Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0007712 Sechium edule HOM05D007109 ORTHO05D008813 2.1e-158 562.4 304 100.0
ClCG10G012150 Citrullus lanatus HOM05D007109 ORTHO05D008813 1.1e-109 400.6 313 76.4
MELO3C024000.2 Cucumis melo HOM05D007109 ORTHO05D008813 5.9e-100 368.2 281 76.5
Sed0006814 Sechium edule HOM05D007109 ORTHO05D008813 1.0e-91 340.9 303 65.0
CiPaw.13G008200 Carya illinoinensis HOM05D007109 ORTHO05D008813 1.7e-59 233.8 306 46.1
Cfa010821 Carpinus fangiana HOM05D007109 ORTHO05D008813 8.1e-57 224.9 308 43.5
Dinv07428 Davidia involucrata HOM05D007109 ORTHO05D008813 4.5e-55 219.2 298 47.7
Ciclev10032181m.g Citrus clementina HOM05D007109 ORTHO05D008813 1.2e-52 211.1 310 43.9
CiPaw.15G135600 Carya illinoinensis HOM05D007109 ORTHO05D008813 1.6e-52 210.7 311 41.8
Atru.chr11.2527 Acer truncatum HOM05D007109 ORTHO05D008813 3.5e-52 209.5 336 41.7
QL04p010443 Quercus lobata HOM05D007109 ORTHO05D008813 6.0e-52 208.8 321 42.1
CiPaw.14G003600 Carya illinoinensis HOM05D007109 ORTHO05D008813 2.5e-50 203.4 311 40.5
Potri.009G055800 Populus trichocarpa HOM05D007109 ORTHO05D008813 5.3e-48 195.7 317 38.2
Thecc.01G404600 Theobroma cacao HOM05D007109 ORTHO05D008813 9.0e-48 194.9 313 41.5
Actinidia19426 Actinidia chinensis HOM05D007109 ORTHO05D008813 2.0e-47 193.7 311 39.5
TWI09G0588 Tripterygium wilfordii HOM05D007109 ORTHO05D008813 1.0e-46 191.4 275 42.2
Manes.07G011500 Manihot esculenta HOM05D007109 ORTHO05D008813 2.2e-46 190.3 307 44.3
Prupe.2G023200 Prunus persica HOM05D007109 ORTHO05D008813 6.5e-46 188.7 320 40.3
COL.COLO4_12331 Corchorus olitorius HOM05D007109 ORTHO05D008813 1.9e-45 187.2 306 39.9
Nn7g36341 Nelumbo nucifera HOM05D007109 ORTHO05D008813 1.2e-44 184.5 300 39.0
Duzib138G1369 Durio zibethinus HOM05D007109 ORTHO05D008813 1.6e-44 184.1 314 39.2
Duzib268G1698 Durio zibethinus HOM05D007109 ORTHO05D008813 2.7e-44 183.3 299 38.8
RcHm_v2.0_Chr1g0318291 Rosa chinensis HOM05D007109 ORTHO05D008813 3.5e-44 183.0 312 38.1
Eucgr.G03285 Eucalyptus grandis HOM05D007109 ORTHO05D008813 6.0e-44 182.2 318 40.3
Gorai.004G169100 Gossypium raimondii HOM05D007109 ORTHO05D008813 7.9e-44 181.8 318 38.1
Duzib133G0385 Durio zibethinus HOM05D007109 ORTHO05D008813 1.0e-43 181.4 315 37.5
Gohir.D08G162700 Gossypium hirsutum HOM05D007109 ORTHO05D008813 5.1e-43 179.1 309 38.2
Sabra09G0040900 Salix brachista HOM05D007109 ORTHO05D008813 5.1e-43 179.1 307 36.8
FvH4_7g01730 Fragaria vesca HOM05D007109 ORTHO05D008813 8.7e-43 178.3 318 37.1
FAN06G2427 Fragaria x ananassa HOM05D007109 ORTHO05D008813 8.7e-43 178.3 318 37.1
Manes.10G135500 Manihot esculenta HOM05D007109 ORTHO05D008813 1.3e-41 174.5 279 38.7
Rhsim01G0124900 Rhododendron simsii HOM05D007109 ORTHO05D008813 1.3e-41 174.5 298 38.3
TWI73G0029 Tripterygium wilfordii HOM05D007109 ORTHO05D008813 2.8e-41 173.3 277 39.4
FAN03G1693 Fragaria x ananassa HOM05D007109 ORTHO05D008813 3.7e-41 172.9 319 37.3
Cc02_g28960 Coffea canephora HOM05D007109 ORTHO05D008813 2.4e-40 170.2 307 36.2
CANSAT80G2748 Cannabis sativa HOM05D007109 ORTHO05D008813 3.1e-40 169.9 280 39.6
Cpa.g.c33908 Carica papaya HOM05D007109 ORTHO05D008813 9.0e-40 168.3 320 34.7
Cpa.g.sc125.54 Carica papaya HOM05D007109 ORTHO05D008813 2.0e-39 167.2 323 35.0
