Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0007183 Sechium edule HOM05D008295 ORTHO05D010471 1.0e-46 189.5 82 100.0
Eucgr.H04400 Eucalyptus grandis HOM05D008295 ORTHO05D010471 1.5e-21 105.9 74 63.5
TWI56G0380 Tripterygium wilfordii HOM05D008295 ORTHO05D010471 2.5e-21 105.1 51 78.4
CiPaw.07G008800 Carya illinoinensis HOM05D008295 ORTHO05D010471 9.6e-21 103.2 76 57.9
Sabra13G0032600 Salix brachista HOM05D008295 ORTHO05D010471 6.2e-20 100.5 50 74.0
Manes.09G157700 Manihot esculenta HOM05D008295 ORTHO05D010471 8.1e-20 100.1 76 57.9
CiPaw.08G178100 Carya illinoinensis HOM05D008295 ORTHO05D010471 4.0e-19 97.8 73 54.8
Potri.013G032700 Populus trichocarpa HOM05D008295 ORTHO05D010471 5.3e-19 97.4 76 56.6
PGR004G0687 Punica granatum HOM05D008295 ORTHO05D010471 1.0e-17 93.2 78 57.7
Duzib106G0032 Durio zibethinus HOM05D008295 ORTHO05D010471 3.2e-16 88.2 75 53.3
QL04p009826 Quercus lobata HOM05D008295 ORTHO05D010471 2.1e-15 85.5 75 54.7
AT3G04945 Arabidopsis thaliana HOM05D008295 ORTHO05D010471 3.9e-14 81.3 50 64.0
AL3G15280 Arabidopsis lyrata HOM05D008295 ORTHO05D010471 1.1e-13 79.7 65 53.8
CSS0021153 Camellia sinensis var. sinensis HOM05D008295 ORTHO05D010471 6.2e-12 73.9 50 58.0
QL04p009829 Quercus lobata HOM05D008295 ORTHO05D010471 4.0e-11 71.2 53 54.7
CSS0043617 Camellia sinensis var. sinensis HOM05D008295 ORTHO05D010471 5.3e-11 70.9 50 54.0
CARHR079250 Cardamine hirsuta HOM05D008295 ORTHO05D010471 5.3e-11 70.9 48 56.2
Thhalv10022226m.g Eutrema salsugineum HOM05D008295 ORTHO05D010471 5.3e-11 70.9 50 54.0
BcaC01g04340 Brassica carinata HOM05D008295 ORTHO05D010471 1.2e-10 69.7 50 56.0
A03p33940 Brassica napus HOM05D008295 ORTHO05D010471 1.2e-10 69.7 50 56.0
C03p41320 Brassica napus HOM05D008295 ORTHO05D010471 1.2e-10 69.7 50 56.0
BolC3t16414H Brassica oleracea HOM05D008295 ORTHO05D010471 1.2e-10 69.7 50 56.0
BraA03t12569Z Brassica rapa HOM05D008295 ORTHO05D010471 1.2e-10 69.7 50 56.0
A03p33930 Brassica napus HOM05D008295 ORTHO05D010471 1.5e-10 69.3 50 58.0
BraA03t12568Z Brassica rapa HOM05D008295 ORTHO05D010471 1.5e-10 69.3 50 58.0
BcaB04g19287 Brassica carinata HOM05D008295 ORTHO05D010471 3.4e-10 68.2 50 54.0
BcaC05g29971 Brassica carinata HOM05D008295 ORTHO05D010471 5.8e-10 67.4 50 54.0
BcaC01g04341 Brassica carinata HOM05D008295 ORTHO05D010471 1.0e-09 66.6 50 56.0
C03p41310 Brassica napus HOM05D008295 ORTHO05D010471 1.0e-09 66.6 50 56.0
A05p42650 Brassica napus HOM05D008295 ORTHO05D010471 1.3e-09 66.2 50 52.0
BolC3t16413H Brassica oleracea HOM05D008295 ORTHO05D010471 1.3e-09 66.2 65 46.2
BraA05t22988Z Brassica rapa HOM05D008295 ORTHO05D010471 1.3e-09 66.2 50 52.0
BcaC05g29925 Brassica carinata HOM05D008295 ORTHO05D010471 2.2e-09 65.5 50 52.0
BolC5t34892H Brassica oleracea HOM05D008295 ORTHO05D010471 2.2e-09 65.5 50 52.0
C05p62320 Brassica napus HOM05D008295 ORTHO05D010471 2.9e-09 65.1 50 52.0
A05p42640 Brassica napus HOM05D008295 ORTHO05D010471 5.0e-09 64.3 50 50.0
C05p62360 Brassica napus HOM05D008295 ORTHO05D010471 5.0e-09 64.3 50 50.0
C05p62380 Brassica napus HOM05D008295 ORTHO05D010471 5.0e-09 64.3 50 50.0
BraA05t22987Z Brassica rapa HOM05D008295 ORTHO05D010471 5.0e-09 64.3 50 50.0
BraA05t22989Z Brassica rapa HOM05D008295 ORTHO05D010471 5.0e-09 64.3 50 50.0
Actinidia30915 Actinidia chinensis HOM05D008295 ORTHO05D010471 8.4e-09 63.5 60 46.7
BcaB05g24460 Brassica carinata HOM05D008295 ORTHO05D010471 8.4e-09 63.5 50 50.0
C02p26540 Brassica napus HOM05D008295 ORTHO05D010471 1.1e-08 63.2 50 48.0
BcaC05g29923 Brassica carinata HOM05D008295 ORTHO05D010471 1.4e-08 62.8 50 50.0
BolC5t34888H Brassica oleracea HOM05D008295 ORTHO05D010471 1.4e-08 62.8 50 50.0
CSS0023258 Camellia sinensis var. sinensis HOM05D008295 ORTHO05D010471 1.4e-08 62.8 50 48.0
A02p15960 Brassica napus HOM05D008295 ORTHO05D010471 1.9e-08 62.4 50 48.0
BcaC03g15093 Brassica carinata HOM05D008295 ORTHO05D010471 3.2e-08 61.6 50 46.0
BolC2t08725H Brassica oleracea HOM05D008295 ORTHO05D010471 3.2e-08 61.6 50 46.0
BraA02t06655Z Brassica rapa HOM05D008295 ORTHO05D010471 1.6e-07 59.3 50 46.0
AL3G37780 Arabidopsis lyrata HOM05D008295 ORTHO05D010471 6.7e-06 53.9 71 39.4


User provided reference genes

Program Settings