Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0007191 Sechium edule HOM05D007874 ORTHO05D009614 5.3e-67 257.7 143 100.0
ClCG01G006070 Citrullus lanatus HOM05D030674 ORTHO05D009614 1.7e-28 129.8 145 60.0
MELO3C005324.2 Cucumis melo HOM05D030674 ORTHO05D009614 6.6e-25 117.9 137 56.2
Sed0022211 Sechium edule HOM05D030674 ORTHO05D009614 4.3e-24 115.2 148 57.4
Sabra10G0083200 Salix brachista HOM05D007874 ORTHO05D009614 1.9e-16 89.7 88 55.7
CiPaw.05G249700 Carya illinoinensis HOM05D007874 ORTHO05D009614 5.6e-16 88.2 150 46.7
Gorai.002G179200 Gossypium raimondii HOM05D007874 ORTHO05D009614 5.6e-16 88.2 147 39.5
CsaV3_5G028610 Cucumis sativus L. HOM05D030674 ORTHO05D009614 2.8e-15 85.9 129 48.8
Ciclev10017051m.g Citrus clementina HOM05D007874 ORTHO05D009614 1.4e-14 83.6 149 36.9
Duzib251G0922 Durio zibethinus HOM05D007874 ORTHO05D009614 2.3e-14 82.8 151 37.1
Thecc.02G281500 Theobroma cacao HOM05D007874 ORTHO05D009614 3.1e-14 82.4 149 43.0
Gohir.D01G145200 Gossypium hirsutum HOM05D007874 ORTHO05D009614 1.5e-13 80.1 150 37.3
Potri.008G129200 Populus trichocarpa HOM05D007874 ORTHO05D009614 7.5e-13 77.8 140 38.6
CANSAT01G3222 Cannabis sativa HOM05D007874 ORTHO05D009614 9.9e-13 77.4 141 38.3
Dinv05171 Davidia involucrata HOM05D007874 ORTHO05D009614 1.7e-12 76.6 130 38.5
Haze_11010 Corylus avellana HOM05D007874 ORTHO05D009614 2.9e-12 75.9 140 40.0
Manes.15G127500 Manihot esculenta HOM05D007874 ORTHO05D009614 3.7e-12 75.5 132 40.9
Cpa.g.sc65.135 Carica papaya HOM05D007874 ORTHO05D009614 1.1e-11 73.9 125 39.2
QL01p001738 Quercus lobata HOM05D007874 ORTHO05D009614 1.9e-11 73.2 150 41.3
Hma1.2p1_0096F.1_g047930 Hydrangea macrophylla HOM05D007874 ORTHO05D009614 3.2e-11 72.4 142 44.4
Nitab4.5_0002523g0020 Nicotiana tabacum HOM05D007874 ORTHO05D009614 5.4e-11 71.6 147 40.8
DCAR_026776 Daucus carota HOM05D007874 ORTHO05D009614 1.2e-10 70.5 111 41.4
Manes.17G076900 Manihot esculenta HOM05D007874 ORTHO05D009614 1.3e-09 67.0 144 34.7
Cc11_g08720 Coffea canephora HOM05D007874 ORTHO05D009614 1.7e-09 66.6 141 41.8
Eucgr.G02190 Eucalyptus grandis HOM05D007874 ORTHO05D009614 2.3e-09 66.2 121 38.0
BcaB03g14859 Brassica carinata HOM05D007874 ORTHO05D009614 3.9e-09 65.5 131 42.0
Rhsim09G0067000 Rhododendron simsii HOM05D007874 ORTHO05D009614 3.9e-09 65.5 140 38.6
Aa31LG4G10100 Aethionema arabicum HOM05D007874 ORTHO05D009614 5.1e-09 65.1 100 41.0
PGR102G2496 Punica granatum HOM05D007874 ORTHO05D009614 1.1e-08 63.9 156 35.9
CiPaw.06G012000 Carya illinoinensis HOM05D007874 ORTHO05D009614 1.5e-08 63.5 146 33.6
THA.LOC104809191 Tarenaya hassleriana HOM05D007874 ORTHO05D009614 1.5e-08 63.5 104 40.4
CARHR064260 Cardamine hirsuta HOM05D007874 ORTHO05D009614 1.9e-08 63.2 110 37.3
Nitab4.5_0000742g0160 Nicotiana tabacum HOM05D007874 ORTHO05D009614 2.5e-08 62.8 138 36.2
Eucgr.B02901 Eucalyptus grandis HOM05D007874 ORTHO05D009614 7.3e-08 61.2 134 40.3
MSTRG.901 Avicennia marina HOM05D007874 ORTHO05D009614 9.5e-08 60.8 154 35.7
EL10Ac6g14213 Beta vulgaris HOM05D007874 ORTHO05D009614 1.6e-07 60.1 119 35.3
Duzib248G1518 Durio zibethinus HOM05D007874 ORTHO05D009614 1.6e-07 60.1 113 40.7
Sabra08G0097900 Salix brachista HOM05D007874 ORTHO05D009614 1.6e-07 60.1 143 32.9
Lsat_1_v5_gn_3_54800 Lactuca sativa HOM05D007874 ORTHO05D009614 2.8e-07 59.3 121 33.1
BcaB05g24626 Brassica carinata HOM05D007874 ORTHO05D009614 3.6e-07 58.9 114 34.2
Potri.010G113100 Populus trichocarpa HOM05D007874 ORTHO05D009614 2.4e-06 56.2 142 38.7
Glyma.07G216900 Glycine max HOM05D017162 ORTHO05D009614 4.0e-06 55.5 147 30.6
RcHm_v2.0_Chr4g0441281 Rosa chinensis HOM05D020194 ORTHO05D009614 6.8e-06 54.7 143 32.9


User provided reference genes

Program Settings