Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0007151 Sechium edule HOM05D000248 ORTHO05D000146 2.5e-95 352.1 172 100.0
Sed0001347 Sechium edule HOM05D000248 ORTHO05D000146 8.4e-51 204.1 164 60.4
Sed0003229 Sechium edule HOM05D000248 ORTHO05D000146 4.0e-45 185.3 132 71.2
Sed0013596 Sechium edule HOM05D000248 ORTHO05D000146 1.4e-42 176.8 160 50.6
Sed0027898 Sechium edule HOM05D000248 ORTHO05D000146 1.1e-37 160.6 172 48.8
GSVIVG01012084001 Vitis vinifera HOM05D000248 ORTHO05D000146 6.7e-16 88.2 159 35.2
FAN21G1612 Fragaria x ananassa HOM05D000248 ORTHO05D000146 3.7e-14 82.4 157 34.4
RcHm_v2.0_Chr5g0019941 Rosa chinensis HOM05D000248 ORTHO05D000146 4.8e-14 82.0 157 35.0
FvH4_3g12180 Fragaria vesca HOM05D000248 ORTHO05D000146 6.3e-14 81.6 157 35.0
vmacro03508 Vaccinium macrocarpon HOM05D000248 ORTHO05D000146 6.3e-14 81.6 159 30.8
FAN16G2898 Fragaria x ananassa HOM05D000248 ORTHO05D000146 8.2e-14 81.3 157 35.0
Prupe.4G107700 Prunus persica HOM05D000248 ORTHO05D000146 1.1e-13 80.9 157 31.8
DCAR_004324 Daucus carota HOM05D000248 ORTHO05D000146 2.4e-13 79.7 160 35.0
PGR042G3762 Punica granatum HOM05D000248 ORTHO05D000146 2.4e-13 79.7 160 30.6
Eucgr.E01960 Eucalyptus grandis HOM05D000248 ORTHO05D000146 6.9e-13 78.2 158 28.5
Prupe.4G107600 Prunus persica HOM05D000248 ORTHO05D000146 9.1e-13 77.8 157 31.2
Aqoxy1G01476 Aquilegia oxysepala HOM05D002966 ORTHO05D003274 1.2e-12 77.4 159 34.0
C03p82340 Brassica napus HOM05D000248 ORTHO05D000146 1.2e-12 77.4 163 31.9
BolC3t20519H Brassica oleracea HOM05D000248 ORTHO05D000146 1.2e-12 77.4 163 31.9
RhsimUnG0089300 Rhododendron simsii HOM05D000248 ORTHO05D000146 1.2e-12 77.4 159 31.4
Sed0026007 Sechium edule HOM05D000248 ORTHO05D000146 1.5e-12 77.0 160 30.6
vmacro03512 Vaccinium macrocarpon HOM05D000248 ORTHO05D000146 1.5e-12 77.0 160 32.5
BcaC01g00637 Brassica carinata HOM05D000248 ORTHO05D000146 2.6e-12 76.3 163 31.3
CSS0043860 Camellia sinensis var. sinensis HOM05D000248 ORTHO05D000146 3.4e-12 75.9 159 32.1
Rhsim13G0131500 Rhododendron simsii HOM05D000248 ORTHO05D000146 3.4e-12 75.9 159 30.8
Hma1.2p1_0040F.1_g025210 Hydrangea macrophylla HOM05D000248 ORTHO05D000146 4.5e-12 75.5 163 30.1
ClCG01G009230 Citrullus lanatus HOM05D000248 ORTHO05D000146 5.9e-12 75.1 159 30.2
Ciclev10016359m.g Citrus clementina HOM05D000248 ORTHO05D000146 5.9e-12 75.1 161 31.1
Prupe.4G110500 Prunus persica HOM05D000248 ORTHO05D000146 1.0e-11 74.3 157 31.8
Sed0001147 Sechium edule HOM05D000248 ORTHO05D000146 1.3e-11 73.9 159 30.2
CARHR226610 Cardamine hirsuta HOM05D000248 ORTHO05D000146 1.7e-11 73.6 157 32.5
Medtr4g083970 Medicago truncatula HOM05D000248 ORTHO05D000146 1.7e-11 73.6 161 29.8
BcaB03g11644 Brassica carinata HOM05D000248 ORTHO05D000146 2.9e-11 72.8 157 30.6
Glyma.20G021500 Glycine max HOM05D000248 ORTHO05D000146 5.0e-11 72.0 159 28.3
