ORTHO05D009712 2.0e-22 109.8 150 41.3
Prupe.1G205300 Prunus persica HOM05D008339 ORTHO05D009712 5.3e-20 101.7 146 40.4
Sabra11G0113000 Salix brachista HOM05D008339 ORTHO05D009712 1.2e-19 100.5 96 50.0
Oeu043379.1 Olea europaea HOM05D009933 ORTHO05D012084 1.1e-17 94.0 154 32.5
PGR031G3403 Punica granatum HOM05D008339 ORTHO05D009712 7.2e-17 91.3 141 36.9
Oeu043429.1 Olea europaea HOM05D009933 ORTHO05D012084 9.4e-17 90.9 154 32.5
Sed0015156 Sechium edule HOM05D011459 ORTHO05D013640 9.4e-17 90.9 128 40.6
TAR362G0027 Trochodendron aralioides HOM05D008339 ORTHO05D009712 4.7e-16 88.6 144 30.6
CARHR178500 Cardamine hirsuta HOM05D013394 ORTHO05D009712 8.0e-16 87.8 152 32.2
AL1G19880 Arabidopsis lyrata HOM05D009911 ORTHO05D009712 2.3e-15 86.3 155 31.0
BraA06t23824Z Brassica rapa HOM05D009911 ORTHO05D009712 5.2e-15 85.1 156 31.4
AT1G09370 Arabidopsis thaliana HOM05D009911 ORTHO05D009712 8.8e-15 84.3 155 30.3
A06p06110 Brassica napus HOM05D009911 ORTHO05D009712 8.8e-15 84.3 156 30.8
Thhalv10009653m.g Eutrema salsugineum HOM05D009911 ORTHO05D009712 3.3e-14 82.4 155 31.6
SalBow7G3223 Salvia bowleyana HOM05D009933 ORTHO05D012084 4.4e-14 82.0 154 30.5
Haze_04054 Corylus avellana HOM05D008339 ORTHO05D009712 7.4e-14 81.3 149 32.2
FAN05G4801 Fragaria x ananassa HOM05D008339 ORTHO05D009712 7.4e-14 81.3 85 43.5
C05p07380 Brassica napus HOM05D009911 ORTHO05D009712 9.7e-14 80.9 155 29.0
Migut.G00780 Erythranthe guttata HOM05D009933 ORTHO05D012084 9.7e-14 80.9 150 32.0
SalBow7G3334 Salvia bowleyana HOM05D000059 ORTHO05D012084 9.7e-14 80.9 154 29.9
CARHR178520 Cardamine hirsuta HOM05D013394 ORTHO05D009712 1.3e-13 80.5 152 30.3
Eucgr.E00366 Eucalyptus grandis HOM05D008339 ORTHO05D009712 8.2e-13 77.8 149 29.5
MBI18_g04557_MAGBIO Magnolia biondii HOM05D008403 ORTHO05D010317 8.2e-13 77.8 155 28.4
AT1G09360 Arabidopsis thaliana HOM05D013394 ORTHO05D009712 5.3e-12 75.1 152 30.3
Sed0004364 Sechium edule HOM05D011459 ORTHO05D013640 5.3e-12 75.1 146 32.2
TAR627G0716 Trochodendron aralioides HOM05D008403 ORTHO05D010317 5.3e-12 75.1 146 32.2
Carub.0001s0871 Capsella rubella HOM05D009911 ORTHO05D009712 7.0e-12 74.7 152 28.3
SGA_v2.0_scaffold74G24613 Striga asiatica HOM05D009933 ORTHO05D012084 7.0e-12 74.7 153 32.0
THA.LOC104816853 Tarenaya hassleriana HOM05D009911 ORTHO05D009712 1.6e-11 73.6 144 27.1
FAN02G0526 Fragaria x ananassa HOM05D000010 ORTHO05D004316 1.7e-10 70.1 73 46.6
TAR362G0352 Trochodendron aralioides HOM05D008191 ORTHO05D010044 2.2e-10 69.7 138 29.0
Sp1g07970 Schrenkiella parvula HOM05D013394 ORTHO05D009712 2.9e-10 69.3 149 27.5
BcaC05g24790 Brassica carinata HOM05D009911 ORTHO05D009712 3.8e-10 68.9 161 24.2
BolC5t29493H Brassica oleracea HOM05D009911 ORTHO05D009712 3.8e-10 68.9 161 24.2
SGA_v2.0_scaffold74G24614 Striga asiatica HOM05D008339 ORTHO05D009712 1.5e-09 67.0 101 35.6
Carub.0001s0870 Capsella rubella HOM05D013394 ORTHO05D009712 1.9e-09 66.6 149 29.5
CARHR009330 Cardamine hirsuta HOM05D009911 ORTHO05D009712 2.5e-09 66.2 155 27.7
Sp1g07980 Schrenkiella parvula HOM05D009911 ORTHO05D009712 5.5e-09 65.1 144 27.8
Thhalv10009592m.g Eutrema salsugineum HOM05D013394 ORTHO05D009712 7.2e-09 64.7 149 26.2
Oeu060879.1 Olea europaea HOM05D009933 ORTHO05D012084 7.2e-09 64.7 149 26.8
Sp5g12740 Schrenkiella parvula HOM05D009945 ORTHO05D012028 7.2e-09 64.7 147 30.6
C05p07360 Brassica napus HOM05D009911 ORTHO05D009712 1.6e-08 63.5 152 22.4
Nn1g08310 Nelumbo nucifera HOM05D008403 ORTHO05D010317 1.6e-08 63.5 155 25.8
