Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0007563 Sechium edule HOM05D003426 ORTHO05D003816 4.2e-165 584.7 319 100.0
ClCG06G012490 Citrullus lanatus HOM05D003426 ORTHO05D003816 8.0e-55 218.4 302 50.3
MELO3C010212.2 Cucumis melo HOM05D003426 ORTHO05D003816 1.0e-41 174.9 314 41.1
Oeu026460.1 Olea europaea HOM05D003426 ORTHO05D003816 7.5e-21 105.5 334 29.6
Cfa020810 Carpinus fangiana HOM05D003426 ORTHO05D003816 2.9e-20 103.6 331 30.2
Eucgr.C00251 Eucalyptus grandis HOM05D003426 ORTHO05D003816 2.4e-19 100.5 273 31.5
HanXRQChr05g0144001 Helianthus annuus HOM05D003426 ORTHO05D003816 2.4e-19 100.5 283 29.3
Gohir.A07G027500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 2.7e-18 97.1 303 33.3
Duzib168G0934 Durio zibethinus HOM05D003426 ORTHO05D003816 3.5e-18 96.7 316 31.3
Gohir.D07G031500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 7.8e-18 95.5 300 32.7
Gorai.001G032900 Gossypium raimondii HOM05D003426 ORTHO05D003816 7.8e-18 95.5 300 32.7
Peaxi162Scf00401g00417 Petunia axillaris HOM05D003426 ORTHO05D003816 3.9e-17 93.2 325 30.5
TAR626G1511 Trochodendron aralioides HOM05D003426 ORTHO05D003816 5.1e-17 92.8 313 30.7
MD15G1151400 Malus domestica HOM05D003426 ORTHO05D003816 2.5e-16 90.5 333 27.6
Aqoxy7G03377 Aquilegia oxysepala HOM05D003426 ORTHO05D003816 4.3e-16 89.7 271 29.9
MSTRG.26266 Avicennia marina HOM05D003426 ORTHO05D003816 4.7e-15 86.3 328 28.0
Hma1.2p1_0028F.1_g017630 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 4.7e-15 86.3 326 27.9
COL.COLO4_18823 Corchorus olitorius HOM05D003426 ORTHO05D003816 1.4e-14 84.7 321 28.7
Glyma.17G072900 Glycine max HOM05D003426 ORTHO05D003816 1.8e-14 84.3 263 30.4
Cc06_g14810 Coffea canephora HOM05D003426 ORTHO05D003816 3.1e-14 83.6 334 29.6
Potri.006G182601 Populus trichocarpa HOM05D003426 ORTHO05D003816 4.0e-14 83.2 337 26.7
Thecc.09G028500 Theobroma cacao HOM05D003426 ORTHO05D003816 8.9e-14 82.0 333 28.8
PSO210G2240 Papaver somniferum HOM05D003426 ORTHO05D003816 2.6e-13 80.5 316 28.2
Sed0021282 Sechium edule HOM05D003426 ORTHO05D003816 2.6e-13 80.5 299 29.8
Prupe.7G264500 Prunus persica HOM05D003426 ORTHO05D003816 5.8e-13 79.3 313 28.8
CAN.G160.49 Capsicum annuum HOM05D003426 ORTHO05D003816 9.9e-13 78.6 358 24.9
Haze_19169 Corylus avellana HOM05D003426 ORTHO05D003816 9.9e-13 78.6 400 25.8
ECA236G2514 Erigeron canadensis HOM05D003426 ORTHO05D003816 9.9e-13 78.6 316 27.2
Oeu021305.2 Olea europaea HOM05D003426 ORTHO05D003816 9.9e-13 78.6 322 26.7
TWI34G0373 Tripterygium wilfordii HOM05D003426 ORTHO05D003816 1.3e-12 78.2 324 28.4
Sopen07g001810 Solanum pennellii HOM05D003426 ORTHO05D003816 1.7e-12 77.8 360 26.1
PGR142G3879 Punica granatum HOM05D003426 ORTHO05D003816 2.9e-12 77.0 315 28.6
SGA_v2.0_scaffold265G46098 Striga asiatica HOM05D003426 ORTHO05D003816 2.9e-12 77.0 268 30.6
Cpa.g.sc46.169 Carica papaya HOM05D003426 ORTHO05D003816 8.4e-12 75.5 324 28.4
FAN28G0527 Fragaria x ananassa HOM05D003426 ORTHO05D003816 8.4e-12 75.5 181 33.1
TAR636G1172 Trochodendron aralioides HOM05D003426 ORTHO05D003816 8.4e-12 75.5 249 31.7
Glyma.17G073000 Glycine max HOM05D003426 ORTHO05D003816 1.4e-11 74.7 286 27.3
PGSC0003DMG400011187 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.4e-11 74.7 366 26.2
Lj9C718T11 Lonicera japonica HOM05D003426 ORTHO05D003816 1.9e-11 74.3 340 25.3
Sc14g0000930 Simmondsia chinensis HOM05D003426 ORTHO05D003816 1.9e-11 74.3 275 27.6
MD02G1006400 Malus domestica HOM05D003426 ORTHO05D003816 2.4e-11 73.9 336 25.6
MSTRG.6152 Avicennia marina HOM05D003426 ORTHO05D003816 3.2e-11 73.6 334 27.5
CANSAT11G1136 Cannabis sativa HOM05D003426 ORTHO05D003816 3.2e-11 73.6 329 25.2
CiPaw.15G166800 Carya illinoinensis HOM05D003426 ORTHO05D003816 4.1e-11 73.2 348 26.7
Lj7P460T26 Lonicera japonica HOM05D003426 ORTHO05D003816 5.4e-11 72.8 157 35.0
