Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0007690 Sechium edule HOM05D008517 ORTHO05D010482 1.2e-124 449.9 232 100.0
ClCG03G000030 Citrullus lanatus HOM05D008517 ORTHO05D010482 8.4e-54 214.5 243 50.6
MELO3C020481.2 Cucumis melo HOM05D008517 ORTHO05D010482 3.0e-51 206.1 231 50.6
Ca_15071_v3 Cicer arietinum L. HOM05D008517 ORTHO05D010482 2.0e-15 87.0 190 29.5
Medtr3g062470 Medicago truncatula HOM05D008517 ORTHO05D010482 2.0e-15 87.0 191 29.3
Manes.02G211300 Manihot esculenta HOM05D008517 ORTHO05D010482 2.9e-14 83.2 163 31.3
PGR119G1844 Punica granatum HOM05D008517 ORTHO05D010482 6.5e-14 82.0 235 28.9
TPR.G13887 Trifolium pratense HOM05D008517 ORTHO05D010482 6.5e-14 82.0 190 29.5
Eucgr.J01845 Eucalyptus grandis HOM05D008517 ORTHO05D010482 8.5e-14 81.6 237 27.4
Lj6g0010191 Lotus japonicus HOM05D008517 ORTHO05D010482 1.1e-13 81.3 189 28.0
Phvul.006G080100 Phaseolus vulgaris HOM05D008517 ORTHO05D010482 3.2e-13 79.7 207 28.5
Psat5g147520 Pisum sativum HOM05D008517 ORTHO05D010482 4.2e-13 79.3 190 29.5
VMungo0540G2173 Vigna mungo HOM05D008517 ORTHO05D010482 5.5e-13 79.0 191 26.7
Thhalv10016822m.g Eutrema salsugineum HOM05D008517 ORTHO05D010482 1.6e-12 77.4 219 29.2
arahy.Tifrunner.gnm1.ann1.Q24W9G Arachis hypogaea HOM05D008517 ORTHO05D010482 2.7e-12 76.6 251 25.5
TAR633G1539 Trochodendron aralioides HOM05D000050 ORTHO05D010482 2.7e-12 76.6 235 28.5
FAN21G3878 Fragaria x ananassa HOM05D016692 ORTHO05D010482 3.6e-12 76.3 175 28.6
Lalb_Chr18g0054121 Lupinus albus HOM05D008517 ORTHO05D010482 3.6e-12 76.3 203 29.1
arahy.Tifrunner.gnm1.ann1.92WL97 Arachis hypogaea HOM05D008517 ORTHO05D010482 4.7e-12 75.9 251 25.5
Sp4g13060 Schrenkiella parvula HOM05D008517 ORTHO05D010482 6.1e-12 75.5 251 29.9
CARHR123960 Cardamine hirsuta HOM05D008517 ORTHO05D010482 1.0e-11 74.7 210 30.0
Cpa.g.sc2.275 Carica papaya HOM05D008517 ORTHO05D010482 1.4e-11 74.3 170 31.2
Lalb_Chr15g0085691 Lupinus albus HOM05D008517 ORTHO05D010482 1.4e-11 74.3 238 29.0
BcaB06g28372 Brassica carinata HOM05D008517 ORTHO05D010482 1.8e-11 73.9 220 27.3
Carub.0004s1167 Capsella rubella HOM05D008517 ORTHO05D010482 1.8e-11 73.9 192 29.2
Glyma.11G199600 Glycine max HOM05D008517 ORTHO05D010482 1.8e-11 73.9 162 28.4
BcaB02g10328 Brassica carinata HOM05D008517 ORTHO05D010482 2.3e-11 73.6 193 31.1
RcHm_v2.0_Chr5g0073561 Rosa chinensis HOM05D016692 ORTHO05D010482 2.3e-11 73.6 228 27.6
AT2G30505 Arabidopsis thaliana HOM05D008517 ORTHO05D010482 3.9e-11 72.8 192 29.7
BcaC02g08016 Brassica carinata HOM05D008517 ORTHO05D010482 3.9e-11 72.8 191 28.3
