Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0007274 Sechium edule HOM05D003537 ORTHO05D004180 2.4e-63 245.4 123 100.0
CsaV3_3G046470 Cucumis sativus L. HOM05D003537 ORTHO05D004180 8.4e-45 183.7 124 76.6
ClCG05G016980 Citrullus lanatus HOM05D003537 ORTHO05D004180 1.9e-44 182.6 132 76.5
Haze_21529 Corylus avellana HOM05D003537 ORTHO05D004180 9.6e-33 143.7 108 66.7
COL.COLO4_18845 Corchorus olitorius HOM05D003537 ORTHO05D004180 2.4e-31 139.0 106 63.2
Lj1g0012711 Lotus japonicus HOM05D003537 ORTHO05D004180 3.1e-31 138.7 100 73.0
VMungo1309G0037 Vigna mungo HOM05D003537 ORTHO05D004180 9.0e-31 137.1 81 84.0
Cc06_g08500 Coffea canephora HOM05D003537 ORTHO05D004180 2.6e-30 135.6 111 54.1
arahy.Tifrunner.gnm1.ann1.9FI3T7 Arachis hypogaea HOM05D003537 ORTHO05D004180 1.7e-29 132.9 105 61.0
Psat0s2233g0360 Pisum sativum HOM05D003537 ORTHO05D004180 1.7e-29 132.9 80 82.5
arahy.Tifrunner.gnm1.ann1.DMU7Q7 Arachis hypogaea HOM05D003537 ORTHO05D004180 3.8e-29 131.7 105 60.0
QL02p021910 Quercus lobata HOM05D003537 ORTHO05D004180 4.9e-29 131.3 117 53.0
Haze_25576 Corylus avellana HOM05D003537 ORTHO05D004180 8.4e-29 130.6 110 58.2
GSVIVG01015532001 Vitis vinifera HOM05D003537 ORTHO05D004180 1.9e-28 129.4 113 55.8
CSS0014531 Camellia sinensis var. sinensis HOM05D003537 ORTHO05D004180 3.2e-28 128.6 86 73.3
Gorai.010G114400 Gossypium raimondii HOM05D003537 ORTHO05D004180 3.2e-28 128.6 84 77.4
Manes.06G058601 Manihot esculenta HOM05D003537 ORTHO05D004180 7.1e-28 127.5 108 55.6
Gohir.A06G098204 Gossypium hirsutum HOM05D003537 ORTHO05D004180 1.2e-27 126.7 84 76.2
QL10p023445 Quercus lobata HOM05D003537 ORTHO05D004180 1.2e-27 126.7 109 50.5
Thecc.09G126600 Theobroma cacao HOM05D003537 ORTHO05D004180 4.6e-27 124.8 119 52.1
Actinidia21987 Actinidia chinensis HOM05D003537 ORTHO05D004180 7.9e-27 124.0 110 49.1
Eucgr.C01175 Eucalyptus grandis HOM05D003537 ORTHO05D004180 7.9e-27 124.0 110 51.8
Duzib150G0412 Durio zibethinus HOM05D003537 ORTHO05D004180 1.3e-26 123.2 119 50.4
CANSAT25G1571 Cannabis sativa HOM05D003537 ORTHO05D004180 1.8e-26 122.9 92 60.9
Gohir.D06G054550 Gossypium hirsutum HOM05D003537 ORTHO05D004180 6.7e-26 120.9 119 50.4
Gohir.A06G055900 Gossypium hirsutum HOM05D003537 ORTHO05D004180 8.7e-26 120.6 119 49.6
Medtr3g107397 Medicago truncatula HOM05D003537 ORTHO05D004180 8.7e-26 120.6 100 63.0
Actinidia40471 Actinidia chinensis HOM05D003537 ORTHO05D004180 1.5e-25 119.8 122 46.7
Ciclev10009876m.g Citrus clementina HOM05D003537 ORTHO05D004180 1.5e-25 119.8 121 54.5
Aa31LG8G16720 Aethionema arabicum HOM05D003537 ORTHO05D004180 1.9e-25 119.4 81 72.8
