Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0007395 Sechium edule HOM05D007571 ORTHO05D009439 1.7e-62 242.7 138 100.0
MELO3C018528.2 Cucumis melo HOM05D007571 ORTHO05D009439 7.5e-42 174.1 139 77.0
CsaV3_7G007730 Cucumis sativus L. HOM05D007571 ORTHO05D009439 1.3e-41 173.3 141 75.9
Haze_10272 Corylus avellana HOM05D007571 ORTHO05D009439 8.0e-36 154.1 139 69.1
ClCG02G007100 Citrullus lanatus HOM05D007571 ORTHO05D009439 1.8e-35 152.9 142 70.4
Ciclev10029547m.g Citrus clementina HOM05D007571 ORTHO05D009439 4.0e-35 151.8 146 65.8
QL11p029955 Quercus lobata HOM05D007571 ORTHO05D009439 2.6e-34 149.1 141 66.0
MD10G1108300 Malus domestica HOM05D007571 ORTHO05D009439 1.7e-33 146.4 142 66.2
Potri.001G292000 Populus trichocarpa HOM05D007571 ORTHO05D009439 3.7e-33 145.2 145 62.1
RcHm_v2.0_Chr6g0252541 Rosa chinensis HOM05D007571 ORTHO05D009439 3.7e-33 145.2 141 64.5
Thecc.02G118900 Theobroma cacao HOM05D007571 ORTHO05D009439 6.3e-33 144.4 157 60.5
Atru.chr5.2324 Acer truncatum HOM05D007571 ORTHO05D009439 8.3e-33 144.1 140 65.7
Prupe.8G147200 Prunus persica HOM05D007571 ORTHO05D009439 1.4e-32 143.3 141 64.5
TWI59G0511 Tripterygium wilfordii HOM05D007571 ORTHO05D009439 2.4e-32 142.5 142 60.6
Carub.0001s3916 Capsella rubella HOM05D007571 ORTHO05D009439 5.4e-32 141.4 140 64.3
Glyma.10G256000 Glycine max HOM05D007571 ORTHO05D009439 7.0e-32 141.0 142 62.0
AL1G57530 Arabidopsis lyrata HOM05D007571 ORTHO05D009439 9.1e-32 140.6 140 63.6
AT1G49975 Arabidopsis thaliana HOM05D007571 ORTHO05D009439 1.6e-31 139.8 140 63.6
Duzib052G0547 Durio zibethinus HOM05D007571 ORTHO05D009439 1.6e-31 139.8 155 60.0
Thhalv10011862m.g Eutrema salsugineum HOM05D007571 ORTHO05D009439 1.6e-31 139.8 140 62.9
FvH4_2g03581 Fragaria vesca HOM05D007571 ORTHO05D009439 2.0e-31 139.4 141 61.7
FAN20G2923 Fragaria x ananassa HOM05D007571 ORTHO05D009439 2.7e-31 139.0 141 61.0
Gohir.A12G018900 Gossypium hirsutum HOM05D007571 ORTHO05D009439 3.5e-31 138.7 156 59.0
Gohir.D12G019350 Gossypium hirsutum HOM05D007571 ORTHO05D009439 5.9e-31 137.9 156 58.3
Sp1g36830 Schrenkiella parvula HOM05D007571 ORTHO05D009439 5.9e-31 137.9 140 62.1
Medtr1g106075 Medicago truncatula HOM05D007571 ORTHO05D009439 1.3e-30 136.7 140 62.9
Lalb_Chr21g0308001 Lupinus albus HOM05D007571 ORTHO05D009439 2.3e-30 136.0 139 61.9
Eucgr.G01203 Eucalyptus grandis HOM05D007571 ORTHO05D009439 6.6e-30 134.4 144 59.0
THA.LOC104825387 Tarenaya hassleriana HOM05D007571 ORTHO05D009439 1.1e-29 133.7 142 60.6
PGR042G0328 Punica granatum HOM05D007571 ORTHO05D009439 1.9e-29 132.9 157 59.2
TPR.G21146 Trifolium pratense HOM05D007571 ORTHO05D009439 1.9e-29 132.9 140 59.3
Lj5g0013426 Lotus japonicus HOM05D007571 ORTHO05D009439 6.1e-28 127.9 133 61.7
COL.COLO4_32496 Corchorus olitorius HOM05D007571 ORTHO05D009439 1.4e-27 126.7 149 59.1
Medtr3g008630 Medicago truncatula HOM05D007571 ORTHO05D009439 1.4e-27 126.7 140 59.3