SalBow8G2337 Salvia bowleyana HOM05D000248 ORTHO05D000146 6.5e-11 71.6 160 33.8
SalBow8G3348 Salvia bowleyana HOM05D000248 ORTHO05D000146 6.5e-11 71.6 160 33.8
HanXRQChr12g0378211 Helianthus annuus HOM05D000248 ORTHO05D000146 8.5e-11 71.2 159 31.4
TPR.G20975 Trifolium pratense HOM05D000248 ORTHO05D000146 8.5e-11 71.2 159 29.6
VMungo0251G0674 Vigna mungo HOM05D000248 ORTHO05D000146 8.5e-11 71.2 159 27.7
A08p14520 Brassica napus HOM05D000248 ORTHO05D000146 1.1e-10 70.9 163 30.1
BraA08t33440Z Brassica rapa HOM05D000248 ORTHO05D000146 1.1e-10 70.9 163 30.1
Psat7g137440 Pisum sativum HOM05D000248 ORTHO05D000146 1.1e-10 70.9 159 29.6
Sed0027219 Sechium edule HOM05D000248 ORTHO05D000146 1.1e-10 70.9 165 29.1
Ah.09g235220 Amaranthus hybridus HOM05D000248 ORTHO05D000146 1.4e-10 70.5 162 29.0
Lj4g0006685 Lotus japonicus HOM05D000248 ORTHO05D000146 1.4e-10 70.5 159 30.2
PSO781G0213 Papaver somniferum HOM05D000248 ORTHO05D000146 1.4e-10 70.5 163 30.1
arahy.Tifrunner.gnm1.ann1.ZZ7G8M Arachis hypogaea HOM05D000248 ORTHO05D000146 2.5e-10 69.7 159 30.8
SGA_v2.0_scaffold298G47681 Striga asiatica HOM05D000248 ORTHO05D000146 3.2e-10 69.3 157 30.6
Actinidia22390 Actinidia chinensis HOM05D000248 ORTHO05D000146 4.2e-10 68.9 160 30.0
Carub.0007s2137 Capsella rubella HOM05D000248 ORTHO05D000146 4.2e-10 68.9 160 30.6
CiPaw.09G078400 Carya illinoinensis HOM05D000248 ORTHO05D000146 4.2e-10 68.9 157 30.6
CiPaw.09G078500 Carya illinoinensis HOM05D000248 ORTHO05D000146 4.2e-10 68.9 161 29.8
Thhalv10026213m.g Eutrema salsugineum HOM05D000248 ORTHO05D000146 4.2e-10 68.9 159 32.1
EL10Ac8g20003 Beta vulgaris HOM05D000248 ORTHO05D000146 5.5e-10 68.6 157 30.6
BcaC09g51365 Brassica carinata HOM05D000248 ORTHO05D000146 5.5e-10 68.6 159 29.6
BolC1t01356H Brassica oleracea HOM05D000248 ORTHO05D000146 5.5e-10 68.6 161 29.8
Lsat_1_v5_gn_5_36281 Lactuca sativa HOM05D000248 ORTHO05D000146 5.5e-10 68.6 159 29.6
Ah.14g088120 Amaranthus hybridus HOM05D000248 ORTHO05D000146 7.2e-10 68.2 157 29.9
C01p13880 Brassica napus HOM05D000248 ORTHO05D000146 9.4e-10 67.8 161 29.8
TWI38G2162 Tripterygium wilfordii HOM05D000248 ORTHO05D000146 9.4e-10 67.8 159 28.9
Duzib235G1290 Durio zibethinus HOM05D000248 ORTHO05D000146 1.2e-09 67.4 159 27.7
Manes.03G070740 Manihot esculenta HOM05D000248 ORTHO05D000146 1.2e-09 67.4 162 32.1
BcaNung01748 Brassica carinata HOM05D000248 ORTHO05D000146 1.6e-09 67.0 159 29.6
Haze_06029 Corylus avellana HOM05D000248 ORTHO05D000146 1.6e-09 67.0 160 30.6
Sp7g18340 Schrenkiella parvula HOM05D000248 ORTHO05D000146 1.6e-09 67.0 159 29.6
PGSC0003DMG402010355 Solanum tuberosum HOM05D000248 ORTHO05D000146 1.6e-09 67.0 160 33.8
MSTRG.16340 Avicennia marina HOM05D000248 ORTHO05D000146 2.1e-09 66.6 157 29.9
A01p11710 Brassica napus HOM05D000248 ORTHO05D000146 2.1e-09 66.6 159 30.8
BraA01t01113Z Brassica rapa HOM05D000248 ORTHO05D000146 2.1e-09 66.6 159 30.8
