Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0007130 Sechium edule HOM05D007160 ORTHO05D005331 1.5e-133 479.6 243 100.0
ClCG01G023230 Citrullus lanatus HOM05D007160 ORTHO05D005331 2.5e-64 249.6 284 56.3
MELO3C007263.2 Cucumis melo HOM05D007160 ORTHO05D005331 1.3e-57 227.3 302 54.3
CsaV3_6G050380 Cucumis sativus L. HOM05D007160 ORTHO05D005331 3.9e-54 215.7 302 52.0
Sed0008189 Sechium edule HOM05D007160 ORTHO05D005331 1.4e-43 180.6 264 49.2
Duzib192G1060 Durio zibethinus HOM05D007160 ORTHO05D005331 2.9e-25 119.8 272 36.4
Cfa000523 Carpinus fangiana HOM05D007160 ORTHO05D005331 1.2e-21 107.8 246 39.0
PGR042G2677 Punica granatum HOM05D007160 ORTHO05D005331 8.3e-20 101.7 278 33.5
Duzib160G0215 Durio zibethinus HOM05D007160 ORTHO05D005331 3.5e-18 96.3 253 36.4
Haze_06386 Corylus avellana HOM05D007160 ORTHO05D005331 6.6e-17 92.0 277 35.7
Gorai.009G167000 Gossypium raimondii HOM05D007160 ORTHO05D005331 1.1e-16 91.3 256 34.8
Ca_00358_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 1.5e-16 90.9 286 29.4
Ca_30973_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 1.5e-16 90.9 286 29.4
Hma1.2p1_0558F.1_g178530 Hydrangea macrophylla HOM05D007160 ORTHO05D005331 1.5e-16 90.9 313 30.0
Ca_18588_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 2.5e-16 90.1 277 32.9
Gohir.D10G028200 Gossypium hirsutum HOM05D007160 ORTHO05D005331 2.5e-16 90.1 295 30.5
VMungo0540G2483 Vigna mungo HOM05D007160 ORTHO05D005331 5.6e-16 89.0 280 33.2
Gohir.D05G162000 Gossypium hirsutum HOM05D007160 ORTHO05D005331 7.3e-16 88.6 256 34.4
Oeu014779.1 Olea europaea HOM05D007160 ORTHO05D005331 2.8e-15 86.7 271 32.5
Duzib235G1074 Durio zibethinus HOM05D007160 ORTHO05D005331 3.1e-14 83.2 325 30.8
Gohir.A10G027800 Gossypium hirsutum HOM05D007160 ORTHO05D005331 3.1e-14 83.2 320 28.8
Phvul.006G182700 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 4.0e-14 82.8 287 32.1
Thhalv10017182m.g Eutrema salsugineum HOM05D009159 ORTHO05D005331 6.8e-14 82.0 209 33.0
Sc17g0005960 Simmondsia chinensis HOM05D028926 ORTHO05D005331 2.6e-13 80.1 269 30.1
Nitab4.5_0001375g0150 Nicotiana tabacum HOM05D007160 ORTHO05D005331 3.4e-13 79.7 85 48.2
Potri.011G057500 Populus trichocarpa HOM05D007160 ORTHO05D005331 4.4e-13 79.3 219 31.1
SalBow8G5472 Salvia bowleyana HOM05D007160 ORTHO05D005331 4.4e-13 79.3 287 31.7
SalBow8G2878 Salvia bowleyana HOM05D007160 ORTHO05D005331 5.8e-13 79.0 287 31.7
CANSAT35G1941 Cannabis sativa HOM05D007160 ORTHO05D005331 1.3e-12 77.8 254 34.3
Lj6g0014856 Lotus japonicus HOM05D007160 ORTHO05D005331 1.3e-12 77.8 320 30.0
Thecc.06G181500 Theobroma cacao HOM05D007160 ORTHO05D005331 1.3e-12 77.8 183 37.2
arahy.Tifrunner.gnm1.ann1.AUV6LD Arachis hypogaea HOM05D007160 ORTHO05D005331 1.7e-12 77.4 235 30.2
DCAR_004048 Daucus carota HOM05D007160 ORTHO05D005331 1.7e-12 77.4 131 45.0
Nitab4.5_0000516g0060 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.7e-12 77.4 85 47.1
MSTRG.13207 Avicennia marina HOM05D007160 ORTHO05D005331 2.2e-12 77.0 250 30.4
Glyma.15G077600 Glycine max HOM05D007160 ORTHO05D005331 2.2e-12 77.0 275 33.8
Medtr2g014400 Medicago truncatula HOM05D007160 ORTHO05D005331 2.2e-12 77.0 225 34.2