Gorai.010G063900 Gossypium raimondii HOM05D003537 ORTHO05D004180 1.9e-25 119.4 119 52.1
SGA_v2.0_scaffold12G06124 Striga asiatica HOM05D003537 ORTHO05D004180 2.5e-25 119.0 106 50.9
Gohir.A13G199600 Gossypium hirsutum HOM05D003537 ORTHO05D004180 4.3e-25 118.2 98 52.0
AL5G26940 Arabidopsis lyrata HOM05D003537 ORTHO05D004180 5.7e-25 117.9 77 64.9
Migut.K00478 Erythranthe guttata HOM05D003537 ORTHO05D004180 7.4e-25 117.5 81 66.7
Potri.018G068300 Populus trichocarpa HOM05D003537 ORTHO05D004180 7.4e-25 117.5 92 55.4
Gohir.D13G205100 Gossypium hirsutum HOM05D003537 ORTHO05D004180 9.7e-25 117.1 99 50.5
Gorai.013G234000 Gossypium raimondii HOM05D003537 ORTHO05D004180 9.7e-25 117.1 99 50.5
PGR142G2689 Punica granatum HOM05D003537 ORTHO05D004180 9.7e-25 117.1 120 48.3
Cpa.g.sc75.27 Carica papaya HOM05D003537 ORTHO05D004180 1.3e-24 116.7 105 54.3
CiPaw.04G171200 Carya illinoinensis HOM05D003537 ORTHO05D004180 1.3e-24 116.7 115 47.8
Atru.BG.3.p Acer truncatum HOM05D003537 ORTHO05D004180 1.6e-24 116.3 68 76.5
EL10Ac8g18657 Beta vulgaris HOM05D003537 ORTHO05D004180 2.2e-24 115.9 89 64.0
CANSAT11G2285 Cannabis sativa HOM05D003537 ORTHO05D004180 2.2e-24 115.9 99 60.6
MELO3C030460.2 Cucumis melo HOM05D003537 ORTHO05D004180 2.2e-24 115.9 89 73.0
ECA246G5170 Erigeron canadensis HOM05D003537 ORTHO05D004180 2.2e-24 115.9 121 53.7
Hma1.2p1_0018F.1_g012400 Hydrangea macrophylla HOM05D003537 ORTHO05D004180 3.7e-24 115.2 123 48.0
MSTRG.21979 Avicennia marina HOM05D003537 ORTHO05D004180 4.8e-24 114.8 104 52.9
Eucgr.C02783 Eucalyptus grandis HOM05D003537 ORTHO05D004180 4.8e-24 114.8 93 55.9
Nitab4.5_0002658g0060 Nicotiana tabacum HOM05D003537 ORTHO05D004180 4.8e-24 114.8 109 47.7
TAR636G0369 Trochodendron aralioides HOM05D003537 ORTHO05D004180 4.8e-24 114.8 110 56.4
unitig_26.g9662 Utricularia gibba HOM05D003537 ORTHO05D004180 4.8e-24 114.8 93 57.0
TPR.G3106 Trifolium pratense HOM05D003537 ORTHO05D004180 8.2e-24 114.0 100 65.0
ATR1120G202 Amborella trichopoda HOM05D003537 ORTHO05D004180 1.8e-23 112.8 73 74.0
HanXRQChr16g0505371 Helianthus annuus HOM05D003537 ORTHO05D004180 2.4e-23 112.5 81 65.4
PSO455G0045 Papaver somniferum HOM05D003537 ORTHO05D004180 3.1e-23 112.1 115 55.7
FAN23G0028 Fragaria x ananassa HOM05D003537 ORTHO05D004180 5.3e-23 111.3 108 53.7
Cc08_g00790 Coffea canephora HOM05D003537 ORTHO05D004180 6.9e-23 110.9 79 68.4
CsaV3_2G002870 Cucumis sativus L. HOM05D003537 ORTHO05D004180 1.2e-22 110.2 113 48.7
TWI63G0509 Tripterygium wilfordii HOM05D003537 ORTHO05D004180 2.0e-22 109.4 99 58.6
