Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 1.8e-215 752.3 369 100.0
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 4.1e-188 661.4 369 87.3
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 9.5e-185 650.2 369 85.9
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 5.1e-162 574.7 474 65.0
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 1.6e-155 553.1 353 72.2
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 3.0e-154 548.9 351 73.2
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 1.1e-153 547.0 360 71.9
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 1.5e-153 546.6 351 72.9
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 2.5e-153 545.8 351 73.2
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 3.3e-153 545.4 351 71.8
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 4.8e-152 541.6 355 70.7
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 8.1e-152 540.8 351 69.2
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 1.8e-151 539.7 367 69.5
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 4.0e-151 538.5 367 68.9
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 1.2e-150 537.0 360 67.8
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 2.0e-150 536.2 351 70.7
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 4.5e-150 535.0 353 70.0
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 2.9e-149 532.3 331 74.9
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 1.1e-148 530.4 355 70.4
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 4.2e-148 528.5 365 67.9
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 4.2e-148 528.5 351 69.2
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 9.3e-148 527.3 350 68.3
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 2.7e-147 525.8 350 69.4
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 3.5e-147 525.4 353 70.3
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 3.5e-147 525.4 350 68.6
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 6.0e-147 524.6 350 69.4
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 6.0e-147 524.6 366 67.2
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 7.9e-147 524.2 450 59.1
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 1.0e-146 523.9 356 69.9
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 8.7e-146 520.8 352 69.9
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 8.7e-146 520.8 349 68.8
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 1.1e-145 520.4 350 68.6
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 2.5e-145 519.2 350 68.6
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 3.3e-145 518.8 351 68.7
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 9.6e-145 517.3 351 68.4
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 1.3e-144 516.9 362 67.4
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 2.8e-144 515.8 351 69.5
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 3.7e-144 515.4 350 68.0
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 5.3e-143 511.5 352 66.8
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 1.5e-142 510.0 352 66.8
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 1.5e-142 510.0 417 59.7
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 1.5e-142 510.0 385 63.4
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 2.6e-142 509.2 435 58.4
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 4.5e-142 508.4 355 67.6
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 1.7e-141 506.5 351 67.0
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 2.5e-140 502.7 357 64.7
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 3.2e-140 502.3 355 66.5
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 5.5e-140 501.5 354 66.4
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 1.3e-138 496.9 352 66.5
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 3.0e-138 495.7 351 64.7
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 8.2e-136 487.6 364 64.8
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 6.9e-135 484.6 357 63.9
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 5.5e-132 474.9 352 60.8
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 2.1e-131 473.0 355 61.7
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 6.7e-130 468.0 319 66.8
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 1.6e-128 463.4 354 62.4
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 1.6e-128 463.4 354 62.4
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 4.8e-128 461.8 354 62.1
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 1.4e-127 460.3 352 60.8
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 2.4e-127 459.5 355 62.8
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 7.7e-126 454.5 350 63.1
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 2.1e-123 446.4 498 49.0
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 2.0e-121 439.9 354 62.1
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 1.5e-105 387.1 286 63.6
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 2.3e-90 336.7 353 45.0
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 3.0e-90 336.3 291 57.4
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 5.7e-89 332.0 358 46.9
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 3.1e-87 326.2 189 76.7
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 7.7e-86 321.6 197 71.1
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 4.2e-84 315.8 230 62.6
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 4.2e-84 315.8 343 49.6
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 4.5e-78 295.8 215 65.6
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 1.4e-66 257.7 156 73.1
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 1.2e-62 244.6 249 51.4
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 3.5e-62 243.0 152 70.4
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 1.7e-61 240.7 231 48.9
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 3.6e-59 233.0 357 37.8
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 2.8e-51 206.8 140 65.7
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 3.2e-47 193.4 157 61.1
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 7.3e-44 182.2 422 29.1
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 2.6e-41 173.7 106 73.6
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 1.1e-39 168.3 128 66.4
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 2.4e-39 167.2 390 32.3
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 2.1e-27 127.5 105 54.3
SalBow7G1135 Salvia bowleyana HOM05D007327 ORTHO05D009342 8.1e-27 125.6 103 60.2
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 1.5e-25 121.3 104 50.0
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 2.0e-25 120.9 69 73.9
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 7.6e-25 119.0 73 68.5
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 2.2e-24 117.5 76 63.2
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 2.2e-24 117.5 76 63.2
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 6.5e-24 115.9 70 80.0
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 8.4e-24 115.5 70 78.6
MBI17_g25900_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 8.4e-24 115.5 102 57.8
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.5e-23 114.0 70 78.6
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 7.1e-23 112.5 70 78.6
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 7.9e-22 109.0 292 29.8
MBI17_g33124_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.0e-21 108.6 113 52.2
HPP92_000064 Vanilla planifolia HOM05D007327 ORTHO05D009342 3.1e-18 97.1 73 64.4
MBI17_g33120_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 9.0e-18 95.5 96 45.8
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.0e-17 94.4 91 58.2
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 3.2e-15 87.0 55 65.5
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 4.2e-15 86.7 59 69.5
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 5.1e-13 79.7 52 63.5
arahy.Tifrunner.gnm1.ann1.B7BSQF Arachis hypogaea HOM05D000002 ORTHO05D000047 2.0e-09 67.8 180 33.3
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 2.6e-09 67.4 64 45.3
arahy.Tifrunner.gnm1.ann1.KIIE1S Arachis hypogaea HOM05D000198 ORTHO05D003365 1.3e-08 65.1 61 49.2


User provided reference genes

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