Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0007601 Sechium edule HOM05D004909 ORTHO05D009316 0.0e+00 1781.1 880 100.0
Sed0025836 Sechium edule HOM05D004909 ORTHO05D009316 1.3e-277 959.9 524 92.2
SEGI_22240 Sequoiadendron giganteum HOM05D004909 ORTHO05D009316 1.0e-205 721.1 826 49.4
Actinidia34900 Actinidia chinensis HOM05D004909 ORTHO05D009316 1.4e-197 694.1 840 47.0
EL10Ac7g16726 Beta vulgaris HOM05D004909 ORTHO05D009316 7.8e-161 572.0 795 40.5
AUR62042355 Chenopodium quinoa HOM05D004909 ORTHO05D009316 2.6e-156 557.0 807 40.9
AUR62043789 Chenopodium quinoa HOM05D004909 ORTHO05D009316 2.6e-156 557.0 807 40.9
AUR62043900 Chenopodium quinoa HOM05D004909 ORTHO05D009316 2.6e-156 557.0 807 40.9
THA.LOC109116692 Tarenaya hassleriana HOM05D004909 ORTHO05D009316 2.6e-156 557.0 428 63.3
Glyma.15G187700 Glycine max HOM05D004909 ORTHO05D009316 1.5e-148 531.2 600 46.2
DCAR_032462 Daucus carota HOM05D004909 ORTHO05D009316 3.5e-145 520.0 876 36.6
Aqoxy2G02244 Aquilegia oxysepala HOM05D004909 ORTHO05D009316 7.9e-145 518.8 794 38.0
Aqoxy3G01127 Aquilegia oxysepala HOM05D004909 ORTHO05D009316 7.9e-145 518.8 794 38.0
AUR62026823 Chenopodium quinoa HOM05D004909 ORTHO05D009316 7.4e-135 485.7 682 41.2
SHI34934 Sapria himalayana HOM05D004909 ORTHO05D009316 7.9e-129 465.7 762 39.2
SHI35584 Sapria himalayana HOM05D004909 ORTHO05D009316 2.5e-127 460.7 596 44.3
Sed0005050 Sechium edule HOM05D004909 ORTHO05D009316 5.3e-125 453.0 544 45.4
AUR62042351 Chenopodium quinoa HOM05D004909 ORTHO05D009316 2.6e-119 434.1 705 38.7
Lalb_Chr00c21g0405621 Lupinus albus HOM05D004909 ORTHO05D009316 5.7e-119 433.0 360 55.8
Sc13g0007740 Simmondsia chinensis HOM05D004909 ORTHO05D009316 1.3e-118 431.8 732 38.8
EL10Ac1g02201 Beta vulgaris HOM05D004909 ORTHO05D009316 3.2e-114 417.2 770 34.5
vmacro17405 Vaccinium macrocarpon HOM05D004909 ORTHO05D009316 1.0e-112 412.1 318 61.6
HPP92_026900 Vanilla planifolia HOM05D004909 ORTHO05D009316 2.0e-111 407.9 341 58.9
RcHm_v2.0_Chr6g0256721 Rosa chinensis HOM05D006604 ORTHO05D007974 3.3e-111 407.1 391 55.0
Lalb_Chr11g0070061 Lupinus albus HOM05D004909 ORTHO05D009316 1.6e-105 388.3 522 39.1
Lj2A1227T106 Lonicera japonica HOM05D004909 ORTHO05D009316 3.8e-99 367.1 309 57.6
Oeu050987.1 Olea europaea HOM05D004909 ORTHO05D009625 5.5e-98 363.2 341 58.9
PGR044G0991 Punica granatum HOM05D004909 ORTHO05D009316 2.0e-95 354.8 448 42.4
Oeu050988.1 Olea europaea HOM05D004909 ORTHO05D009625 2.2e-94 351.3 401 52.6
SHI44822 Sapria himalayana HOM05D004909 ORTHO05D009316 1.2e-92 345.5 249 64.3
SHI44820 Sapria himalayana HOM05D004909 ORTHO05D009316 7.7e-92 342.8 275 58.9
CsaV3_UNG209050 Cucumis sativus L. HOM05D004909 ORTHO05D009316 1.7e-86 325.1 332 49.7
TWI14G0838 Tripterygium wilfordii HOM05D004909 ORTHO05D009316 1.2e-84 318.9 390 47.7
Cc00_g01790 Coffea canephora HOM05D004909 ORTHO05D009316 9.2e-69 266.2 356 41.3