Migut.K00479 Erythranthe guttata HOM05D003537 ORTHO05D004180 2.6e-22 109.0 81 58.0
SGA_v2.0_scaffold17G08031 Striga asiatica HOM05D003537 ORTHO05D004180 2.6e-22 109.0 73 67.1
Ca_21681_v3 Cicer arietinum L. HOM05D003537 ORTHO05D004180 3.4e-22 108.6 121 50.4
Lsat_1_v5_gn_8_58621 Lactuca sativa HOM05D003537 ORTHO05D004180 3.4e-22 108.6 79 62.0
PSO170G5454 Papaver somniferum HOM05D003537 ORTHO05D004180 5.9e-22 107.8 116 55.2
Lj4g0026965 Lotus japonicus HOM05D003537 ORTHO05D004180 1.3e-21 106.7 74 68.9
MD02G1031600 Malus domestica HOM05D003537 ORTHO05D004180 1.3e-21 106.7 111 54.1
Ah.14g079820 Amaranthus hybridus HOM05D003537 ORTHO05D004180 1.7e-21 106.3 91 61.5
Glyma.17G114800 Glycine max HOM05D003537 ORTHO05D004180 1.7e-21 106.3 89 51.7
TAR625G0117 Trochodendron aralioides HOM05D003537 ORTHO05D004180 1.7e-21 106.3 103 57.3
Gohir.A06G143050 Gossypium hirsutum HOM05D003537 ORTHO05D004180 2.9e-21 105.5 88 52.3
Glyma.06G069100 Glycine max HOM05D003537 ORTHO05D004180 5.0e-21 104.8 123 52.8
Glyma.13G167200 Glycine max HOM05D003537 ORTHO05D004180 5.0e-21 104.8 93 51.6
CiPaw.08G011800 Carya illinoinensis HOM05D003537 ORTHO05D004180 1.1e-20 103.6 108 53.7
BcaB01g00893 Brassica carinata HOM05D003537 ORTHO05D004180 1.9e-20 102.8 73 63.0
Dinv18245 Davidia involucrata HOM05D003537 ORTHO05D004180 3.2e-20 102.1 88 62.5
Manes.14G132200 Manihot esculenta HOM05D003537 ORTHO05D004180 3.2e-20 102.1 110 43.6
Peaxi162Scf00256g00035 Petunia axillaris HOM05D003537 ORTHO05D004180 3.2e-20 102.1 104 48.1
RcHm_v2.0_Chr6g0298061 Rosa chinensis HOM05D003537 ORTHO05D004180 3.2e-20 102.1 118 50.8
Lsat_1_v5_gn_7_45281 Lactuca sativa HOM05D003537 ORTHO05D004180 4.2e-20 101.7 124 50.0
Nitab4.5_0010481g0030 Nicotiana tabacum HOM05D003537 ORTHO05D004180 4.2e-20 101.7 109 44.0
Manes.16G121200 Manihot esculenta HOM05D003537 ORTHO05D004180 5.5e-20 101.3 104 52.9
SEGI_36836 Sequoiadendron giganteum HOM05D003537 ORTHO05D004180 5.5e-20 101.3 81 67.9
Ciclev10009875m.g Citrus clementina HOM05D003537 ORTHO05D004180 7.2e-20 100.9 110 52.7
Sabra18G0030700 Salix brachista HOM05D003537 ORTHO05D004180 7.2e-20 100.9 114 46.5
Medtr4g114180 Medicago truncatula HOM05D003537 ORTHO05D004180 9.3e-20 100.5 73 57.5
Lalb_Chr08g0244061 Lupinus albus HOM05D003537 ORTHO05D004180 1.6e-19 99.8 91 60.4
Prupe.1G480000 Prunus persica HOM05D003537 ORTHO05D004180 1.6e-19 99.8 97 55.7
Potri.018G028500 Populus trichocarpa HOM05D003537 ORTHO05D004180 2.1e-19 99.4 108 45.4
THA.LOC104808988 Tarenaya hassleriana HOM05D003537 ORTHO05D004180 2.7e-19 99.0 81 61.7
Cfa003377 Carpinus fangiana HOM05D003537 ORTHO05D004180 3.6e-19 98.6 110 48.2