Actinidia23556 Actinidia chinensis HOM05D003426 ORTHO05D003816 9.2e-11 72.0 327 26.6
Solyc07g005700.3 Solanum lycopersicum HOM05D003426 ORTHO05D003816 1.2e-10 71.6 360 25.6
AUR62025323 Chenopodium quinoa HOM05D003426 ORTHO05D003816 3.5e-10 70.1 326 25.8
PSO210G1729 Papaver somniferum HOM05D003426 ORTHO05D003816 3.5e-10 70.1 323 25.1
vmacro16795 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 4.6e-10 69.7 314 26.4
Lsat_1_v5_gn_8_63641 Lactuca sativa HOM05D003426 ORTHO05D003816 6.0e-10 69.3 321 27.1
MD17G1259500 Malus domestica HOM05D003426 ORTHO05D003816 6.0e-10 69.3 363 26.4
AUR62028339 Chenopodium quinoa HOM05D003426 ORTHO05D003816 1.3e-09 68.2 326 26.4
DCAR_019401 Daucus carota HOM05D003426 ORTHO05D003816 1.3e-09 68.2 191 34.0
PGSC0003DMG400036381 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.3e-09 68.2 288 27.1
Dinv42844 Davidia involucrata HOM05D003426 ORTHO05D003816 1.7e-09 67.8 244 28.7
Thhalv10000536m.g Eutrema salsugineum HOM05D012895 ORTHO05D014428 1.7e-09 67.8 292 26.4
Ca_21135_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 6.6e-09 65.9 349 25.8
Ca_21137_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 6.6e-09 65.9 349 25.8
Glyma.17G184200 Glycine max HOM05D003426 ORTHO05D003816 6.6e-09 65.9 250 25.6
Hund08921 Selenicereus undatus HOM05D003426 ORTHO05D003816 1.5e-08 64.7 222 29.3
Dinv43256 Davidia involucrata HOM05D003426 ORTHO05D003816 2.5e-08 63.9 344 25.6
Lsat_1_v5_gn_5_90301 Lactuca sativa HOM05D003426 ORTHO05D003816 2.5e-08 63.9 100 35.0
Manes.14G144800 Manihot esculenta HOM05D003426 ORTHO05D003816 2.5e-08 63.9 335 27.2
FvH4_1g00800 Fragaria vesca HOM05D003426 ORTHO05D003816 3.3e-08 63.5 191 30.4
Sc18g0002970 Simmondsia chinensis HOM05D003426 ORTHO05D003816 3.3e-08 63.5 176 30.1
CARHR184730 Cardamine hirsuta HOM05D012895 ORTHO05D014428 4.3e-08 63.2 275 25.5
EL10Ac8g18943 Beta vulgaris HOM05D003426 ORTHO05D003816 7.3e-08 62.4 328 25.6
Hma1.2p1_2680F.1_g326790 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 7.3e-08 62.4 190 30.0
Glyma.02G205001 Glycine max HOM05D003426 ORTHO05D003816 9.6e-08 62.0 283 25.8
MBI15_g18232_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 2.1e-07 60.8 287 26.5
GSVIVG01007924001 Vitis vinifera HOM05D005220 ORTHO05D006082 2.8e-07 60.5 99 36.4
CiPaw.16G108300 Carya illinoinensis HOM05D003426 ORTHO05D003816 3.6e-07 60.1 377 23.9
Atru.chr7.23 Acer truncatum HOM05D003426 ORTHO05D003816 4.7e-07 59.7 325 27.1
QL02p018769 Quercus lobata HOM05D003426 ORTHO05D003816 4.7e-07 59.7 166 28.9
arahy.Tifrunner.gnm1.ann1.H6N2T4 Arachis hypogaea HOM05D003426 ORTHO05D003816 8.1e-07 58.9 337 25.2
arahy.Tifrunner.gnm1.ann1.N5DK6E Arachis hypogaea HOM05D003426 ORTHO05D003816 8.1e-07 58.9 327 23.2
Manes.06G035400 Manihot esculenta HOM05D003426 ORTHO05D003816 8.1e-07 58.9 332 25.0
Hund02984 Selenicereus undatus HOM05D016866 ORTHO05D015160 8.1e-07 58.9 144 27.8
TPR.G12226 Trifolium pratense HOM05D005220 ORTHO05D006082 1.1e-06 58.5 110 34.5
Psat7g133400 Pisum sativum HOM05D005220 ORTHO05D006082 1.4e-06 58.2 119 30.3
FAN26G0769 Fragaria x ananassa HOM05D003426 ORTHO05D003816 1.8e-06 57.8 194 28.9
HPP92_018545 Vanilla planifolia HOM05D004872 ORTHO05D003816 1.8e-06 57.8 267 24.3
Sabra06G0139100 Salix brachista HOM05D003426 ORTHO05D003816 2.4e-06 57.4 166 28.9
Nn2g12424 Nelumbo nucifera HOM05D003426 ORTHO05D003816 4.0e-06 56.6 215 29.8
Psat4g009920 Pisum sativum HOM05D003426 ORTHO05D003816 4.0e-06 56.6 197 29.9
Medtr3g023750 Medicago truncatula HOM05D005220 ORTHO05D006082 8.9e-06 55.5 132 31.8
PSO561G0041 Papaver somniferum HOM05D003426 ORTHO05D003816 8.9e-06 55.5 94 34.0
Rhsim11G0141100 Rhododendron simsii HOM05D000650 ORTHO05D007302 8.9e-06 55.5 156 28.2


User provided reference genes

Program Settings