Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0007439 Sechium edule HOM05D007446 ORTHO05D009376 4.7e-32 140.6 71 100.0
ClCG01G020420 Citrullus lanatus HOM05D007446 ORTHO05D009376 9.8e-30 132.9 71 95.8
MELO3C007921.2 Cucumis melo HOM05D007446 ORTHO05D009376 2.9e-29 131.3 71 94.4
CsaV3_6G047300 Cucumis sativus L. HOM05D007446 ORTHO05D009376 6.4e-29 130.2 71 93.0
Dinv40111 Davidia involucrata HOM05D007446 ORTHO05D009376 3.5e-27 124.4 69 89.9
Cfa006995 Carpinus fangiana HOM05D007446 ORTHO05D009376 7.8e-27 123.2 71 87.3
Haze_03737 Corylus avellana HOM05D007446 ORTHO05D009376 7.8e-27 123.2 71 87.3
Rhsim10G0209600 Rhododendron simsii HOM05D007446 ORTHO05D009376 1.0e-26 122.9 71 85.9
GSVIVG01018747001 Vitis vinifera HOM05D007446 ORTHO05D009376 5.0e-26 120.6 68 88.2
CiPaw.08G130000 Carya illinoinensis HOM05D007446 ORTHO05D009376 8.6e-26 119.8 69 89.9
TWI09G0145 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 1.1e-25 119.4 71 84.5
vmacro22147 Vaccinium macrocarpon HOM05D007446 ORTHO05D009376 1.1e-25 119.4 70 85.7
Actinidia17426 Actinidia chinensis HOM05D007446 ORTHO05D009376 1.5e-25 119.0 71 84.5
MD02G1128000 Malus domestica HOM05D007446 ORTHO05D009376 1.9e-25 118.6 68 85.3
Prupe.7G170900 Prunus persica HOM05D007446 ORTHO05D009376 1.9e-25 118.6 68 85.3
arahy.Tifrunner.gnm1.ann1.786IJB Arachis hypogaea HOM05D007446 ORTHO05D009376 2.5e-25 118.2 71 85.9
arahy.Tifrunner.gnm1.ann1.RW313X Arachis hypogaea HOM05D007446 ORTHO05D009376 2.5e-25 118.2 71 85.9
HanXRQChr09g0256761 Helianthus annuus HOM05D007446 ORTHO05D009376 2.5e-25 118.2 71 83.1
Manes.02G106000 Manihot esculenta HOM05D007446 ORTHO05D009376 3.3e-25 117.9 71 84.5
ECA232G4023 Erigeron canadensis HOM05D007446 ORTHO05D009376 5.6e-25 117.1 70 84.3
QL06p051006 Quercus lobata HOM05D007446 ORTHO05D009376 5.6e-25 117.1 65 87.7
SalBow3G1068 Salvia bowleyana HOM05D007446 ORTHO05D009376 5.6e-25 117.1 71 80.3
Thecc.01G015400 Theobroma cacao HOM05D007446 ORTHO05D009376 5.6e-25 117.1 70 81.4
Potri.005G111900 Populus trichocarpa HOM05D007446 ORTHO05D009376 1.2e-24 115.9 71 84.5
TWI73G1016 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 1.6e-24 115.5 71 80.3
Atru.chr3.842 Acer truncatum HOM05D007446 ORTHO05D009376 2.8e-24 114.8 69 82.6
Sabra05G0091700 Salix brachista HOM05D007446 ORTHO05D009376 3.6e-24 114.4 71 83.1
Hma1.2p1_0869F.1_g230750 Hydrangea macrophylla HOM05D007446 ORTHO05D009376 4.7e-24 114.0 66 84.8
Lalb_Chr05g0229761 Lupinus albus HOM05D007446 ORTHO05D009376 6.2e-24 113.6 71 78.9
Hund14058 Selenicereus undatus HOM05D007446 ORTHO05D009376 8.0e-24 113.2 71 77.5
CSS0009543 Camellia sinensis var. sinensis HOM05D007446 ORTHO05D009376 1.1e-23 112.8 71 83.1
CAN.G1817.7 Capsicum annuum HOM05D007446 ORTHO05D009376 1.1e-23 112.8 70 77.1
Duzib264G0432 Durio zibethinus HOM05D007446 ORTHO05D009376 1.4e-23 112.5 63 87.3
Nitab4.5_0001658g0040 Nicotiana tabacum HOM05D007446 ORTHO05D009376 1.4e-23 112.5 68 82.4