Dinv15950 Davidia involucrata HOM05D003537 ORTHO05D004180 3.6e-19 98.6 79 67.1
Thecc.09G026400 Theobroma cacao HOM05D003537 ORTHO05D004180 3.6e-19 98.6 88 61.4
Glyma.04G067500 Glycine max HOM05D003537 ORTHO05D004180 6.1e-19 97.8 103 56.3
Cpa.g.sc259.5 Carica papaya HOM05D003537 ORTHO05D004180 7.9e-19 97.4 118 50.0
arahy.Tifrunner.gnm1.ann1.F0XIJD Arachis hypogaea HOM05D003537 ORTHO05D004180 1.0e-18 97.1 122 43.4
TPR.G10724 Trifolium pratense HOM05D003537 ORTHO05D004180 1.8e-18 96.3 69 63.8
arahy.Tifrunner.gnm1.ann1.P86YY0 Arachis hypogaea HOM05D003537 ORTHO05D004180 2.3e-18 95.9 122 42.6
MELO3C004506.2 Cucumis melo HOM05D003537 ORTHO05D004180 2.3e-18 95.9 92 51.1
Dinv41510 Davidia involucrata HOM05D003537 ORTHO05D004180 3.0e-18 95.5 110 48.2
GSVIVG01035845001 Vitis vinifera HOM05D003537 ORTHO05D004180 3.0e-18 95.5 99 54.5
arahy.Tifrunner.gnm1.ann1.4IXQ36 Arachis hypogaea HOM05D003537 ORTHO05D004180 3.9e-18 95.1 90 48.9
arahy.Tifrunner.gnm1.ann1.EPB35R Arachis hypogaea HOM05D003537 ORTHO05D004180 3.9e-18 95.1 90 48.9
Pp3c18_21980 Physcomitrium patens HOM05D003537 ORTHO05D004180 5.1e-18 94.7 72 54.2
RcHm_v2.0_Chr2g0088401 Rosa chinensis HOM05D003537 ORTHO05D004180 5.1e-18 94.7 110 48.2
ECA240G1743 Erigeron canadensis HOM05D003537 ORTHO05D004180 6.7e-18 94.4 123 44.7
Psat4g040120 Pisum sativum HOM05D003537 ORTHO05D004180 6.7e-18 94.4 122 48.4
PGR044G0105 Punica granatum HOM05D003537 ORTHO05D004180 6.7e-18 94.4 111 48.6
Nn2g12030 Nelumbo nucifera HOM05D003537 ORTHO05D004180 4.3e-17 91.7 110 41.8
Peaxi162Scf00157g01525 Petunia axillaris HOM05D003537 ORTHO05D004180 4.3e-17 91.7 119 40.3
Lsat_1_v5_gn_5_30800 Lactuca sativa HOM05D003537 ORTHO05D004180 5.7e-17 91.3 69 62.3
Nn8g39452 Nelumbo nucifera HOM05D003537 ORTHO05D004180 5.7e-17 91.3 110 46.4
GSVIVG01015534001 Vitis vinifera HOM05D003537 ORTHO05D004180 5.7e-17 91.3 71 54.9
SMO145G0190 Selaginella moellendorffii HOM05D003537 ORTHO05D004180 7.4e-17 90.9 69 58.0
Hund09242 Selenicereus undatus HOM05D003537 ORTHO05D004180 9.7e-17 90.5 95 53.7
Atru.chr7.1160 Acer truncatum HOM05D003537 ORTHO05D004180 4.8e-16 88.2 105 41.0
TWI34G1168 Tripterygium wilfordii HOM05D003537 ORTHO05D004180 4.8e-16 88.2 104 42.3
HPP92_000667 Vanilla planifolia HOM05D003537 ORTHO05D004180 4.8e-16 88.2 108 41.7
ClCG11G003050 Citrullus lanatus HOM05D003537 ORTHO05D004180 6.3e-16 87.8 113 42.5
FvH4_2g29200 Fragaria vesca HOM05D003537 ORTHO05D004180 6.3e-16 87.8 104 48.1
FAN15G0527 Fragaria x ananassa HOM05D003537 ORTHO05D004180 1.1e-15 87.0 104 48.1
FAN27G1347 Fragaria x ananassa HOM05D003537 ORTHO05D004180 1.1e-15 87.0 104 48.1