Rhsim07G0059100 Rhododendron simsii HOM05D007109 ORTHO05D008813 2.6e-39 166.8 318 37.1
FAN10G2826 Fragaria x ananassa HOM05D007109 ORTHO05D008813 3.4e-39 166.4 281 39.1
MD07G1022700 Malus domestica HOM05D007109 ORTHO05D008813 7.6e-39 165.2 312 38.8
Lalb_Chr01g0000491 Lupinus albus HOM05D007109 ORTHO05D008813 1.3e-38 164.5 329 35.0
TAR633G0887 Trochodendron aralioides HOM05D007109 ORTHO05D008813 1.3e-38 164.5 283 39.9
Ca_26440_v3 Cicer arietinum L. HOM05D007109 ORTHO05D008813 3.8e-38 162.9 298 36.2
Nitab4.5_0004222g0010 Nicotiana tabacum HOM05D007109 ORTHO05D008813 5.0e-38 162.5 301 35.5
CsaV3_3G031910 Cucumis sativus L. HOM05D007109 ORTHO05D008813 6.5e-38 162.2 129 78.3
vmacro13701 Vaccinium macrocarpon HOM05D007109 ORTHO05D008813 6.5e-38 162.2 313 36.7
Nitab4.5_0001244g0020 Nicotiana tabacum HOM05D007109 ORTHO05D008813 1.4e-37 161.0 302 36.4
Psat7g150920 Pisum sativum HOM05D007109 ORTHO05D008813 1.4e-37 161.0 307 37.1
Glyma.04G142400 Glycine max HOM05D007109 ORTHO05D008813 1.9e-37 160.6 315 36.5
MD07G1022600 Malus domestica HOM05D007109 ORTHO05D008813 1.9e-37 160.6 317 36.6
MD02G1301300 Malus domestica HOM05D007109 ORTHO05D008813 1.2e-36 157.9 314 37.6
Phvul.005G036000 Phaseolus vulgaris HOM05D007109 ORTHO05D008813 2.7e-36 156.8 318 35.5
Actinidia23253 Actinidia chinensis HOM05D007109 ORTHO05D008813 3.5e-36 156.4 234 43.2
Lj3g0020735 Lotus japonicus HOM05D007109 ORTHO05D008813 4.6e-36 156.0 316 36.7
arahy.Tifrunner.gnm1.ann1.K9M8RY Arachis hypogaea HOM05D007109 ORTHO05D008813 7.9e-36 155.2 332 34.0
vmacro13699 Vaccinium macrocarpon HOM05D007109 ORTHO05D008813 1.0e-35 154.8 313 35.5
Lsat_1_v5_gn_1_104720 Lactuca sativa HOM05D007109 ORTHO05D008813 3.0e-35 153.3 282 35.1
Glyma.11G159021 Glycine max HOM05D007109 ORTHO05D008813 6.7e-35 152.1 322 36.6
Medtr0003s0580 Medicago truncatula HOM05D007109 ORTHO05D008813 2.5e-34 150.2 316 35.1
Oeu014598.1 Olea europaea HOM05D007109 ORTHO05D008813 4.3e-34 149.4 294 34.7
TPR.G14571 Trifolium pratense HOM05D007109 ORTHO05D008813 4.3e-34 149.4 301 34.6
Lalb_Chr25g0282601 Lupinus albus HOM05D007109 ORTHO05D008813 9.7e-34 148.3 305 33.1
Sed0023192 Sechium edule HOM05D007109 ORTHO05D008813 9.7e-34 148.3 296 34.8
TPR.G8349 Trifolium pratense HOM05D007109 ORTHO05D008813 9.7e-34 148.3 319 34.5
MSTRG.17005 Avicennia marina HOM05D007109 ORTHO05D008813 1.3e-33 147.9 281 35.6
ECA248G3518 Erigeron canadensis HOM05D007109 ORTHO05D008813 1.3e-33 147.9 286 37.4
PGSC0003DMG400041994 Solanum tuberosum HOM05D007109 ORTHO05D008813 1.3e-33 147.9 309 33.7
PGSC0003DMG402006771 Solanum tuberosum HOM05D007109 ORTHO05D008813 1.3e-33 147.9 309 33.7
Lsat_1_v5_gn_1_104740 Lactuca sativa HOM05D007109 ORTHO05D008813 1.6e-33 147.5 292 34.9
HanXRQChr01g0007891 Helianthus annuus HOM05D007109 ORTHO05D008813 2.2e-33 147.1 290 34.1
ClCG09G004450 Citrullus lanatus HOM05D007109 ORTHO05D008813 1.8e-32 144.1 309 33.0
CAN.G909.14 Capsicum annuum HOM05D007109 ORTHO05D008813 2.4e-32 143.7 308 33.1
CsaV3_7G030690 Cucumis sativus L. HOM05D007109 ORTHO05D008813 3.1e-32 143.3 310 33.5
Lj3g0012595 Lotus japonicus HOM05D007109 ORTHO05D008813 4.1e-32 142.9 341 30.2
MSTRG.20556 Avicennia marina HOM05D007109 ORTHO05D008813 5.3e-32 142.5 262 38.2