Cpa.g.sc6.279 Carica papaya HOM05D007446 ORTHO05D009376 1.8e-23 112.1 70 78.6
EL10Ac6g15495 Beta vulgaris HOM05D007446 ORTHO05D009376 2.3e-23 111.7 71 80.3
Lj4g0002006 Lotus japonicus HOM05D007446 ORTHO05D009376 2.3e-23 111.7 71 77.5
FvH4_1g11510 Fragaria vesca HOM05D007446 ORTHO05D009376 3.1e-23 111.3 65 83.1
FAN26G2670 Fragaria x ananassa HOM05D007446 ORTHO05D009376 3.1e-23 111.3 65 83.1
RcHm_v2.0_Chr2g0099131 Rosa chinensis HOM05D007446 ORTHO05D009376 3.1e-23 111.3 65 83.1
CAN.G1274.24 Capsicum annuum HOM05D007446 ORTHO05D009376 5.2e-23 110.5 68 79.4
Cc07_g11000 Coffea canephora HOM05D007446 ORTHO05D009376 5.2e-23 110.5 71 73.2
Gohir.D11G181100 Gossypium hirsutum HOM05D007446 ORTHO05D009376 6.8e-23 110.2 63 84.1
Gorai.007G193000 Gossypium raimondii HOM05D007446 ORTHO05D009376 6.8e-23 110.2 63 84.1
Sopen02g028430 Solanum pennellii HOM05D007446 ORTHO05D009376 6.8e-23 110.2 68 79.4
Nitab4.5_0001892g0060 Nicotiana tabacum HOM05D007446 ORTHO05D009376 8.9e-23 109.8 68 80.9
PGSC0003DMG400003579 Solanum tuberosum HOM05D007446 ORTHO05D009376 8.9e-23 109.8 68 79.4
FAN23G0535 Fragaria x ananassa HOM05D000971 ORTHO05D000901 1.2e-22 109.4 62 83.9
BraA01t00259Z Brassica rapa HOM05D007446 ORTHO05D009376 1.5e-22 109.0 72 77.8
AUR62003348 Chenopodium quinoa HOM05D007446 ORTHO05D009376 1.5e-22 109.0 71 81.7
Eucgr.J02461 Eucalyptus grandis HOM05D007446 ORTHO05D009376 1.5e-22 109.0 69 81.2
Peaxi162Scf00328g00716 Petunia axillaris HOM05D007446 ORTHO05D009376 1.5e-22 109.0 68 79.4
Glyma.16G124800 Glycine max HOM05D007446 ORTHO05D009376 2.0e-22 108.6 71 76.1
Ciclev10026855m.g Citrus clementina HOM05D007446 ORTHO05D009376 2.6e-22 108.2 71 71.8
AUR62029488 Chenopodium quinoa HOM05D007446 ORTHO05D009376 4.4e-22 107.5 71 80.3
AUR62043833 Chenopodium quinoa HOM05D007446 ORTHO05D009376 4.4e-22 107.5 71 80.3
Solyc02g083650.3 Solanum lycopersicum HOM05D007446 ORTHO05D009376 5.8e-22 107.1 68 77.9
PGR119G1403 Punica granatum HOM05D007446 ORTHO05D009376 7.5e-22 106.7 69 78.3
A01p02730 Brassica napus HOM05D007446 ORTHO05D009376 9.8e-22 106.3 72 76.4
C01p03030 Brassica napus HOM05D007446 ORTHO05D009376 9.8e-22 106.3 72 76.4
BolC1t00289H Brassica oleracea HOM05D007446 ORTHO05D009376 9.8e-22 106.3 72 76.4
MD15G1243200 Malus domestica HOM05D007446 ORTHO05D009376 1.3e-21 105.9 60 86.7
Sp7g33750 Schrenkiella parvula HOM05D007446 ORTHO05D009376 1.3e-21 105.9 72 76.4
AL7G15070 Arabidopsis lyrata HOM05D007446 ORTHO05D009376 1.7e-21 105.5 72 76.4
AT4G35980 Arabidopsis thaliana HOM05D007446 ORTHO05D009376 1.7e-21 105.5 71 74.6
Carub.0007s0425 Capsella rubella HOM05D007446 ORTHO05D009376 1.7e-21 105.5 72 76.4
Lsat_1_v5_gn_4_145721 Lactuca sativa HOM05D007446 ORTHO05D009376 2.2e-21 105.1 68 79.4
Thhalv10026680m.g Eutrema salsugineum HOM05D007446 ORTHO05D009376 2.9e-21 104.8 72 75.0
BcaNung00774 Brassica carinata HOM05D007446 ORTHO05D009376 3.7e-21 104.4 72 75.0
Aa31LG6G12930 Aethionema arabicum HOM05D007446 ORTHO05D009376 4.9e-21 104.0 72 76.4