Phvul.002G098900 Phaseolus vulgaris HOM05D000248 ORTHO05D000146 2.1e-09 66.6 159 25.8
Cfa017672 Carpinus fangiana HOM05D000248 ORTHO05D000146 2.7e-09 66.2 156 28.8
Cfa000721 Carpinus fangiana HOM05D000248 ORTHO05D000146 3.6e-09 65.9 160 29.4
CDE05G3505 Ceratophyllum demersum HOM05D000248 ORTHO05D000146 3.6e-09 65.9 162 29.0
Glyma.20G020900 Glycine max HOM05D000248 ORTHO05D000146 3.6e-09 65.9 161 28.0
MELO3C027112.2 Cucumis melo HOM05D000248 ORTHO05D000146 4.7e-09 65.5 158 27.2
ECA246G2098 Erigeron canadensis HOM05D000248 ORTHO05D000146 4.7e-09 65.5 157 31.8
Aqoxy4G01029 Aquilegia oxysepala HOM05D000248 ORTHO05D000146 6.1e-09 65.1 159 30.8
Lsat_1_v5_gn_5_36341 Lactuca sativa HOM05D000248 ORTHO05D000146 6.1e-09 65.1 156 27.6
Lsat_1_v5_gn_5_36381 Lactuca sativa HOM05D000248 ORTHO05D000146 8.0e-09 64.7 157 26.8
MBI01_g44880_MAGBIO Magnolia biondii HOM05D000248 ORTHO05D000146 8.0e-09 64.7 159 30.2
Peaxi162Scf00149g00813 Petunia axillaris HOM05D000248 ORTHO05D000146 1.0e-08 64.3 159 32.7
Prupe.8G030100 Prunus persica HOM05D000248 ORTHO05D000146 1.0e-08 64.3 159 33.3
CDE02G1016 Ceratophyllum demersum HOM05D000248 ORTHO05D000146 1.4e-08 63.9 166 27.7
arahy.Tifrunner.gnm1.ann1.6F5IGY Arachis hypogaea HOM05D000248 ORTHO05D000146 1.8e-08 63.5 159 29.6
Ca_18768_v3 Cicer arietinum L. HOM05D000248 ORTHO05D000146 1.8e-08 63.5 159 29.6
Lj1C1144T7 Lonicera japonica HOM05D000248 ORTHO05D000146 1.8e-08 63.5 160 28.1
Nitab4.5_0003773g0020 Nicotiana tabacum HOM05D000248 ORTHO05D000146 1.8e-08 63.5 160 33.8
PSO541G4482 Papaver somniferum HOM05D000248 ORTHO05D000146 1.8e-08 63.5 163 29.4
CDE02G1336 Ceratophyllum demersum HOM05D000248 ORTHO05D000146 2.3e-08 63.2 166 27.7
HPP92_014205 Vanilla planifolia HOM05D000248 ORTHO05D000146 2.3e-08 63.2 159 30.2
HPP92_026464 Vanilla planifolia HOM05D000248 ORTHO05D000146 2.3e-08 63.2 159 30.2
GSVIVG01019344001 Vitis vinifera HOM05D000248 ORTHO05D000146 2.3e-08 63.2 131 31.3
Aa31LG9G8140 Aethionema arabicum HOM05D000248 ORTHO05D004260 3.0e-08 62.8 168 28.0
Aqoxy5G03128 Aquilegia oxysepala HOM05D000248 ORTHO05D000146 3.0e-08 62.8 166 28.3
AL7G34240 Arabidopsis lyrata HOM05D000248 ORTHO05D000146 3.0e-08 62.8 159 27.7
Oeu050057.1 Olea europaea HOM05D000248 ORTHO05D000146 3.0e-08 62.8 165 27.9
PSO675G0473 Papaver somniferum HOM05D000248 ORTHO05D000146 3.0e-08 62.8 163 29.4
AT4G19840 Arabidopsis thaliana HOM05D000248 ORTHO05D000146 3.9e-08 62.4 159 28.3
ECA234G4187 Erigeron canadensis HOM05D000248 ORTHO05D000146 3.9e-08 62.4 166 26.5
Nitab4.5_0002056g0070 Nicotiana tabacum HOM05D000248 ORTHO05D000146 3.9e-08 62.4 160 33.1
Psat7g130600 Pisum sativum HOM05D000248 ORTHO05D000146 3.9e-08 62.4 159 27.0
QL11p018028 Quercus lobata HOM05D000248 ORTHO05D000146 3.9e-08 62.4 126 33.3
CDE02G3305 Ceratophyllum demersum HOM05D000248 ORTHO05D000146 5.2e-08 62.0 166 27.7
Os01g0158400 Oryza sativa ssp. japonica HOM05D000248 ORTHO05D000146 5.2e-08 62.0 159 29.6
