Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0007337 Sechium edule HOM05D007426 ORTHO05D009167 1.2e-114 418.3 210 100.0
ClCG04G001050 Citrullus lanatus HOM05D007426 ORTHO05D009167 2.7e-90 337.4 211 80.6
MELO3C012287.2 Cucumis melo HOM05D007426 ORTHO05D009167 6.6e-89 332.8 211 78.7
CsaV3_5G034750 Cucumis sativus L. HOM05D007426 ORTHO05D009167 6.9e-86 322.8 211 77.3
QL01p003061 Quercus lobata HOM05D007426 ORTHO05D009167 3.2e-75 287.3 218 64.7
Manes.06G063200 Manihot esculenta HOM05D007426 ORTHO05D009167 4.0e-70 270.4 213 64.8
CiPaw.05G245100 Carya illinoinensis HOM05D007426 ORTHO05D009167 2.0e-69 268.1 212 62.7
Haze_00680 Corylus avellana HOM05D007426 ORTHO05D009167 1.6e-66 258.5 210 61.4
Duzib248G0356 Durio zibethinus HOM05D007426 ORTHO05D009167 1.0e-65 255.8 216 63.0
MD13G1032800 Malus domestica HOM05D007426 ORTHO05D009167 4.8e-63 246.9 214 60.7
MD16G1034800 Malus domestica HOM05D007426 ORTHO05D009167 1.8e-62 245.0 217 59.9
Dinv04907 Davidia involucrata HOM05D007426 ORTHO05D009167 1.7e-60 238.4 227 57.3
Ciclev10017504m.g Citrus clementina HOM05D007426 ORTHO05D009167 2.9e-60 237.7 218 56.4
Gohir.D02G172600 Gossypium hirsutum HOM05D007426 ORTHO05D009167 8.4e-60 236.1 229 59.4
Gorai.005G194300 Gossypium raimondii HOM05D007426 ORTHO05D009167 8.4e-60 236.1 228 59.2
CSS0006507 Camellia sinensis var. sinensis HOM05D007426 ORTHO05D009167 2.5e-59 234.6 223 57.4
Gohir.A03G149700 Gossypium hirsutum HOM05D007426 ORTHO05D009167 7.1e-59 233.0 223 58.7
TAR629G2850 Trochodendron aralioides HOM05D007426 ORTHO05D009167 7.1e-59 233.0 213 60.6
GSVIVG01011807001 Vitis vinifera HOM05D000798 ORTHO05D000659 1.8e-57 228.4 211 57.3
Hma1.2p1_0882F.1_g232200 Hydrangea macrophylla HOM05D007426 ORTHO05D009167 3.3e-56 224.2 221 57.5
COL.COLO4_35570 Corchorus olitorius HOM05D002230 ORTHO05D002441 5.7e-56 223.4 183 61.7
Atru.chr11.331 Acer truncatum HOM05D007426 ORTHO05D009167 1.3e-55 222.2 211 54.0
Nn3g17999 Nelumbo nucifera HOM05D007426 ORTHO05D009167 1.1e-54 219.2 217 55.3
CANSAT01G1275 Cannabis sativa HOM05D007426 ORTHO05D009167 4.1e-54 217.2 214 55.1
TWI79G0655 Tripterygium wilfordii HOM05D007426 ORTHO05D009167 2.6e-53 214.5 206 57.8
Cpa.g.sc65.89 Carica papaya HOM05D007426 ORTHO05D009167 1.0e-52 212.6 216 51.9
Lj3A877T95 Lonicera japonica HOM05D007426 ORTHO05D009167 3.8e-52 210.7 231 54.1
RcHm_v2.0_Chr4g0434041 Rosa chinensis HOM05D007426 ORTHO05D009167 1.9e-51 208.4 213 56.8
Aqoxy3G03989 Aquilegia oxysepala HOM05D007426 ORTHO05D009167 2.5e-51 208.0 213 52.1
Sc11g0003960 Simmondsia chinensis HOM05D007426 ORTHO05D009167 2.0e-48 198.4 196 51.5
THA.LOC104821759 Tarenaya hassleriana HOM05D007426 ORTHO05D009167 4.8e-47 193.7 215 49.3
Actinidia34749 Actinidia chinensis HOM05D007426 ORTHO05D009167 1.8e-46 191.8 212 50.9
Rhsim09G0137400 Rhododendron simsii HOM05D007426 ORTHO05D009167 6.9e-46 189.9 222 50.0
vmacro10360 Vaccinium macrocarpon HOM05D007426 ORTHO05D009167 2.6e-45 188.0 222 49.5