A06p06100 Brassica napus HOM05D013394 ORTHO05D009712 2.1e-08 63.2 146 26.7
BraA06t23818Z Brassica rapa HOM05D009911 ORTHO05D009712 2.7e-08 62.8 157 22.9
BraA06t23823Z Brassica rapa HOM05D013394 ORTHO05D009712 2.7e-08 62.8 146 26.7
SGA_v2.0_scaffold74G24619 Striga asiatica HOM05D009933 ORTHO05D012084 2.7e-08 62.8 126 32.5
Cfa004856 Carpinus fangiana HOM05D012615 ORTHO05D010044 4.7e-08 62.0 135 24.4
Lalb_Chr12g0200791 Lupinus albus HOM05D001578 ORTHO05D001207 4.7e-08 62.0 147 28.6
VMungo1215G0592 Vigna mungo HOM05D001578 ORTHO05D001207 4.7e-08 62.0 147 27.9
Lalb_Chr07g0181951 Lupinus albus HOM05D001578 ORTHO05D001207 6.1e-08 61.6 147 28.6
A06p06070 Brassica napus HOM05D009911 ORTHO05D009712 8.0e-08 61.2 157 22.3
Sabra08G0077500 Salix brachista HOM05D001578 ORTHO05D001207 1.0e-07 60.8 140 27.1
C05p07340 Brassica napus HOM05D013394 ORTHO05D009712 1.4e-07 60.5 146 25.3
CSS0025537 Camellia sinensis var. sinensis HOM05D003556 ORTHO05D003404 1.4e-07 60.5 132 27.3
CSS0050483 Camellia sinensis var. sinensis HOM05D003556 ORTHO05D003404 1.4e-07 60.5 132 27.3
AL5G29080 Arabidopsis lyrata HOM05D009945 ORTHO05D012028 1.8e-07 60.1 153 28.1
AT3G49330 Arabidopsis thaliana HOM05D009945 ORTHO05D012028 1.8e-07 60.1 153 28.1
COL.COLO4_34581 Corchorus olitorius HOM05D001578 ORTHO05D001207 1.8e-07 60.1 145 26.9
BolC5t29496H Brassica oleracea HOM05D009911 ORTHO05D009712 2.3e-07 59.7 157 22.9
Phvul.003G116900 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 2.3e-07 59.7 139 27.3
Thecc.04G304700 Theobroma cacao HOM05D001578 ORTHO05D001207 2.3e-07 59.7 143 28.0
arahy.Tifrunner.gnm1.ann1.2R90TF Arachis hypogaea HOM05D000961 ORTHO05D001207 3.0e-07 59.3 136 27.9
C05p07390 Brassica napus HOM05D009911 ORTHO05D009712 3.0e-07 59.3 157 22.9
Medtr4g122740 Medicago truncatula HOM05D001578 ORTHO05D001207 4.0e-07 58.9 139 28.8
PGR004G1348 Punica granatum HOM05D008403 ORTHO05D010317 4.0e-07 58.9 147 27.2
Glyma.07G237500 Glycine max HOM05D001578 ORTHO05D001207 8.8e-07 57.8 147 27.2
PGSC0003DMG400038811 Solanum tuberosum HOM05D009933 ORTHO05D012084 8.8e-07 57.8 140 22.1
TPR.G25390 Trifolium pratense HOM05D001578 ORTHO05D001207 1.2e-06 57.4 148 27.7
Glyma.17G036100 Glycine max HOM05D001578 ORTHO05D001207 1.5e-06 57.0 147 26.5
Actinidia19773 Actinidia chinensis HOM05D003556 ORTHO05D003404 2.6e-06 56.2 142 30.3
QL06p012819 Quercus lobata HOM05D001578 ORTHO05D001207 3.3e-06 55.8 136 27.2
Rhsim03G0038400 Rhododendron simsii HOM05D001578 ORTHO05D001207 3.3e-06 55.8 149 28.9
Glyma.09G033700 Glycine max HOM05D001578 ORTHO05D001207 4.4e-06 55.5 139 28.1
Lalb_Chr15g0089101 Lupinus albus HOM05D001578 ORTHO05D001207 4.4e-06 55.5 139 26.6
QL09p000952 Quercus lobata HOM05D012615 ORTHO05D010044 4.4e-06 55.5 146 24.0
TWI75G0074 Tripterygium wilfordii HOM05D001578 ORTHO05D001207 4.4e-06 55.5 151 28.5
Phvul.006G119800 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 5.7e-06 55.1 147 27.9
Prupe.3G007900 Prunus persica HOM05D001445 ORTHO05D001207 5.7e-06 55.1 134 24.6
Glyma.15G138400 Glycine max HOM05D001578 ORTHO05D001207 7.5e-06 54.7 139 27.3
MBI18_g25092_MAGBIO Magnolia biondii HOM05D001445 ORTHO05D005233 9.7e-06 54.3 147 26.5
Prupe.3G007800 Prunus persica HOM05D001445 ORTHO05D001207 9.7e-06 54.3 133 25.6
Rhsim03G0038200 Rhododendron simsii HOM05D001578 ORTHO05D001207 9.7e-06 54.3 148 27.7


User provided reference genes

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