Peaxi162Scf00651g00626 Petunia axillaris HOM05D004909 ORTHO05D009316 3.9e-67 260.8 560 33.8
AUR62037530 Chenopodium quinoa HOM05D004909 ORTHO05D009316 4.0e-64 250.8 508 33.9
Nitab4.5_0004300g0260 Nicotiana tabacum HOM05D004909 ORTHO05D009316 5.8e-63 246.9 317 44.8
Nitab4.5_0010033g0040 Nicotiana tabacum HOM05D004909 ORTHO05D009316 1.9e-61 241.9 296 48.0
Sc15g0003200 Simmondsia chinensis HOM05D004909 ORTHO05D009316 1.8e-56 225.3 154 66.2
AUR62043915 Chenopodium quinoa HOM05D004909 ORTHO05D009316 2.9e-54 218.0 476 32.4
CAN.G505.15 Capsicum annuum HOM05D004909 ORTHO05D009316 2.1e-52 211.8 354 35.3
arahy.Tifrunner.gnm1.ann1.HS2KB4 Arachis hypogaea HOM05D004909 ORTHO05D009316 1.7e-51 208.8 351 39.9
EL10Ac1g01434 Beta vulgaris HOM05D004909 ORTHO05D009316 5.1e-51 207.2 373 33.8
AUR62042356 Chenopodium quinoa HOM05D004909 ORTHO05D009316 9.9e-47 193.0 405 32.8
AUR62029835 Chenopodium quinoa HOM05D004909 ORTHO05D009316 4.9e-46 190.7 374 33.2
Peaxi162Scf00456g00034 Petunia axillaris HOM05D004909 ORTHO05D009316 1.2e-44 186.0 368 34.2
Nitab4.5_0000081g0150 Nicotiana tabacum HOM05D004909 ORTHO05D009625 1.2e-39 169.5 214 44.4
CAN.G1542.8 Capsicum annuum HOM05D004909 ORTHO05D009316 2.0e-39 168.7 151 55.0
AUR62038224 Chenopodium quinoa HOM05D000613 ORTHO05D000446 3.8e-38 164.5 131 58.8
CAN.G7.24 Capsicum annuum HOM05D004909 ORTHO05D009316 1.5e-31 142.5 136 50.7
Peaxi162Scf00625g00037 Petunia axillaris HOM05D002660 ORTHO05D003902 2.6e-31 141.7 592 24.5
Nitab4.5_0001526g0140 Nicotiana tabacum HOM05D004909 ORTHO05D009316 3.8e-30 137.9 224 37.5
Sc02g0004080 Simmondsia chinensis HOM05D004909 ORTHO05D009316 8.4e-30 136.7 461 27.5
Nitab4.5_0001681g0080 Nicotiana tabacum HOM05D004909 ORTHO05D009316 1.1e-29 136.3 274 31.0
Solyc03g013470.1 Solanum lycopersicum HOM05D004909 ORTHO05D009316 7.1e-29 133.7 105 60.0
Nitab4.5_0000580g0100 Nicotiana tabacum HOM05D004909 ORTHO05D009316 7.9e-28 130.2 261 31.8
Sopen05g027060 Solanum pennellii HOM05D000213 ORTHO05D011567 2.3e-27 128.6 182 41.2
EL10Ac6g15711 Beta vulgaris HOM05D004909 ORTHO05D009316 3.0e-27 128.3 114 50.0
AUR62043790 Chenopodium quinoa HOM05D004909 ORTHO05D009316 3.0e-27 128.3 101 57.4
AUR62043901 Chenopodium quinoa HOM05D004909 ORTHO05D009316 3.0e-27 128.3 101 57.4
COL.COLO4_04384 Corchorus olitorius HOM05D004909 ORTHO05D009316 1.9e-26 125.6 84 69.0
Lj2P1224T90 Lonicera japonica HOM05D004909 ORTHO05D009316 2.8e-25 121.7 99 54.5
Potri.007G061821 Populus trichocarpa HOM05D004909 ORTHO05D009316 1.8e-24 119.0 191 39.8
AUR62043914 Chenopodium quinoa HOM05D000533 ORTHO05D001069 1.2e-23 116.3 263 31.9
EL10Ac7g16568 Beta vulgaris HOM05D004909 ORTHO05D009316 2.2e-22 112.1 113 54.0
EL10As18g24157 Beta vulgaris HOM05D004909 ORTHO05D009316 6.5e-22 110.5 96 58.3
CAN.G505.9 Capsicum annuum HOM05D004909 ORTHO05D009316 1.1e-21 109.8 138 44.2