Eucgr.G00774 Eucalyptus grandis HOM05D007426 ORTHO05D009167 3.8e-44 184.1 215 47.0
PGR119G0474 Punica granatum HOM05D007426 ORTHO05D009167 6.1e-42 176.8 213 49.3
MSTRG.13563 Avicennia marina HOM05D007426 ORTHO05D009167 1.8e-41 175.3 238 45.4
Aa31LG7G6970 Aethionema arabicum HOM05D007426 ORTHO05D009167 5.1e-41 173.7 212 44.8
CDE04G0172 Ceratophyllum demersum HOM05D007426 ORTHO05D009167 2.0e-40 171.8 193 50.8
FAN12G1804 Fragaria x ananassa HOM05D007426 ORTHO05D009167 3.3e-40 171.0 212 48.1
Cc11_g09290 Coffea canephora HOM05D007426 ORTHO05D009167 5.7e-40 170.2 234 44.9
FAN12G0928 Fragaria x ananassa HOM05D007426 ORTHO05D009167 7.4e-40 169.9 214 47.7
Sopen05g004400 Solanum pennellii HOM05D007426 ORTHO05D009167 2.2e-39 168.3 166 51.8
Solyc05g008560.1 Solanum lycopersicum HOM05D007426 ORTHO05D009167 8.2e-39 166.4 234 45.3
PGSC0003DMG402030517 Solanum tuberosum HOM05D007426 ORTHO05D009167 1.4e-38 165.6 166 51.8
Nitab4.5_0000350g0090 Nicotiana tabacum HOM05D007426 ORTHO05D009167 3.1e-38 164.5 162 50.6
Lsat_1_v5_gn_4_15701 Lactuca sativa HOM05D007426 ORTHO05D009167 7.0e-38 163.3 227 43.2
AL1G36520 Arabidopsis lyrata HOM05D007426 ORTHO05D009167 9.1e-38 162.9 212 43.4
CARHR023340 Cardamine hirsuta HOM05D007426 ORTHO05D009167 9.1e-38 162.9 216 44.0
DCAR_023623 Daucus carota HOM05D007426 ORTHO05D009167 3.5e-37 161.0 131 61.1
AT1G22960 Arabidopsis thaliana HOM05D007426 ORTHO05D009167 1.7e-36 158.7 212 42.0
Nitab4.5_0003886g0020 Nicotiana tabacum HOM05D007426 ORTHO05D009167 2.9e-36 157.9 165 48.5
Lalb_Chr10g0096341 Lupinus albus HOM05D007426 ORTHO05D009167 5.0e-36 157.1 224 42.9
SGA_v2.0_scaffold376G50296 Striga asiatica HOM05D007426 ORTHO05D009167 3.2e-35 154.5 167 48.5
Thhalv10006897m.g Eutrema salsugineum HOM05D007426 ORTHO05D009167 5.5e-35 153.7 213 42.7
Sp1g20420 Schrenkiella parvula HOM05D007426 ORTHO05D009167 5.5e-35 153.7 213 42.7
Lj2g0001206 Lotus japonicus HOM05D007426 ORTHO05D009167 9.4e-35 152.9 142 57.0
Carub.0001s2246 Capsella rubella HOM05D007426 ORTHO05D009167 2.7e-34 151.4 213 41.8
MBI02_g38361_MAGBIO Magnolia biondii HOM05D007426 ORTHO05D009167 2.3e-33 148.3 134 56.7
Ca_12586_v3 Cicer arietinum L. HOM05D007426 ORTHO05D009167 2.6e-32 144.8 208 46.2
Medtr1g031720 Medicago truncatula HOM05D007426 ORTHO05D009167 4.4e-32 144.1 165 48.5
Phvul.003G029100 Phaseolus vulgaris HOM05D007426 ORTHO05D009167 5.7e-32 143.7 197 46.2
VMungo1215G1392 Vigna mungo HOM05D007426 ORTHO05D009167 7.4e-32 143.3 145 53.8
arahy.Tifrunner.gnm1.ann1.A3A4LS Arachis hypogaea HOM05D007426 ORTHO05D009167 9.7e-32 142.9 180 46.7
arahy.Tifrunner.gnm1.ann1.5H8JFW Arachis hypogaea HOM05D003289 ORTHO05D009167 1.3e-31 142.5 180 46.7
Glyma.14G156100 Glycine max HOM05D007426 ORTHO05D009167 1.3e-31 142.5 137 53.3
Glyma.13G034900 Glycine max HOM05D007426 ORTHO05D009167 2.2e-31 141.7 137 54.0
SalBow8G0581 Salvia bowleyana HOM05D007426 ORTHO05D009167 3.7e-31 141.0 153 49.7
HPP92_023011 Vanilla planifolia HOM05D007426 ORTHO05D009167 6.3e-31 140.2 213 39.0