BcaB07g33447 Brassica carinata HOM05D007571 ORTHO05D009439 6.8e-27 124.4 140 58.6
A06p03470 Brassica napus HOM05D007571 ORTHO05D009439 6.8e-27 124.4 140 58.6
BraA06t23555Z Brassica rapa HOM05D007571 ORTHO05D009439 6.8e-27 124.4 140 58.6
arahy.Tifrunner.gnm1.ann1.A1M8SQ Arachis hypogaea HOM05D007571 ORTHO05D009439 8.9e-27 124.0 136 55.1
C06p04720 Brassica napus HOM05D007571 ORTHO05D009439 8.9e-27 124.0 140 58.6
CANSAT25G0272 Cannabis sativa HOM05D007571 ORTHO05D009439 8.9e-27 124.0 142 56.3
CANSAT25G2750 Cannabis sativa HOM05D007571 ORTHO05D009439 8.9e-27 124.0 142 56.3
Sabra16G0182000 Salix brachista HOM05D007571 ORTHO05D009439 1.2e-26 123.6 182 46.7
arahy.Tifrunner.gnm1.ann1.I40GDJ Arachis hypogaea HOM05D007571 ORTHO05D009439 3.4e-26 122.1 136 54.4
GSVIVG01037807001 Vitis vinifera HOM05D007571 ORTHO05D009439 3.4e-26 122.1 125 60.8
Phvul.007G046800 Phaseolus vulgaris HOM05D007571 ORTHO05D009439 9.8e-26 120.6 133 56.4
BcaC08g43171 Brassica carinata HOM05D007571 ORTHO05D009439 3.7e-25 118.6 140 57.9
VMungo0720G0585 Vigna mungo HOM05D007571 ORTHO05D009439 3.7e-25 118.6 136 56.6
CSS0048413 Camellia sinensis var. sinensis HOM05D007571 ORTHO05D009439 6.3e-25 117.9 136 56.6
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 8.3e-25 117.5 145 57.2
Actinidia27996 Actinidia chinensis HOM05D007571 ORTHO05D009439 2.4e-24 115.9 129 57.4
Actinidia04391 Actinidia chinensis HOM05D007571 ORTHO05D009439 4.1e-24 115.2 129 56.6
TAR628G1270 Trochodendron aralioides HOM05D007571 ORTHO05D009439 7.0e-24 114.4 133 57.1
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.2e-23 113.6 147 55.1
Nn6g34507 Nelumbo nucifera HOM05D007571 ORTHO05D009439 1.3e-22 110.2 98 64.3
vmacro19538 Vaccinium macrocarpon HOM05D007571 ORTHO05D009439 1.7e-22 109.8 94 67.0
Rhsim05G0092500 Rhododendron simsii HOM05D007571 ORTHO05D009439 2.3e-22 109.4 131 52.7
Cc02_g09420 Coffea canephora HOM05D007571 ORTHO05D009439 2.5e-21 105.9 130 54.6
Dinv15820 Davidia involucrata HOM05D007571 ORTHO05D009439 3.3e-21 105.5 104 64.4
BolC6t35600H Brassica oleracea HOM05D007571 ORTHO05D009439 1.6e-20 103.2 169 47.9
PSO675G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 4.7e-20 101.7 134 47.0
Aqoxy6G02559 Aquilegia oxysepala HOM05D007571 ORTHO05D009439 6.1e-20 101.3 135 48.9
ECA238G3778 Erigeron canadensis HOM05D007571 ORTHO05D009439 6.1e-20 101.3 93 60.2
Peaxi162Scf00519g00423 Petunia axillaris HOM05D007571 ORTHO05D009439 6.1e-20 101.3 133 51.9
HanXRQChr02g0053531 Helianthus annuus HOM05D007571 ORTHO05D009439 8.0e-20 100.9 93 61.3
EL10Ac9g22184 Beta vulgaris HOM05D007571 ORTHO05D009439 1.0e-19 100.5 122 54.1
DCAR_028375 Daucus carota HOM05D007571 ORTHO05D009439 1.0e-19 100.5 129 49.6
CAN.G1433.5 Capsicum annuum HOM05D007571 ORTHO05D009439 1.4e-19 100.1 133 50.4