MSTRG.15854 Avicennia marina HOM05D007160 ORTHO05D005331 2.9e-12 76.6 301 29.6
Gorai.011G030000 Gossypium raimondii HOM05D007160 ORTHO05D005331 2.9e-12 76.6 170 37.1
Nitab4.5_0001375g0120 Nicotiana tabacum HOM05D007160 ORTHO05D005331 3.7e-12 76.3 85 47.1
DCAR_008006 Daucus carota HOM05D007160 ORTHO05D005331 4.9e-12 75.9 269 29.4
BcaB03g12106 Brassica carinata HOM05D009159 ORTHO05D005331 6.4e-12 75.5 266 31.6
AT2G33850 Arabidopsis thaliana HOM05D009159 ORTHO05D005331 1.4e-11 74.3 278 31.7
Psat1g203080 Pisum sativum HOM05D007160 ORTHO05D005331 1.4e-11 74.3 219 33.3
C03p75110 Brassica napus HOM05D009159 ORTHO05D005331 1.9e-11 73.9 255 32.5
Cc02_g13790 Coffea canephora HOM05D007160 ORTHO05D005331 1.9e-11 73.9 138 37.0
Nitab4.5_0004359g0050 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.9e-11 73.9 182 35.7
EL10Ac8g20435 Beta vulgaris HOM05D007160 ORTHO05D005331 2.4e-11 73.6 94 46.8
QL05p042103 Quercus lobata HOM05D007160 ORTHO05D005331 2.4e-11 73.6 187 39.0
QL05p042154 Quercus lobata HOM05D007160 ORTHO05D005331 2.4e-11 73.6 187 39.0
MD05G1310400 Malus domestica HOM05D007160 ORTHO05D005331 3.2e-11 73.2 334 28.1
Prupe.4G052200 Prunus persica HOM05D007160 ORTHO05D005331 3.2e-11 73.2 297 29.0
Dinv17351 Davidia involucrata HOM05D007160 ORTHO05D005331 4.1e-11 72.8 160 37.5
CARHR128000 Cardamine hirsuta HOM05D009159 ORTHO05D005331 5.4e-11 72.4 258 32.9
Nitab4.5_0001375g0140 Nicotiana tabacum HOM05D007160 ORTHO05D005331 5.4e-11 72.4 85 43.5
Nitab4.5_0000516g0070 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.2e-10 71.2 85 43.5
TPR.G19911 Trifolium pratense HOM05D007160 ORTHO05D005331 1.2e-10 71.2 355 28.2
Nitab4.5_0000516g0090 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.0e-10 70.5 85 44.7
Medtr4g088385 Medicago truncatula HOM05D007160 ORTHO05D005331 2.7e-10 70.1 369 26.6
AL4G29650 Arabidopsis lyrata HOM05D009159 ORTHO05D005331 3.5e-10 69.7 267 30.0
BcaC01g00047 Brassica carinata HOM05D009159 ORTHO05D005331 3.5e-10 69.7 260 33.1
CARHR027910 Cardamine hirsuta HOM05D009159 ORTHO05D005331 3.5e-10 69.7 256 30.9
Actinidia16571 Actinidia chinensis HOM05D007160 ORTHO05D005331 4.6e-10 69.3 86 51.2
arahy.Tifrunner.gnm1.ann1.704E4A Arachis hypogaea HOM05D007160 ORTHO05D005331 4.6e-10 69.3 242 29.8
BolC3t19771H Brassica oleracea HOM05D009159 ORTHO05D005331 4.6e-10 69.3 260 33.1
Potri.004G048301 Populus trichocarpa HOM05D007160 ORTHO05D005331 4.6e-10 69.3 230 30.0
TAR624G0339 Trochodendron aralioides HOM05D007160 ORTHO05D005331 4.6e-10 69.3 203 35.0
CiPaw.09G063200 Carya illinoinensis HOM05D007160 ORTHO05D005331 6.0e-10 68.9 254 32.3
ECA236G4287 Erigeron canadensis HOM05D007160 ORTHO05D005331 6.0e-10 68.9 276 29.7
Thhalv10008366m.g Eutrema salsugineum HOM05D009159 ORTHO05D005331 7.8e-10 68.6 270 30.4
Phvul.002G232100 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 7.8e-10 68.6 83 50.6
PGSC0003DMG400031775 Solanum tuberosum HOM05D007160 ORTHO05D005331 1.0e-09 68.2 334 26.0
Cpa.g.sc27.8 Carica papaya HOM05D007160 ORTHO05D005331 1.3e-09 67.8 321 28.3
Ciclev10016200m.g Citrus clementina HOM05D007160 ORTHO05D005331 1.3e-09 67.8 276 28.6
