Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0007088 Sechium edule HOM05D005155 ORTHO05D006266 5.6e-173 610.9 321 100.0
MELO3C024180.2 Cucumis melo HOM05D005155 ORTHO05D006266 3.8e-129 465.3 317 80.8
CsaV3_7G002370 Cucumis sativus L. HOM05D005155 ORTHO05D006266 1.3e-124 450.3 317 79.2
ClCG02G003040 Citrullus lanatus HOM05D005155 ORTHO05D006266 2.8e-124 449.1 318 79.2
Ciclev10015959m.g Citrus clementina HOM05D005155 ORTHO05D006266 5.3e-91 338.6 313 61.7
Manes.13G059900 Manihot esculenta HOM05D005155 ORTHO05D006266 3.5e-90 335.9 318 59.7
CSS0035525 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 1.1e-88 330.9 320 58.8
Dinv21322 Davidia involucrata HOM05D005155 ORTHO05D006266 1.4e-88 330.5 321 60.4
Glyma.03G238300 Glycine max HOM05D005155 ORTHO05D006266 3.6e-87 325.9 339 59.0
PGR044G0745 Punica granatum HOM05D005155 ORTHO05D006266 1.1e-85 320.9 318 61.0
Haze_24928 Corylus avellana HOM05D005155 ORTHO05D006266 7.4e-85 318.2 327 59.3
Prupe.3G194600 Prunus persica HOM05D005155 ORTHO05D006266 7.4e-85 318.2 323 58.2
Rhsim04G0007200 Rhododendron simsii HOM05D005155 ORTHO05D006266 7.4e-85 318.2 310 59.7
Actinidia20603 Actinidia chinensis HOM05D005155 ORTHO05D006266 2.2e-84 316.6 321 58.3
Glyma.19G235800 Glycine max HOM05D005155 ORTHO05D006266 4.8e-84 315.5 316 60.8
Atru.chr6.3431 Acer truncatum HOM05D005155 ORTHO05D006266 2.4e-83 313.2 312 59.3
Actinidia20617 Actinidia chinensis HOM05D005155 ORTHO05D006266 7.0e-83 311.6 303 57.8
Phvul.006G092400 Phaseolus vulgaris HOM05D005155 ORTHO05D006266 9.1e-83 311.2 325 59.7
Lj4g0024217 Lotus japonicus HOM05D005155 ORTHO05D006266 5.9e-82 308.5 337 55.8
Hma1.2p1_0629F.1_g192150 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 2.9e-81 306.2 326 58.6
Gohir.D11G154600 Gossypium hirsutum HOM05D005155 ORTHO05D006266 3.8e-81 305.8 324 57.1
Lalb_Chr21g0315451 Lupinus albus HOM05D005155 ORTHO05D006266 3.8e-81 305.8 326 56.1
Actinidia24711 Actinidia chinensis HOM05D005155 ORTHO05D006266 8.5e-81 304.7 298 59.4
CSS0023894 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 1.1e-80 304.3 320 56.6
Gorai.007G164700 Gossypium raimondii HOM05D005155 ORTHO05D006266 1.1e-80 304.3 327 56.0
Cpa.g.sc136.55 Carica papaya HOM05D005155 ORTHO05D006266 1.9e-80 303.5 325 56.9
TWI75G0909 Tripterygium wilfordii HOM05D005155 ORTHO05D006266 2.5e-80 303.1 330 54.8
TPR.G3861 Trifolium pratense HOM05D005155 ORTHO05D006266 7.2e-80 301.6 346 52.6
Potri.014G170500 Populus trichocarpa HOM05D005155 ORTHO05D006266 9.4e-80 301.2 326 54.3
GSVIVG01030126001 Vitis vinifera HOM05D005155 ORTHO05D006266 9.4e-80 301.2 279 62.4
Nitab4.5_0004941g0060 Nicotiana tabacum HOM05D005155 ORTHO05D006266 2.1e-79 300.1 335 55.5
Eucgr.K01388 Eucalyptus grandis HOM05D005155 ORTHO05D006266 2.7e-79 299.7 308 57.1
Cfa014201 Carpinus fangiana HOM05D005155 ORTHO05D006266 6.1e-79 298.5 326 56.1
THA.LOC104802634 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 8.0e-79 298.1 290 60.3
Psat7g043480 Pisum sativum HOM05D005155 ORTHO05D006266 1.0e-78 297.7 323 56.3
VMungo0540G1824 Vigna mungo HOM05D005155 ORTHO05D006266 1.4e-78 297.4 327 56.0
CiPaw.04G197900 Carya illinoinensis HOM05D005155 ORTHO05D006266 3.0e-78 296.2 325 52.6
