Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0007149 Sechium edule HOM05D006901 ORTHO05D008582 1.5e-87 326.2 171 100.0
ClCG08G007260 Citrullus lanatus HOM05D006901 ORTHO05D008582 3.3e-55 218.8 171 75.4
MELO3C019969.2 Cucumis melo HOM05D006901 ORTHO05D008582 3.5e-49 198.7 171 70.2
CsaV3_6G004930 Cucumis sativus L. HOM05D006901 ORTHO05D008582 1.3e-48 196.8 171 70.2
MD10G1037700 Malus domestica HOM05D006901 ORTHO05D008582 3.2e-34 149.1 152 60.5
MD05G1035400 Malus domestica HOM05D006901 ORTHO05D008582 4.2e-34 148.7 153 59.5
Sc02g0003760 Simmondsia chinensis HOM05D006901 ORTHO05D008582 2.3e-32 142.9 163 57.7
Prupe.8G043100 Prunus persica HOM05D006901 ORTHO05D008582 1.1e-31 140.6 156 58.3
QL02p036605 Quercus lobata HOM05D006901 ORTHO05D008582 1.6e-30 136.7 167 54.5
Manes.18G095700 Manihot esculenta HOM05D006901 ORTHO05D008582 4.8e-30 135.2 145 60.0
QL02p037117 Quercus lobata HOM05D006901 ORTHO05D008582 6.2e-30 134.8 167 53.9
Cpa.g.sc26.114 Carica papaya HOM05D006901 ORTHO05D008582 1.8e-29 133.3 183 51.9
CiPaw.16G007900 Carya illinoinensis HOM05D006901 ORTHO05D008582 1.8e-29 133.3 94 79.8
Duzib116G0108 Durio zibethinus HOM05D006901 ORTHO05D008582 2.4e-29 132.9 181 51.9
Potri.005G198100 Populus trichocarpa HOM05D006901 ORTHO05D008582 5.3e-29 131.7 186 51.6
PGR042G3646 Punica granatum HOM05D006901 ORTHO05D008582 6.9e-29 131.3 88 81.8
PGR102G0180 Punica granatum HOM05D006901 ORTHO05D008582 6.9e-29 131.3 102 72.5
Gohir.A06G111900 Gossypium hirsutum HOM05D006901 ORTHO05D008582 9.0e-29 131.0 150 56.0
Ciclev10002626m.g Citrus clementina HOM05D006901 ORTHO05D008582 1.2e-28 130.6 172 51.2
Duzib041G0277 Durio zibethinus HOM05D006901 ORTHO05D008582 1.5e-28 130.2 179 49.7
Gohir.D06G116100 Gossypium hirsutum HOM05D006901 ORTHO05D008582 2.0e-28 129.8 174 52.3
Gorai.010G133900 Gossypium raimondii HOM05D006901 ORTHO05D008582 2.0e-28 129.8 174 52.3
Ah.16g108540 Amaranthus hybridus HOM05D006901 ORTHO05D008582 2.6e-28 129.4 171 53.2
Lj5g0019877 Lotus japonicus HOM05D006901 ORTHO05D008582 3.4e-28 129.0 158 53.8
CANSAT25G0969 Cannabis sativa HOM05D006901 ORTHO05D008582 5.8e-28 128.3 101 73.3
TPR.G792 Trifolium pratense HOM05D006901 ORTHO05D008582 5.8e-28 128.3 160 53.8
TWI34G1320 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 5.8e-28 128.3 91 80.2
TWI60G0595 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 7.6e-28 127.9 101 74.3
Haze_17820 Corylus avellana HOM05D006901 ORTHO05D008582 9.9e-28 127.5 101 72.3
Phvul.007G084500 Phaseolus vulgaris HOM05D006901 ORTHO05D008582 9.9e-28 127.5 100 73.0
Potri.002G063100 Populus trichocarpa HOM05D006901 ORTHO05D008582 9.9e-28 127.5 182 50.0
Lalb_Chr21g0305611 Lupinus albus HOM05D006901 ORTHO05D008582 1.7e-27 126.7 147 58.5
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 1.7e-27 126.7 191 47.1
EL10Ac1g01620 Beta vulgaris HOM05D006901 ORTHO05D008582 2.2e-27 126.3 171 49.7
Duzib093G0981 Durio zibethinus HOM05D006901 ORTHO05D008582 2.2e-27 126.3 140 55.7
Thecc.08G162300 Theobroma cacao HOM05D006901 ORTHO05D008582 2.2e-27 126.3 146 56.2
VMungo0720G0575 Vigna mungo HOM05D006901 ORTHO05D008582 2.2e-27 126.3 100 72.0
arahy.Tifrunner.gnm1.ann1.96Y3Q8 Arachis hypogaea HOM05D006901 ORTHO05D008582 3.8e-27 125.6 101 72.3
HPP92_002865 Vanilla planifolia HOM05D006901 ORTHO05D008582 3.8e-27 125.6 176 49.4