Oeu007438.1 Olea europaea HOM05D007446 ORTHO05D009376 1.9e-20 102.1 63 82.5
SGA_v2.0_scaffold74G24537 Striga asiatica HOM05D007446 ORTHO05D009376 1.9e-20 102.1 71 70.4
THA.LOC104804270 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 1.9e-20 102.1 72 75.0
CANSAT25G1207 Cannabis sativa HOM05D007446 ORTHO05D009376 3.2e-20 101.3 74 73.0
Nn7g37082 Nelumbo nucifera HOM05D007446 ORTHO05D009376 1.6e-19 99.0 71 70.4
Ah.03g149050 Amaranthus hybridus HOM05D007446 ORTHO05D009376 2.1e-19 98.6 71 71.8
Gohir.A11G174000 Gossypium hirsutum HOM05D007446 ORTHO05D009376 2.1e-19 98.6 55 87.3
Phvul.003G264800 Phaseolus vulgaris HOM05D007446 ORTHO05D009376 3.5e-19 97.8 71 69.0
Migut.H02175 Erythranthe guttata HOM05D007446 ORTHO05D009376 7.8e-19 96.7 71 71.8
TPR.G19502 Trifolium pratense HOM05D007446 ORTHO05D009376 7.8e-19 96.7 72 70.8
Medtr8g075290 Medicago truncatula HOM05D007446 ORTHO05D009376 1.0e-18 96.3 72 69.4
Oeu054756.1 Olea europaea HOM05D007446 ORTHO05D009376 1.0e-18 96.3 61 78.7
FAN28G0109 Fragaria x ananassa HOM05D000971 ORTHO05D000901 1.3e-18 95.9 55 83.6
TAR636G2489 Trochodendron aralioides HOM05D007446 ORTHO05D009376 1.3e-18 95.9 69 68.1
FAN19G2392 Fragaria x ananassa HOM05D000971 ORTHO05D000901 6.6e-18 93.6 53 83.0
Psat4g101880 Pisum sativum HOM05D007446 ORTHO05D009376 8.6e-18 93.2 68 67.6
Gorai.007G317400 Gossypium raimondii HOM05D007446 ORTHO05D009376 5.6e-17 90.5 63 73.0
Psat4g101720 Pisum sativum HOM05D007446 ORTHO05D009376 9.5e-17 89.7 68 66.2
TPR.G25793 Trifolium pratense HOM05D000002 ORTHO05D000001 9.5e-17 89.7 66 69.7
THA.LOC109115992 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 1.2e-16 89.4 71 66.2
Gohir.D11G294266 Gossypium hirsutum HOM05D007446 ORTHO05D009376 2.1e-16 88.6 63 71.4
DCAR_023140 Daucus carota HOM05D000372 ORTHO05D004502 4.0e-15 84.3 70 67.1
Sc07g0001100 Simmondsia chinensis HOM05D007446 ORTHO05D009376 8.9e-15 83.2 55 72.7
PGSC0003DMG400022557 Solanum tuberosum HOM05D007446 ORTHO05D009376 1.2e-14 82.8 63 69.8
Sc07g0001150 Simmondsia chinensis HOM05D007446 ORTHO05D009376 3.4e-14 81.3 55 72.7
unitig_899.g14718 Utricularia gibba HOM05D007446 ORTHO05D009376 5.8e-14 80.5 67 62.7
DCAR_011601 Daucus carota HOM05D007446 ORTHO05D009376 1.3e-13 79.3 70 64.3
Os05g0352800 Oryza sativa ssp. japonica HOM05D007446 ORTHO05D009376 4.9e-13 77.4 60 63.3
ATR0681G038 Amborella trichopoda HOM05D007446 ORTHO05D009376 8.3e-13 76.6 65 56.9
HPP92_012021 Vanilla planifolia HOM05D007446 ORTHO05D009376 2.1e-11 72.0 67 55.2
Zm00001eb428230 Zea mays HOM05D007446 ORTHO05D009376 7.8e-11 70.1 59 64.4
Glyma.02G046300 Glycine max HOM05D007446 ORTHO05D009376 3.0e-10 68.2 39 76.9
Actinidia22956 Actinidia chinensis HOM05D007446 ORTHO05D009376 5.1e-10 67.4 44 84.1
Psat0s2733g0120 Pisum sativum HOM05D007446 ORTHO05D009376 6.6e-10 67.0 72 52.8
SalBow3G4512 Salvia bowleyana HOM05D007446 ORTHO05D009376 3.1e-07 58.2 39 69.2


User provided reference genes

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