Nitab4.5_0003086g0050 Nicotiana tabacum HOM05D005155 ORTHO05D006266 4.0e-78 295.8 334 54.8
Dinv05324 Davidia involucrata HOM05D005155 ORTHO05D006266 6.8e-78 295.0 308 58.4
Duzib211G0098 Durio zibethinus HOM05D005155 ORTHO05D006266 8.8e-78 294.7 321 54.5
Thecc.01G199500 Theobroma cacao HOM05D005155 ORTHO05D006266 2.0e-77 293.5 311 55.9
Oeu022053.1 Olea europaea HOM05D005155 ORTHO05D006266 4.4e-77 292.4 314 55.1
Gorai.001G190100 Gossypium raimondii HOM05D005155 ORTHO05D006266 1.3e-76 290.8 324 54.0
Gohir.A07G163100 Gossypium hirsutum HOM05D005155 ORTHO05D006266 8.3e-76 288.1 312 53.2
Aqoxy3G04181 Aquilegia oxysepala HOM05D005155 ORTHO05D006266 1.8e-75 287.0 302 56.3
Gohir.D07G170200 Gossypium hirsutum HOM05D005155 ORTHO05D006266 1.8e-75 287.0 313 53.0
Duzib138G0133 Durio zibethinus HOM05D005155 ORTHO05D006266 4.1e-75 285.8 297 55.2
PGSC0003DMG400004112 Solanum tuberosum HOM05D005155 ORTHO05D006266 2.7e-74 283.1 340 52.6
Sopen05g001730 Solanum pennellii HOM05D005155 ORTHO05D006266 1.0e-73 281.2 347 52.7
Solyc05g005730.4 Solanum lycopersicum HOM05D005155 ORTHO05D006266 1.3e-73 280.8 353 52.1
CANSAT64G2107 Cannabis sativa HOM05D005155 ORTHO05D006266 3.8e-73 279.3 318 54.7
MD09G1131700 Malus domestica HOM05D005155 ORTHO05D006266 6.5e-73 278.5 332 53.3
Thhalv10004636m.g Eutrema salsugineum HOM05D005155 ORTHO05D006266 5.5e-72 275.4 317 51.1
arahy.Tifrunner.gnm1.ann1.ZBS9GV Arachis hypogaea HOM05D005155 ORTHO05D006266 2.7e-71 273.1 324 52.5
Haze_12586 Corylus avellana HOM05D005155 ORTHO05D006266 3.6e-71 272.7 215 67.9
TAR629G2368 Trochodendron aralioides HOM05D005155 ORTHO05D006266 6.1e-71 271.9 328 51.5
THA.LOC104819027 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 8.0e-71 271.6 314 54.5
arahy.Tifrunner.gnm1.ann1.FV1RU3 Arachis hypogaea HOM05D005155 ORTHO05D006266 1.0e-70 271.2 324 52.2
CAN.G1447.4 Capsicum annuum HOM05D005155 ORTHO05D006266 8.8e-70 268.1 332 50.6
DCAR_021083 Daucus carota HOM05D005155 ORTHO05D006266 8.8e-70 268.1 333 50.5
Peaxi162Scf00359g00214 Petunia axillaris HOM05D005155 ORTHO05D006266 1.2e-69 267.7 324 51.9
A09p04360 Brassica napus HOM05D005155 ORTHO05D006266 2.0e-69 266.9 312 51.9
Carub.0008s0781 Capsella rubella HOM05D005155 ORTHO05D006266 2.6e-69 266.5 320 50.6
Cc02_g33980 Coffea canephora HOM05D005155 ORTHO05D006266 3.4e-69 266.2 281 55.5
AL8G20970 Arabidopsis lyrata HOM05D005155 ORTHO05D006266 4.4e-69 265.8 319 49.8
TPR.G35685 Trifolium pratense HOM05D005155 ORTHO05D006266 2.2e-68 263.5 352 48.0
Lsat_1_v5_gn_0_13881 Lactuca sativa HOM05D005155 ORTHO05D006266 3.7e-68 262.7 286 54.9
C09p04670 Brassica napus HOM05D005155 ORTHO05D006266 4.8e-68 262.3 313 52.1
Aa31LG4G7530 Aethionema arabicum HOM05D005155 ORTHO05D006266 6.3e-68 261.9 318 50.0
Migut.M00065 Erythranthe guttata HOM05D005155 ORTHO05D006266 1.4e-67 260.8 332 50.9
FAN09G4460 Fragaria x ananassa HOM05D005155 ORTHO05D006266 1.4e-67 260.8 331 51.4
Sp2g18610 Schrenkiella parvula HOM05D005155 ORTHO05D006266 2.4e-67 260.0 311 49.8
Ah.08g210400 Amaranthus hybridus HOM05D005155 ORTHO05D006266 4.1e-67 259.2 300 53.3
Ah.08g219720 Amaranthus hybridus HOM05D005155 ORTHO05D006266 1.2e-66 257.7 297 51.2
AT5G48240 Arabidopsis thaliana HOM05D005155 ORTHO05D006266 1.2e-66 257.7 327 47.7