ECA234G2171 Erigeron canadensis HOM05D007426 ORTHO05D009167 8.2e-31 139.8 164 45.7
CAN.G1489.16 Capsicum annuum HOM05D007426 ORTHO05D009167 4.1e-30 137.5 134 53.7
Psat6g044600 Pisum sativum HOM05D007426 ORTHO05D009167 2.6e-29 134.8 141 51.8
BraA09t39664Z Brassica rapa HOM05D007426 ORTHO05D009167 1.3e-28 132.5 210 38.6
BolC5t30917H Brassica oleracea HOM05D007426 ORTHO05D009167 3.8e-28 131.0 211 39.3
BcaC05g26208 Brassica carinata HOM05D007426 ORTHO05D009167 1.9e-27 128.6 211 38.4
Migut.E00390 Erythranthe guttata HOM05D007426 ORTHO05D009167 1.9e-27 128.6 143 46.2
C05p22170 Brassica napus HOM05D007426 ORTHO05D009167 2.5e-27 128.3 173 41.0
ATR0579G149 Amborella trichopoda HOM05D007426 ORTHO05D009167 4.2e-27 127.5 173 42.8
Oeu048376.1 Olea europaea HOM05D007426 ORTHO05D009167 7.2e-27 126.7 160 45.0
A09p41750 Brassica napus HOM05D007426 ORTHO05D009167 2.1e-26 125.2 163 41.1
BcaB07g32294 Brassica carinata HOM05D007426 ORTHO05D009167 2.7e-26 124.8 211 37.0
A01p19900 Brassica napus HOM05D007426 ORTHO05D009167 6.1e-26 123.6 205 37.6
CSS0028756 Camellia sinensis var. sinensis HOM05D007426 ORTHO05D009167 2.6e-24 118.2 79 73.4
Cfa015816 Carpinus fangiana HOM05D007426 ORTHO05D009167 5.9e-21 107.1 75 65.3
TPR.G36966 Trifolium pratense HOM05D007426 ORTHO05D009167 2.3e-17 95.1 130 47.7
FvH4_4g26410 Fragaria vesca HOM05D007426 ORTHO05D009167 2.0e-13 82.0 90 47.8
BcaB03g11918 Brassica carinata HOM05D007426 ORTHO05D009167 2.5e-11 75.1 89 47.2
FAN17G2923 Fragaria x ananassa HOM05D007426 ORTHO05D009167 1.2e-10 72.8 80 48.8
CDE07G1153 Ceratophyllum demersum HOM05D007426 ORTHO05D009167 2.1e-10 72.0 66 59.1
SEGI_36761 Sequoiadendron giganteum HOM05D007426 ORTHO05D009167 1.0e-09 69.7 166 27.1
FAN07G1506 Fragaria x ananassa HOM05D007426 ORTHO05D009167 8.9e-09 66.6 61 52.5
Cc10_g03430 Coffea canephora HOM05D007639 ORTHO05D009509 2.2e-07 62.0 142 27.5
SEGI_39034 Sequoiadendron giganteum HOM05D007675 ORTHO05D009699 3.7e-07 61.2 128 30.5
CSS0024662 Camellia sinensis var. sinensis HOM05D007390 ORTHO05D009114 1.4e-06 59.3 121 28.9
CSS0045615 Camellia sinensis var. sinensis HOM05D007390 ORTHO05D009114 1.4e-06 59.3 121 28.9
TAR626G0036 Trochodendron aralioides HOM05D007390 ORTHO05D009114 1.4e-06 59.3 129 27.9
ATR0824G150 Amborella trichopoda HOM05D002460 ORTHO05D002716 2.4e-06 58.5 166 25.3
CSS0026781 Camellia sinensis var. sinensis HOM05D007639 ORTHO05D009509 3.1e-06 58.2 160 25.0
EL10Ac6g15406 Beta vulgaris HOM05D007496 ORTHO05D009479 5.4e-06 57.4 227 23.3
HanXRQChr05g0162401 Helianthus annuus HOM05D007390 ORTHO05D009114 5.4e-06 57.4 123 29.3
Zm00001eb164150 Zea mays HOM05D025020 ORTHO05D009167 7.0e-06 57.0 136 34.6
SEGI_21882 Sequoiadendron giganteum HOM05D007750 ORTHO05D009431 9.2e-06 56.6 121 28.1
Zm00001eb406750 Zea mays HOM05D025020 ORTHO05D009167 9.2e-06 56.6 137 33.6


User provided reference genes

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