CSS0011226 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 4.9e-27 125.2 85 78.8
CSS0025966 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 4.9e-27 125.2 85 78.8
Psat6g189960 Pisum sativum HOM05D006901 ORTHO05D008582 4.9e-27 125.2 140 58.6
TAR376G0851 Trochodendron aralioides HOM05D006901 ORTHO05D008582 4.9e-27 125.2 171 51.5
HPP92_002808 Vanilla planifolia HOM05D006901 ORTHO05D008582 6.4e-27 124.8 176 49.4
Actinidia17766 Actinidia chinensis HOM05D006901 ORTHO05D008582 1.1e-26 124.0 85 77.6
EL10Ac4g07716 Beta vulgaris HOM05D006901 ORTHO05D008582 1.1e-26 124.0 140 56.4
A07p37880 Brassica napus HOM05D006901 ORTHO05D008582 1.1e-26 124.0 166 50.6
BraA07t31353Z Brassica rapa HOM05D006901 ORTHO05D008582 1.1e-26 124.0 166 50.6
RcHm_v2.0_Chr6g0273991 Rosa chinensis HOM05D006901 ORTHO05D008582 1.1e-26 124.0 143 53.8
THA.LOC104810483 Tarenaya hassleriana HOM05D006901 ORTHO05D008582 1.1e-26 124.0 102 69.6
Dinv02470 Davidia involucrata HOM05D006901 ORTHO05D008582 1.4e-26 123.6 145 53.8
Glyma.20G171000 Glycine max HOM05D006901 ORTHO05D008582 1.4e-26 123.6 115 66.1
arahy.Tifrunner.gnm1.ann1.YZ7MCJ Arachis hypogaea HOM05D006901 ORTHO05D008582 1.9e-26 123.2 101 71.3
EL10Ac1g01617 Beta vulgaris HOM05D006901 ORTHO05D008582 1.9e-26 123.2 136 55.9
Eucgr.F02679 Eucalyptus grandis HOM05D006901 ORTHO05D008582 2.4e-26 122.9 188 48.9
Atru.chr13.1989 Acer truncatum HOM05D006901 ORTHO05D008582 4.2e-26 122.1 98 71.4
Medtr1g097570 Medicago truncatula HOM05D006901 ORTHO05D008582 4.2e-26 122.1 156 50.0
Nn6g32189 Nelumbo nucifera HOM05D006901 ORTHO05D008582 4.2e-26 122.1 94 72.3
Sabra05G0150900 Salix brachista HOM05D006901 ORTHO05D008582 4.2e-26 122.1 184 48.9
FvH4_2g12890 Fragaria vesca HOM05D006901 ORTHO05D008582 5.4e-26 121.7 89 74.2
FAN15G3138 Fragaria x ananassa HOM05D006901 ORTHO05D008582 5.4e-26 121.7 89 74.2
FAN20G0005 Fragaria x ananassa HOM05D006901 ORTHO05D008582 5.4e-26 121.7 89 74.2
FAN24G1802 Fragaria x ananassa HOM05D006901 ORTHO05D008582 5.4e-26 121.7 89 74.2
Glyma.10G220600 Glycine max HOM05D006901 ORTHO05D008582 5.4e-26 121.7 100 72.0
AT1G71730 Arabidopsis thaliana HOM05D006901 ORTHO05D008582 7.1e-26 121.3 102 69.6
Sopen04g028100 Solanum pennellii HOM05D006901 ORTHO05D008582 7.1e-26 121.3 173 51.4
Cc10_g06470 Coffea canephora HOM05D006901 ORTHO05D008582 9.3e-26 120.9 81 80.2
Aa31LG4G8920 Aethionema arabicum HOM05D006901 ORTHO05D008582 1.2e-25 120.6 102 71.6
FAN27G3188 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.2e-25 120.6 89 73.0
Solyc04g072038.1 Solanum lycopersicum HOM05D006901 ORTHO05D008582 1.2e-25 120.6 173 51.4
Ca_10653_v3 Cicer arietinum L. HOM05D006901 ORTHO05D008582 1.6e-25 120.2 138 57.2
BcaC08g46599 Brassica carinata HOM05D006901 ORTHO05D008582 2.7e-25 119.4 119 62.2
C06p45780 Brassica napus HOM05D006901 ORTHO05D008582 2.7e-25 119.4 119 62.2
BolC6t39630H Brassica oleracea HOM05D006901 ORTHO05D008582 2.7e-25 119.4 119 62.2
Rhsim06G0092600 Rhododendron simsii HOM05D006901 ORTHO05D008582 2.7e-25 119.4 86 74.4
Carub.0002s1849 Capsella rubella HOM05D006901 ORTHO05D008582 3.5e-25 119.0 156 51.3
CAN.G1183.19 Capsicum annuum HOM05D006901 ORTHO05D008582 3.5e-25 119.0 86 75.6
Actinidia15615 Actinidia chinensis HOM05D006901 ORTHO05D008582 7.9e-25 117.9 85 75.3
MSTRG.22112 Avicennia marina HOM05D006901 ORTHO05D008582 7.9e-25 117.9 86 74.4