EL10Ac1g01432 Beta vulgaris HOM05D004909 ORTHO05D009316 2.1e-20 105.5 156 39.1
Solyc05g045890.1 Solanum lycopersicum HOM05D004909 ORTHO05D009625 3.9e-19 101.3 196 35.2
AUR62022155 Chenopodium quinoa HOM05D005031 ORTHO05D006098 6.7e-19 100.5 176 35.8
SGA_v2.0_scaffold328G48796 Striga asiatica HOM05D004909 ORTHO05D009316 1.9e-18 99.0 60 70.0
Oeu022816.1 Olea europaea HOM05D004909 ORTHO05D009316 7.4e-18 97.1 90 56.7
CAN.G733.11 Capsicum annuum HOM05D004909 ORTHO05D009316 9.7e-18 96.7 101 47.5
Nitab4.5_0000351g0260 Nicotiana tabacum HOM05D004909 ORTHO05D009316 8.2e-17 93.6 76 57.9
Nitab4.5_0000580g0140 Nicotiana tabacum HOM05D004909 ORTHO05D009316 1.8e-16 92.4 105 47.6
HPP92_021361 Vanilla planifolia HOM05D004909 ORTHO05D009316 1.8e-16 92.4 64 64.1
arahy.Tifrunner.gnm1.ann1.MAXI5J Arachis hypogaea HOM05D004909 ORTHO05D009316 3.4e-15 88.2 62 64.5
AUR62043791 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.3e-14 86.3 102 45.1
AUR62043902 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.3e-14 86.3 102 45.1
CAN.G505.10 Capsicum annuum HOM05D004909 ORTHO05D009316 2.9e-14 85.1 71 56.3
EL10Ac7g17805 Beta vulgaris HOM05D004909 ORTHO05D009316 3.8e-14 84.7 297 24.9
arahy.Tifrunner.gnm1.ann1.0IJH8U Arachis hypogaea HOM05D012997 ORTHO05D014434 1.4e-13 82.8 62 67.7
Nitab4.5_0003083g0030 Nicotiana tabacum HOM05D004909 ORTHO05D009316 1.4e-13 82.8 98 48.0
Lalb_Chr00c21g0405631 Lupinus albus HOM05D004909 ORTHO05D009316 2.5e-13 82.0 184 27.2
CAN.G1858.5 Capsicum annuum HOM05D004909 ORTHO05D009316 7.2e-13 80.5 162 34.0
Solyc05g045720.1 Solanum lycopersicum HOM05D004909 ORTHO05D009625 9.4e-13 80.1 139 34.5
Sopen05g027030 Solanum pennellii HOM05D000213 ORTHO05D011567 1.2e-12 79.7 175 31.4
Oeu013314.1 Olea europaea HOM05D000129 ORTHO05D000144 3.0e-11 75.1 47 63.8
Peaxi162Scf00456g00033 Petunia axillaris HOM05D004909 ORTHO05D009316 3.0e-11 75.1 111 44.1
CAN.G14.29 Capsicum annuum HOM05D004909 ORTHO05D009316 8.8e-11 73.6 77 49.4
Hma1.2p1_0003F.1_g003590 Hydrangea macrophylla HOM05D004909 ORTHO05D009316 1.3e-09 69.7 131 34.4
Peaxi162Scf00625g00034 Petunia axillaris HOM05D002660 ORTHO05D003902 2.2e-09 68.9 104 37.5
Nitab4.5_0005140g0040 Nicotiana tabacum HOM05D004909 ORTHO05D009625 6.3e-09 67.4 76 47.4
Nitab4.5_0001796g0070 Nicotiana tabacum HOM05D004909 ORTHO05D009316 8.2e-09 67.0 78 51.3
unitig_87.g28025 Utricularia gibba HOM05D004909 ORTHO05D009316 1.8e-08 65.9 62 41.9
Nitab4.5_0002276g0060 Nicotiana tabacum HOM05D004909 ORTHO05D009316 9.1e-08 63.5 69 47.8
ClCG05G022450 Citrullus lanatus HOM05D004909 ORTHO05D009316 1.5e-07 62.8 71 47.9
Solyc00g500345.1 Solanum lycopersicum HOM05D000743 ORTHO05D000580 1.0e-06 60.1 73 43.8
CAN.G100.53 Capsicum annuum HOM05D004909 ORTHO05D009316 6.5e-06 57.4 44 56.8


User provided reference genes

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