AL1G42030 Arabidopsis lyrata HOM05D009159 ORTHO05D005331 1.7e-09 67.4 264 29.9
CiPaw.10G052400 Carya illinoinensis HOM05D007160 ORTHO05D005331 1.7e-09 67.4 221 32.6
THA.LOC104814229 Tarenaya hassleriana HOM05D009159 ORTHO05D005331 1.7e-09 67.4 233 27.9
Sp4g16260 Schrenkiella parvula HOM05D009159 ORTHO05D005331 3.0e-09 66.6 251 31.5
THA.LOC104820566 Tarenaya hassleriana HOM05D009159 ORTHO05D005331 3.0e-09 66.6 235 28.9
Peaxi162Scf00031g00084 Petunia axillaris HOM05D007160 ORTHO05D005331 6.6e-09 65.5 352 25.3
Lalb_Chr20g0121591 Lupinus albus HOM05D007160 ORTHO05D005331 8.6e-09 65.1 239 28.9
Prupe.4G052000 Prunus persica HOM05D007160 ORTHO05D005331 1.1e-08 64.7 89 51.7
Glyma.13G175300 Glycine max HOM05D007160 ORTHO05D005331 1.5e-08 64.3 84 47.6
Sabra11G0039600 Salix brachista HOM05D007160 ORTHO05D005331 1.5e-08 64.3 256 29.7
A08p25580 Brassica napus HOM05D009159 ORTHO05D005331 1.9e-08 63.9 248 30.6
BraA08t34510Z Brassica rapa HOM05D009159 ORTHO05D005331 1.9e-08 63.9 248 30.6
Lj4g0028244 Lotus japonicus HOM05D007160 ORTHO05D005331 3.3e-08 63.2 257 31.1
Nitab4.5_0001955g0170 Nicotiana tabacum HOM05D007160 ORTHO05D005331 3.3e-08 63.2 255 29.0
Sc23g0001700 Simmondsia chinensis HOM05D028926 ORTHO05D005331 4.3e-08 62.8 271 28.8
FvH4_3g08671 Fragaria vesca HOM05D007160 ORTHO05D005331 5.6e-08 62.4 82 45.1
FAN11G0877 Fragaria x ananassa HOM05D007160 ORTHO05D005331 5.6e-08 62.4 82 45.1
SalBow8G4606 Salvia bowleyana HOM05D007160 ORTHO05D005331 5.6e-08 62.4 276 28.3
AT1G28400 Arabidopsis thaliana HOM05D009159 ORTHO05D005331 9.5e-08 61.6 278 28.1
Peaxi162Scf01018g00012 Petunia axillaris HOM05D007160 ORTHO05D005331 9.5e-08 61.6 293 29.0
Nitab4.5_0006098g0020 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.6e-07 60.8 109 38.5
Medtr2g090660 Medicago truncatula HOM05D008876 ORTHO05D010747 8.0e-07 58.5 255 28.2
PSO832G0372 Papaver somniferum HOM05D025247 ORTHO05D050219 8.0e-07 58.5 278 27.7
Sp1g24680 Schrenkiella parvula HOM05D009159 ORTHO05D005331 1.1e-06 58.2 278 29.5
TAR627G1090 Trochodendron aralioides HOM05D018497 ORTHO05D005331 1.1e-06 58.2 228 29.4
Glyma.13G236100 Glycine max HOM05D007160 ORTHO05D005331 1.4e-06 57.8 272 29.4
Lsat_1_v5_gn_7_22701 Lactuca sativa HOM05D007160 ORTHO05D005331 1.8e-06 57.4 215 30.2
Sc24g0001110 Simmondsia chinensis HOM05D028926 ORTHO05D005331 1.8e-06 57.4 230 29.1
PSO210G1528 Papaver somniferum HOM05D025247 ORTHO05D050219 2.3e-06 57.0 281 27.4
BcaB07g32463 Brassica carinata HOM05D009159 ORTHO05D005331 4.0e-06 56.2 288 28.5
Sabra04G0030300 Salix brachista HOM05D007160 ORTHO05D005331 4.0e-06 56.2 290 26.9
Nitab4.5_0003341g0030 Nicotiana tabacum HOM05D007160 ORTHO05D005331 5.2e-06 55.8 118 34.7
Gohir.A05G159300 Gossypium hirsutum HOM05D007160 ORTHO05D005331 6.8e-06 55.5 164 35.4
TWI63G1823 Tripterygium wilfordii HOM05D007160 ORTHO05D005331 6.8e-06 55.5 321 28.7
Migut.H01472 Erythranthe guttata HOM05D007160 ORTHO05D005331 8.9e-06 55.1 245 29.4
Manes.17G049000 Manihot esculenta HOM05D007160 ORTHO05D005331 8.9e-06 55.1 287 30.3


User provided reference genes

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