Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0007590 Sechium edule HOM05D059529 ORTHO05D000710 1.7e-105 386.0 191 100.0
Sed0007444 Sechium edule HOM05D000899 ORTHO05D000710 2.3e-33 146.4 88 76.1
Sed0005079 Sechium edule HOM05D059529 ORTHO05D373401 2.7e-26 122.9 103 61.2
Sed0023496 Sechium edule HOM05D000899 ORTHO05D000710 5.0e-20 102.1 181 39.8
CsaV3_4G034410 Cucumis sativus L. HOM05D000899 ORTHO05D000710 4.4e-16 89.0 168 37.5
Sed0009168 Sechium edule HOM05D000899 ORTHO05D000710 1.8e-14 83.6 84 52.4
MELO3C016761.2 Cucumis melo HOM05D000899 ORTHO05D000710 3.1e-14 82.8 83 53.0
ClCG05G019950 Citrullus lanatus HOM05D000899 ORTHO05D000710 1.6e-13 80.5 83 51.8
CsaV3_4G034400 Cucumis sativus L. HOM05D000899 ORTHO05D000710 2.7e-13 79.7 83 51.8
MELO3C032389.2 Cucumis melo HOM05D000899 ORTHO05D000710 3.8e-12 75.9 84 48.8
CsaV3_4G034390 Cucumis sativus L. HOM05D000899 ORTHO05D000710 5.0e-12 75.5 85 48.2
Sed0016881 Sechium edule HOM05D000899 ORTHO05D000710 1.1e-11 74.3 69 55.1
Sed0022899 Sechium edule HOM05D000899 ORTHO05D000710 1.1e-11 74.3 72 54.2
COL.COLO4_26523 Corchorus olitorius HOM05D000899 ORTHO05D000710 9.4e-11 71.2 79 46.8
MELO3C016762.2 Cucumis melo HOM05D000899 ORTHO05D000710 3.6e-10 69.3 68 52.9
Thecc.08G005400 Theobroma cacao HOM05D000899 ORTHO05D000710 1.5e-08 63.9 86 38.4
Sed0012378 Sechium edule HOM05D000899 ORTHO05D000710 2.6e-08 63.2 97 36.1
CsaV3_4G034420 Cucumis sativus L. HOM05D000899 ORTHO05D000710 4.4e-08 62.4 63 47.6
FvH4_1g16103 Fragaria vesca HOM05D000899 ORTHO05D000710 4.4e-08 62.4 85 40.0
MSTRG.26840 Avicennia marina HOM05D000899 ORTHO05D000710 1.7e-07 60.5 79 43.0
Atru.chr13.709 Acer truncatum HOM05D000899 ORTHO05D000710 3.7e-07 59.3 91 33.0
RcHm_v2.0_Chr2g0105751 Rosa chinensis HOM05D000899 ORTHO05D000710 3.7e-07 59.3 71 40.8
Cfa004027 Carpinus fangiana HOM05D000899 ORTHO05D000710 4.8e-07 58.9 85 41.2
Haze_15392 Corylus avellana HOM05D000899 ORTHO05D000710 4.8e-07 58.9 85 41.2
Nitab4.5_0011027g0010 Nicotiana tabacum HOM05D000899 ORTHO05D000710 6.3e-07 58.5 71 42.3
Oeu062442.2 Olea europaea HOM05D000899 ORTHO05D000710 8.3e-07 58.2 82 43.9
Aa31LG9G13020 Aethionema arabicum HOM05D000899 ORTHO05D000710 1.1e-06 57.8 72 40.3
Atru.chr3.314 Acer truncatum HOM05D000899 ORTHO05D000710 3.1e-06 56.2 85 36.5
Migut.H00427 Erythranthe guttata HOM05D000899 ORTHO05D000710 3.1e-06 56.2 72 40.3
Phvul.002G018400 Phaseolus vulgaris HOM05D000899 ORTHO05D000710 3.1e-06 56.2 75 41.3
Atru.chr13.708 Acer truncatum HOM05D000899 ORTHO05D000710 4.1e-06 55.8 84 34.5
CAN.G660.13 Capsicum annuum HOM05D000899 ORTHO05D000710 4.1e-06 55.8 71 40.8
Dinv29990 Davidia involucrata HOM05D000899 ORTHO05D000710 4.1e-06 55.8 71 39.4
GSVIVG01022125001 Vitis vinifera HOM05D000899 ORTHO05D000710 4.1e-06 55.8 75 40.0
SalBow5G5199 Salvia bowleyana HOM05D000899 ORTHO05D000710 5.4e-06 55.5 91 38.5
Solyc02g090930.3 Solanum lycopersicum HOM05D000899 ORTHO05D000710 5.4e-06 55.5 71 42.3
GSVIVG01022121001 Vitis vinifera HOM05D000899 ORTHO05D000710 5.4e-06 55.5 83 38.6
Thecc.01G057000 Theobroma cacao HOM05D000899 ORTHO05D000710 7.0e-06 55.1 71 43.7
GSVIVG01022123001 Vitis vinifera HOM05D000899 ORTHO05D000710 7.0e-06 55.1 139 29.5
FAN19G2375 Fragaria x ananassa HOM05D000899 ORTHO05D000710 9.1e-06 54.7 75 41.3
Nn1g04833 Nelumbo nucifera HOM05D000899 ORTHO05D000710 9.1e-06 54.7 71 39.4


User provided reference genes

Program Settings