MSTRG.5044 Avicennia marina HOM05D007109 ORTHO05D008813 1.2e-31 141.4 301 35.2
Peaxi162Scf01108g00310 Petunia axillaris HOM05D007109 ORTHO05D008813 4.5e-31 139.4 284 33.8
Medtr3g028060 Medicago truncatula HOM05D007109 ORTHO05D008813 5.9e-31 139.0 307 33.2
THA.LOC104827430 Tarenaya hassleriana HOM05D007109 ORTHO05D008813 5.9e-31 139.0 310 33.9
Hma1.2p1_0269F.1_g107760 Hydrangea macrophylla HOM05D007109 ORTHO05D008813 7.7e-31 138.7 309 36.2
Sopen01g034880 Solanum pennellii HOM05D007109 ORTHO05D008813 2.9e-30 136.7 312 33.3
MELO3C023587.2 Cucumis melo HOM05D007109 ORTHO05D008813 6.5e-30 135.6 310 33.9
Oeu049473.1 Olea europaea HOM05D007109 ORTHO05D008813 4.2e-29 132.9 257 35.8
Sed0019738 Sechium edule HOM05D007109 ORTHO05D008813 4.2e-29 132.9 289 34.9
Gohir.A08G141600 Gossypium hirsutum HOM05D007109 ORTHO05D008813 1.8e-27 127.5 318 33.0
AUR62023101 Chenopodium quinoa HOM05D007109 ORTHO05D008813 5.7e-26 122.5 258 34.5
VMungo1080G0219 Vigna mungo HOM05D007109 ORTHO05D008813 7.4e-26 122.1 226 37.6
Migut.B01259 Erythranthe guttata HOM05D007109 ORTHO05D008813 2.2e-25 120.6 302 31.5
AUR62009423 Chenopodium quinoa HOM05D007109 ORTHO05D008813 3.7e-25 119.8 254 34.3
Migut.B01258 Erythranthe guttata HOM05D007109 ORTHO05D008813 1.1e-24 118.2 272 32.4
Ca_27474_v3 Cicer arietinum L. HOM05D007109 ORTHO05D008813 2.6e-23 113.6 263 30.8
Solyc01g087980.4 Solanum lycopersicum HOM05D007109 ORTHO05D008813 2.9e-22 110.2 265 31.3
Sc14g0004980 Simmondsia chinensis HOM05D007109 ORTHO05D008813 3.2e-21 106.7 340 28.5
Ah.10g038560 Amaranthus hybridus HOM05D007109 ORTHO05D008813 9.4e-21 105.1 306 29.1
Medtr3g034410 Medicago truncatula HOM05D007109 ORTHO05D008813 2.7e-20 103.6 300 29.3
Medtr3g034370 Medicago truncatula HOM05D007109 ORTHO05D008813 5.7e-18 95.9 180 38.3
SGA_v2.0_scaffold4G02475 Striga asiatica HOM05D007109 ORTHO05D008813 7.4e-18 95.5 283 28.6
SalBow5G4816 Salvia bowleyana HOM05D007109 ORTHO05D008813 1.3e-17 94.7 293 26.6
SGA_v2.0_scaffold354G49753 Striga asiatica HOM05D007109 ORTHO05D008813 1.3e-17 94.7 318 30.8
SalBow5G4465 Salvia bowleyana HOM05D007109 ORTHO05D008813 1.7e-17 94.4 252 27.4
Actinidia08354 Actinidia chinensis HOM05D007109 ORTHO05D008813 6.5e-14 82.4 230 33.0
Actinidia25349 Actinidia chinensis HOM05D007109 ORTHO05D008813 6.5e-14 82.4 230 33.0
Gohir.A12G100450 Gossypium hirsutum HOM05D007109 ORTHO05D008813 6.1e-12 75.9 109 42.2
unitig_22.g5431 Utricularia gibba HOM05D007109 ORTHO05D008813 1.4e-11 74.7 241 33.2
Solyc04g050200.1 Solanum lycopersicum HOM05D007109 ORTHO05D008813 4.8e-09 66.2 155 31.6
Aa31LG1G10730 Aethionema arabicum HOM05D002440 ORTHO05D002576 3.1e-08 63.5 271 24.0
MELO3C006091.2 Cucumis melo HOM05D002440 ORTHO05D002576 5.3e-08 62.8 238 27.7
TPR.G40170 Trifolium pratense HOM05D007109 ORTHO05D008813 7.0e-08 62.4 83 41.0
CsaV3_3G008740 Cucumis sativus L. HOM05D002440 ORTHO05D002576 1.6e-07 61.2 238 26.5
Medtr3g034540 Medicago truncatula HOM05D007109 ORTHO05D008813 1.0e-06 58.5 124 30.6
THA.LOC104817309 Tarenaya hassleriana HOM05D002440 ORTHO05D002576 1.3e-06 58.2 284 26.4
CiPaw.08G144600 Carya illinoinensis HOM05D007109 ORTHO05D008813 3.8e-06 56.6 66 47.0


User provided reference genes

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