PSO541G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 1.8e-19 99.8 133 49.6
Hund06510 Selenicereus undatus HOM05D007571 ORTHO05D009439 3.1e-19 99.0 133 47.4
Sc05g0005590 Simmondsia chinensis HOM05D007571 ORTHO05D009439 3.1e-19 99.0 71 71.8
Ah.01g007010 Amaranthus hybridus HOM05D007571 ORTHO05D009439 4.0e-19 98.6 94 60.6
Migut.F01585 Erythranthe guttata HOM05D007571 ORTHO05D009439 4.0e-19 98.6 68 69.1
Nitab4.5_0017347g0020 Nicotiana tabacum HOM05D007571 ORTHO05D009439 8.9e-19 97.4 130 52.3
Oeu024805.1 Olea europaea HOM05D007571 ORTHO05D009439 8.9e-19 97.4 129 49.6
Nitab4.5_0000687g0180 Nicotiana tabacum HOM05D007571 ORTHO05D009439 1.2e-18 97.1 130 52.3
MBI16_g39621_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 3.4e-18 95.5 134 48.5
MBI16_g43666_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 3.4e-18 95.5 134 48.5
MSTRG.417 Avicennia marina HOM05D007571 ORTHO05D009439 4.4e-18 95.1 129 48.8
Lsat_1_v5_gn_2_105800 Lactuca sativa HOM05D007571 ORTHO05D009439 4.4e-18 95.1 137 45.3
Solyc05g150152.1 Solanum lycopersicum HOM05D007571 ORTHO05D009439 5.8e-18 94.7 113 53.1
CARHR040010 Cardamine hirsuta HOM05D007571 ORTHO05D009439 7.5e-18 94.4 65 75.4
SalBow6G2573 Salvia bowleyana HOM05D007571 ORTHO05D009439 7.5e-18 94.4 69 71.0
Sopen05g033610 Solanum pennellii HOM05D007571 ORTHO05D009439 1.3e-17 93.6 113 52.2
AagrBONN_evm.TU.Sc2ySwM_228.3762 Anthoceros agrestis HOM05D007571 ORTHO05D009439 1.7e-17 93.2 108 52.8
CiPaw.05G019300 Carya illinoinensis HOM05D000470 ORTHO05D000348 3.7e-17 92.0 60 78.3
SEGI_38446 Sequoiadendron giganteum HOM05D007571 ORTHO05D009439 1.4e-16 90.1 71 63.4
Os03g0731100 Oryza sativa ssp. japonica HOM05D007571 ORTHO05D009439 1.9e-16 89.7 104 54.8
AUR62030860 Chenopodium quinoa HOM05D007571 ORTHO05D009439 9.2e-16 87.4 138 44.9
SGA_v2.0_scaffold62G21311 Striga asiatica HOM05D007002 ORTHO05D008602 1.2e-15 87.0 57 75.4
ATR0739G046 Amborella trichopoda HOM05D007571 ORTHO05D009439 1.6e-15 86.7 63 74.6
PGSC0003DMG400023397 Solanum tuberosum HOM05D007571 ORTHO05D009439 7.8e-15 84.3 59 71.2
CDE04G1832 Ceratophyllum demersum HOM05D007571 ORTHO05D009439 3.9e-14 82.0 118 45.8
Zm00001eb056210 Zea mays HOM05D007571 ORTHO05D009439 8.6e-14 80.9 101 52.5
Manes.07G054000 Manihot esculenta HOM05D007571 ORTHO05D009439 1.1e-13 80.5 95 60.0
CBR_g6736 Chara braunii HOM05D007571 ORTHO05D009439 3.6e-12 75.5 93 45.2
Pp3c17_8360 Physcomitrium patens HOM05D007571 ORTHO05D009439 3.6e-12 75.5 108 45.4
Aa31LG10G4150 Aethionema arabicum HOM05D007571 ORTHO05D009439 5.2e-11 71.6 96 50.0
Potri.009G086400 Populus trichocarpa HOM05D007571 ORTHO05D009439 4.4e-10 68.6 91 53.8
SalBow6G2452 Salvia bowleyana HOM05D007571 ORTHO05D009439 4.1e-08 62.0 46 67.4
SMO117G0287 Selaginella moellendorffii HOM05D028851 ORTHO05D009439 3.9e-06 55.5 60 48.3


User provided reference genes

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