BcaC01g02287 Brassica carinata HOM05D003537 ORTHO05D004180 2.4e-15 85.9 74 55.4
Glyma.06G222000 Glycine max HOM05D003537 ORTHO05D004180 3.1e-15 85.5 123 44.7
Glyma.04G147800 Glycine max HOM05D003537 ORTHO05D004180 6.9e-15 84.3 121 40.5
Solyc12g009440.2 Solanum lycopersicum HOM05D003537 ORTHO05D004180 6.9e-15 84.3 123 39.0
Sopen12g004440 Solanum pennellii HOM05D003537 ORTHO05D004180 6.9e-15 84.3 123 39.0
FvH4_1g03260 Fragaria vesca HOM05D003537 ORTHO05D004180 9.1e-15 84.0 110 45.5
FAN19G1671 Fragaria x ananassa HOM05D003537 ORTHO05D004180 9.1e-15 84.0 110 45.5
FAN28G2448 Fragaria x ananassa HOM05D003537 ORTHO05D004180 9.1e-15 84.0 110 45.5
MBI01_g36269_MAGBIO Magnolia biondii HOM05D003537 ORTHO05D004180 9.1e-15 84.0 77 59.7
PGSC0003DMG400002918 Solanum tuberosum HOM05D005825 ORTHO05D006483 1.2e-14 83.6 110 40.0
Sed0005083 Sechium edule HOM05D003537 ORTHO05D004180 2.0e-14 82.8 124 37.1
Oeu018469.1 Olea europaea HOM05D003537 ORTHO05D004180 2.6e-14 82.4 109 39.4
CARHR156330 Cardamine hirsuta HOM05D003537 ORTHO05D004180 3.4e-14 82.0 81 54.3
MD15G1124500 Malus domestica HOM05D003537 ORTHO05D004180 4.5e-14 81.6 79 49.4
AT3G47650 Arabidopsis thaliana HOM05D003537 ORTHO05D004180 5.9e-14 81.3 77 48.1
Phvul.003G164500 Phaseolus vulgaris HOM05D003537 ORTHO05D004180 7.7e-14 80.9 88 51.1
DCAR_003091 Daucus carota HOM05D003537 ORTHO05D004180 1.3e-13 80.1 62 67.7
Mapoly0035s0118 Marchantia polymorpha HOM05D002896 ORTHO05D003263 1.3e-13 80.1 72 48.6
CDE06G2093 Ceratophyllum demersum HOM05D003537 ORTHO05D004180 1.7e-13 79.7 97 43.3
Gohir.D06G099500 Gossypium hirsutum HOM05D003537 ORTHO05D004180 3.8e-13 78.6 61 70.5
Oeu007500.1 Olea europaea HOM05D003537 ORTHO05D004180 8.5e-13 77.4 109 45.0
VMungo1215G2386 Vigna mungo HOM05D003537 ORTHO05D004180 8.5e-13 77.4 88 50.0
Carub.0005s1378 Capsella rubella HOM05D003537 ORTHO05D004180 1.4e-12 76.6 79 53.2
Prupe.7G243100 Prunus persica HOM05D003537 ORTHO05D004180 1.9e-12 76.3 111 44.1
MD15G1173100 Malus domestica HOM05D003537 ORTHO05D004180 2.5e-12 75.9 117 43.6
Rhsim01G0071100 Rhododendron simsii HOM05D003537 ORTHO05D004180 2.5e-12 75.9 129 34.9
AUR62011130 Chenopodium quinoa HOM05D003537 ORTHO05D004180 3.2e-12 75.5 92 41.3
AUR62013357 Chenopodium quinoa HOM05D003537 ORTHO05D004180 3.2e-12 75.5 121 35.5
RhsimUnG0194700 Rhododendron simsii HOM05D003537 ORTHO05D004180 3.2e-12 75.5 110 37.3
Sp5g14270 Schrenkiella parvula HOM05D003537 ORTHO05D004180 3.2e-12 75.5 73 49.3
Os06g0332800 Oryza sativa ssp. japonica HOM05D003537 ORTHO05D004180 4.2e-12 75.1 91 49.5