Lj7E386T0 Lonicera japonica HOM05D006901 ORTHO05D008582 7.9e-25 117.9 86 77.9
PGSC0003DMG400025056 Solanum tuberosum HOM05D006901 ORTHO05D008582 7.9e-25 117.9 143 53.1
AL2G31300 Arabidopsis lyrata HOM05D006901 ORTHO05D008582 1.0e-24 117.5 102 68.6
Thhalv10019220m.g Eutrema salsugineum HOM05D006901 ORTHO05D008582 1.3e-24 117.1 168 48.8
PSO675G2506 Papaver somniferum HOM05D006901 ORTHO05D008582 1.3e-24 117.1 101 67.3
Hma1.2p1_0678F.1_g202120 Hydrangea macrophylla HOM05D006901 ORTHO05D008582 2.3e-24 116.3 86 72.1
SGA_v2.0_scaffold82G26198 Striga asiatica HOM05D006901 ORTHO05D008582 2.3e-24 116.3 81 79.0
GSVIVG01013704001 Vitis vinifera HOM05D006901 ORTHO05D008582 2.3e-24 116.3 161 47.8
CARHR291060 Cardamine hirsuta HOM05D006901 ORTHO05D008582 3.9e-24 115.5 97 67.0
ATR1120G022 Amborella trichopoda HOM05D006901 ORTHO05D008582 5.1e-24 115.2 86 73.3
Nn5g28858 Nelumbo nucifera HOM05D006901 ORTHO05D008582 5.1e-24 115.2 94 70.2
PSO541G2877 Papaver somniferum HOM05D006901 ORTHO05D008582 5.1e-24 115.2 101 66.3
HanXRQChr02g0041271 Helianthus annuus HOM05D006901 ORTHO05D008582 6.7e-24 114.8 83 75.9
SalBow7G3034 Salvia bowleyana HOM05D006901 ORTHO05D008582 8.7e-24 114.4 153 52.3
Sp5g26760 Schrenkiella parvula HOM05D006901 ORTHO05D008582 8.7e-24 114.4 98 69.4
Nitab4.5_0003443g0040 Nicotiana tabacum HOM05D006901 ORTHO05D008582 1.1e-23 114.0 158 50.6
Lsat_1_v5_gn_1_5120 Lactuca sativa HOM05D006901 ORTHO05D008582 2.5e-23 112.8 83 74.7
SEGI_14424 Sequoiadendron giganteum HOM05D006901 ORTHO05D008582 2.5e-23 112.8 86 72.1
ECA247G1717 Erigeron canadensis HOM05D006901 ORTHO05D008582 5.6e-23 111.7 83 71.1
Nitab4.5_0003178g0070 Nicotiana tabacum HOM05D006901 ORTHO05D008582 7.4e-23 111.3 86 73.3
Oeu017620.1 Olea europaea HOM05D006901 ORTHO05D008582 7.4e-23 111.3 85 69.4
SalBow8G2041 Salvia bowleyana HOM05D006901 ORTHO05D008582 9.6e-23 110.9 83 71.1
unitig_32.g11111 Utricularia gibba HOM05D006901 ORTHO05D008582 2.1e-22 109.8 81 74.1
Zm00001eb346910 Zea mays HOM05D006901 ORTHO05D008582 4.8e-22 108.6 126 57.1
Os05g0182000 Oryza sativa ssp. japonica HOM05D006901 ORTHO05D008582 6.2e-22 108.2 102 62.7
Pp3c17_20520 Physcomitrium patens HOM05D006901 ORTHO05D008582 2.4e-21 106.3 81 71.6
Lj5g0009364 Lotus japonicus HOM05D006901 ORTHO05D008582 9.0e-21 104.4 158 48.1
CSS0012150 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.5e-20 103.6 95 61.1
Peaxi162Scf00360g00917 Petunia axillaris HOM05D006901 ORTHO05D008582 1.5e-20 103.6 71 78.9
AagrBONN_evm.TU.Sc2ySwM_228.5132 Anthoceros agrestis HOM05D006901 ORTHO05D008582 2.9e-19 99.4 113 52.2
SMO351G0406 Selaginella moellendorffii HOM05D006901 ORTHO05D008582 4.6e-17 92.0 80 66.2
DCAR_001194 Daucus carota HOM05D006901 ORTHO05D008582 1.8e-16 90.1 64 76.6
MCO05G280 Micromonas commoda HOM05D006901 ORTHO05D008582 8.2e-14 81.3 92 52.2
CBR_g54341 Chara braunii HOM05D006901 ORTHO05D008582 1.5e-12 77.0 106 47.2
CSS0007119 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 3.4e-12 75.9 86 53.5
Cre03.g176500 Chlamydomonas reinhardtii HOM05D006901 ORTHO05D008582 1.3e-11 73.9 129 41.1
CSS0023453 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 8.4e-11 71.2 86 50.0
Ah.08g214420 Amaranthus hybridus HOM05D006901 ORTHO05D008582 1.2e-09 67.4 57 63.2


User provided reference genes

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