C04p59390 Brassica napus HOM05D008517 ORTHO05D010482 3.9e-11 72.8 191 28.3
BolC4t27447H Brassica oleracea HOM05D008517 ORTHO05D010482 3.9e-11 72.8 191 28.3
BcaC02g11142 Brassica carinata HOM05D008517 ORTHO05D010482 8.8e-11 71.6 220 27.7
C04p20010 Brassica napus HOM05D008517 ORTHO05D010482 8.8e-11 71.6 220 27.7
BolC4t23540H Brassica oleracea HOM05D008517 ORTHO05D010482 8.8e-11 71.6 220 27.7
BraA04t17851Z Brassica rapa HOM05D008517 ORTHO05D010482 8.8e-11 71.6 191 28.3
MD11G1051900 Malus domestica HOM05D016692 ORTHO05D010482 8.8e-11 71.6 241 26.1
AL4G25390 Arabidopsis lyrata HOM05D008517 ORTHO05D010482 1.1e-10 71.2 192 29.2
Glyma.18G051200 Glycine max HOM05D008517 ORTHO05D010482 3.3e-10 69.7 162 27.8
A05p14960 Brassica napus HOM05D008517 ORTHO05D010482 5.7e-10 68.9 220 27.3
BraA05t20422Z Brassica rapa HOM05D008517 ORTHO05D010482 5.7e-10 68.9 220 27.3
MD03G1049700 Malus domestica HOM05D016692 ORTHO05D010482 6.3e-09 65.5 228 26.8
PSO210G0246 Papaver somniferum HOM05D002137 ORTHO05D002144 6.3e-09 65.5 194 24.7
PSO210G7526 Papaver somniferum HOM05D002137 ORTHO05D002144 8.2e-09 65.1 194 24.7
Zm00001eb160190 Zea mays HOM05D002137 ORTHO05D002144 1.4e-08 64.3 205 25.9
Aa31LG5G6260 Aethionema arabicum HOM05D008517 ORTHO05D010482 2.4e-08 63.5 209 26.3
Prupe.6G039500 Prunus persica HOM05D016692 ORTHO05D010482 4.1e-08 62.8 234 26.1
Atru.chr10.2344 Acer truncatum HOM05D008517 ORTHO05D010482 7.0e-08 62.0 222 25.2
Lj2A1104T76 Lonicera japonica HOM05D008517 ORTHO05D010482 9.1e-08 61.6 232 25.9
Actinidia23156 Actinidia chinensis HOM05D000033 ORTHO05D000913 1.2e-07 61.2 214 25.7
CARHR000970 Cardamine hirsuta HOM05D005178 ORTHO05D006123 2.6e-07 60.1 217 26.7
CSS0018299 Camellia sinensis var. sinensis HOM05D008517 ORTHO05D010482 5.9e-07 58.9 247 27.1
Sed0006216 Sechium edule HOM05D005178 ORTHO05D006123 5.9e-07 58.9 185 25.9
Rhsim13G0058200 Rhododendron simsii HOM05D008517 ORTHO05D010482 7.7e-07 58.5 188 23.9
CsaV3_3G043870 Cucumis sativus L. HOM05D002137 ORTHO05D002144 1.0e-06 58.2 199 21.6
Zm00001eb357160 Zea mays HOM05D002137 ORTHO05D002144 1.0e-06 58.2 154 27.3
Sc01g0002990 Simmondsia chinensis HOM05D005178 ORTHO05D006123 1.7e-06 57.4 138 27.5
CSS0025872 Camellia sinensis var. sinensis HOM05D002137 ORTHO05D002144 3.8e-06 56.2 141 23.4
MELO3C013058.2 Cucumis melo HOM05D002137 ORTHO05D002144 8.5e-06 55.1 199 20.1
Os01g0574800 Oryza sativa ssp. japonica HOM05D002137 ORTHO05D002144 8.5e-06 55.1 166 23.5


User provided reference genes

Program Settings