A01p25800 Brassica napus HOM05D003537 ORTHO05D004180 9.4e-12 73.9 106 37.7
A06p27250 Brassica napus HOM05D003537 ORTHO05D004180 9.4e-12 73.9 75 45.3
BraA01t02496Z Brassica rapa HOM05D003537 ORTHO05D004180 9.4e-12 73.9 106 37.7
BcaB05g23065 Brassica carinata HOM05D003537 ORTHO05D004180 1.2e-11 73.6 75 53.3
CDE04G0424 Ceratophyllum demersum HOM05D003537 ORTHO05D004180 1.6e-11 73.2 97 40.2
THA.LOC104815279 Tarenaya hassleriana HOM05D003537 ORTHO05D004180 1.6e-11 73.2 81 44.4
BraA06t25666Z Brassica rapa HOM05D003537 ORTHO05D004180 2.1e-11 72.8 81 48.1
FAN24G0346 Fragaria x ananassa HOM05D003537 ORTHO05D004180 2.1e-11 72.8 80 52.5
Lalb_Chr07g0178961 Lupinus albus HOM05D003537 ORTHO05D004180 2.7e-11 72.4 75 44.0
A06p19950 Brassica napus HOM05D003537 ORTHO05D004180 4.7e-11 71.6 76 44.7
BraA06t25078Z Brassica rapa HOM05D003537 ORTHO05D004180 4.7e-11 71.6 76 44.7
BcaB02g10692 Brassica carinata HOM05D003537 ORTHO05D004180 6.1e-11 71.2 75 50.7
BcaC09g49812 Brassica carinata HOM05D003537 ORTHO05D004180 6.1e-11 71.2 75 52.0
C01p32690 Brassica napus HOM05D003537 ORTHO05D004180 6.1e-11 71.2 75 52.0
BolC1t03207H Brassica oleracea HOM05D003537 ORTHO05D004180 6.1e-11 71.2 75 49.3
C03p67010 Brassica napus HOM05D003537 ORTHO05D004180 1.0e-10 70.5 73 46.6
BolC3t18976H Brassica oleracea HOM05D003537 ORTHO05D004180 1.0e-10 70.5 73 46.6
C03p71880 Brassica napus HOM05D003537 ORTHO05D004180 1.8e-10 69.7 76 51.3
BcaC01g01786 Brassica carinata HOM05D003537 ORTHO05D004180 3.0e-10 68.9 76 43.4
Lalb_Chr13g0301861 Lupinus albus HOM05D003537 ORTHO05D004180 3.9e-10 68.6 72 48.6
Aqoxy7G02181 Aquilegia oxysepala HOM05D003537 ORTHO05D004180 6.7e-10 67.8 110 34.5
Duzib168G0240 Durio zibethinus HOM05D003537 ORTHO05D004180 1.5e-09 66.6 101 37.6
Thhalv10010812m.g Eutrema salsugineum HOM05D003537 ORTHO05D004180 3.3e-09 65.5 72 44.4
SalBow1G5494 Salvia bowleyana HOM05D003537 ORTHO05D004180 4.4e-09 65.1 102 38.2
vmacro20557 Vaccinium macrocarpon HOM05D003537 ORTHO05D004180 4.4e-09 65.1 129 31.0
FAN26G0344 Fragaria x ananassa HOM05D003537 ORTHO05D004180 7.4e-09 64.3 54 64.8
Sabra18G0060200 Salix brachista HOM05D003537 ORTHO05D004180 7.4e-09 64.3 115 35.7
HanXRQChr09g0242821 Helianthus annuus HOM05D003537 ORTHO05D004180 9.7e-09 63.9 120 40.0
vmacro23102 Vaccinium macrocarpon HOM05D003537 ORTHO05D004180 3.7e-08 62.0 77 39.0
Gohir.A10G065840 Gossypium hirsutum HOM05D003537 ORTHO05D004180 2.6e-06 55.8 53 49.1
MCO09G833 Micromonas commoda HOM05D001438 ORTHO05D001336 2.6e-06 55.8 50 48.0


User provided reference genes

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