vmacro03509 Vaccinium macrocarpon HOM05D000248 ORTHO05D000146 5.2e-08 62.0 169 27.8
PSO170G6818 Papaver somniferum HOM05D000248 ORTHO05D000146 6.7e-08 61.6 163 29.4
PSO384G4796 Papaver somniferum HOM05D000009 ORTHO05D000008 8.8e-08 61.2 162 29.0
Sopen02g018100 Solanum pennellii HOM05D000248 ORTHO05D000146 8.8e-08 61.2 160 32.5
CsaV3_1G046420 Cucumis sativus L. HOM05D000248 ORTHO05D000146 1.1e-07 60.8 158 25.9
Solyc02g069020.3 Solanum lycopersicum HOM05D000248 ORTHO05D000146 1.1e-07 60.8 160 32.5
Cc09_g06220 Coffea canephora HOM05D000248 ORTHO05D000146 2.0e-07 60.1 159 28.3
MELO3C020120.2 Cucumis melo HOM05D000248 ORTHO05D000146 2.0e-07 60.1 158 27.8
Eucgr.J02760 Eucalyptus grandis HOM05D000248 ORTHO05D000146 2.6e-07 59.7 118 31.4
CSS0015990 Camellia sinensis var. sinensis HOM05D000248 ORTHO05D000146 3.3e-07 59.3 124 30.6
CDE05G1215 Ceratophyllum demersum HOM05D000248 ORTHO05D000146 4.4e-07 58.9 124 32.3
CsaV3_1G037660 Cucumis sativus L. HOM05D000248 ORTHO05D000146 4.4e-07 58.9 160 28.8
CAN.G519.7 Capsicum annuum HOM05D000248 ORTHO05D000146 7.4e-07 58.2 158 32.3
ECA247G2058 Erigeron canadensis HOM05D000248 ORTHO05D000146 7.4e-07 58.2 156 30.1
Eucgr.J02622 Eucalyptus grandis HOM05D000248 ORTHO05D000146 7.4e-07 58.2 119 31.1
Eucgr.J02780 Eucalyptus grandis HOM05D000248 ORTHO05D000146 7.4e-07 58.2 119 30.3
MD05G1355700 Malus domestica HOM05D000248 ORTHO05D000146 7.4e-07 58.2 125 34.4
Thhalv10001121m.g Eutrema salsugineum HOM05D000005 ORTHO05D004260 9.7e-07 57.8 160 28.8
COL.COLO4_30983 Corchorus olitorius HOM05D000248 ORTHO05D000146 1.3e-06 57.4 159 26.4
Prupe.8G030000 Prunus persica HOM05D000248 ORTHO05D000146 1.3e-06 57.4 155 31.0
BcaC06g31576 Brassica carinata HOM05D000005 ORTHO05D004260 1.7e-06 57.0 162 29.0
RcHm_v2.0_Chr2g0136311 Rosa chinensis HOM05D000248 ORTHO05D000146 1.7e-06 57.0 120 30.8
Sc24g0000100 Simmondsia chinensis HOM05D000248 ORTHO05D000146 1.7e-06 57.0 163 25.8
BcaB07g30914 Brassica carinata HOM05D000005 ORTHO05D004260 2.2e-06 56.6 161 27.3
Dinv43516 Davidia involucrata HOM05D000248 ORTHO05D000146 2.8e-06 56.2 120 30.8
Sc02g0005710 Simmondsia chinensis HOM05D000248 ORTHO05D000146 2.8e-06 56.2 120 28.3
BraA06t27551Z Brassica rapa HOM05D000005 ORTHO05D004260 3.7e-06 55.8 165 29.7
Haze_23999 Corylus avellana HOM05D000248 ORTHO05D000146 3.7e-06 55.8 121 31.4
Sp2g09870 Schrenkiella parvula HOM05D000248 ORTHO05D000146 3.7e-06 55.8 161 29.2
FvH4_6g30090 Fragaria vesca HOM05D000248 ORTHO05D000146 4.8e-06 55.5 136 30.9
FAN14G0723 Fragaria x ananassa HOM05D000248 ORTHO05D000146 4.8e-06 55.5 136 30.9
CiPaw.09G078600 Carya illinoinensis HOM05D000248 ORTHO05D000146 6.3e-06 55.1 121 30.6
Lalb_Chr16g0385281 Lupinus albus HOM05D000248 ORTHO05D000146 8.2e-06 54.7 164 28.7


User provided reference genes

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