FAN02G4414 Fragaria x ananassa HOM05D005155 ORTHO05D006266 1.2e-66 257.7 331 51.1
Sc20g0004590 Simmondsia chinensis HOM05D005155 ORTHO05D006266 1.2e-66 257.7 322 50.3
unitig_26.g9470 Utricularia gibba HOM05D003767 ORTHO05D004507 3.5e-66 256.1 278 54.7
HanXRQChr01g0006811 Helianthus annuus HOM05D005155 ORTHO05D006266 4.5e-66 255.8 323 51.1
PSO782G4695 Papaver somniferum HOM05D005155 ORTHO05D006266 5.9e-66 255.4 312 50.6
BraA09t36073Z Brassica rapa HOM05D005155 ORTHO05D006266 7.7e-66 255.0 348 47.4
C07p38970 Brassica napus HOM05D005155 ORTHO05D006266 1.0e-65 254.6 323 48.6
MBI04_g26115_MAGBIO Magnolia biondii HOM05D005155 ORTHO05D006266 1.0e-65 254.6 330 50.9
BolC9t53395H Brassica oleracea HOM05D005155 ORTHO05D006266 1.3e-65 254.2 343 48.1
FvH4_6g40390 Fragaria vesca HOM05D005155 ORTHO05D006266 1.3e-65 254.2 331 50.2
FAN05G3842 Fragaria x ananassa HOM05D005155 ORTHO05D006266 8.6e-65 251.5 332 51.2
PSO210G0096 Papaver somniferum HOM05D005155 ORTHO05D006266 1.5e-64 250.8 328 48.5
BcaC04g23785 Brassica carinata HOM05D005155 ORTHO05D006266 9.5e-64 248.1 319 49.2
RcHm_v2.0_Chr2g0155591 Rosa chinensis HOM05D005155 ORTHO05D006266 1.2e-63 247.7 334 50.0
CARHR286520 Cardamine hirsuta HOM05D005155 ORTHO05D006266 1.6e-63 247.3 315 49.5
BcaB04g19566 Brassica carinata HOM05D005155 ORTHO05D006266 8.0e-63 245.0 314 48.4
AUR62030994 Chenopodium quinoa HOM05D005155 ORTHO05D006266 3.0e-62 243.0 219 60.7
Nn3g19477 Nelumbo nucifera HOM05D005155 ORTHO05D006266 3.0e-62 243.0 320 49.4
QL04p067008 Quercus lobata HOM05D005155 ORTHO05D006266 6.8e-62 241.9 498 38.2
HPP92_009941 Vanilla planifolia HOM05D005155 ORTHO05D006266 6.8e-62 241.9 323 48.6
Gohir.A11G147700 Gossypium hirsutum HOM05D005155 ORTHO05D006266 1.2e-61 241.1 287 53.0
EL10Ac5g10791 Beta vulgaris HOM05D005155 ORTHO05D006266 2.6e-61 240.0 295 52.2
SGA_v2.0_scaffold181G39700 Striga asiatica HOM05D005155 ORTHO05D006266 3.4e-61 239.6 380 44.7
CAN.G715.5 Capsicum annuum HOM05D005155 ORTHO05D006266 9.8e-61 238.0 283 52.3
A06p39310 Brassica napus HOM05D005155 ORTHO05D006266 3.7e-60 236.1 238 55.5
CARHR218550 Cardamine hirsuta HOM05D005155 ORTHO05D006266 1.4e-59 234.2 278 50.7
COL.COLO4_19654 Corchorus olitorius HOM05D005155 ORTHO05D006266 7.0e-59 231.9 172 72.7
FAN14G3535 Fragaria x ananassa HOM05D005155 ORTHO05D006266 1.2e-58 231.1 354 45.5
ECA248G0062 Erigeron canadensis HOM05D005155 ORTHO05D006266 4.5e-58 229.2 363 44.4
CDE09G0959 Ceratophyllum demersum HOM05D005155 ORTHO05D006266 3.9e-57 226.1 293 49.8
Ca_02017_v3 Cicer arietinum L. HOM05D005155 ORTHO05D006266 6.6e-57 225.3 315 49.2
SalBow7G0407 Salvia bowleyana HOM05D005155 ORTHO05D006266 6.6e-57 225.3 314 47.5
BcaC06g30816 Brassica carinata HOM05D005155 ORTHO05D006266 8.6e-57 224.9 320 45.3
MSTRG.6620 Avicennia marina HOM05D005155 ORTHO05D006266 1.2e-55 221.1 224 58.5
BraA06t26845Z Brassica rapa HOM05D005155 ORTHO05D006266 2.1e-55 220.3 275 48.7
Psat5g216800 Pisum sativum HOM05D005155 ORTHO05D006266 3.6e-55 219.5 260 53.8
Nn1g02050 Nelumbo nucifera HOM05D005155 ORTHO05D006266 1.4e-54 217.6 322 47.5
CiPaw.03G283900 Carya illinoinensis HOM05D005155 ORTHO05D006266 1.0e-49 201.4 310 48.1
ATR0225G032 Amborella trichopoda HOM05D005155 ORTHO05D006266 1.9e-48 197.2 316 43.7
MD17G1119200 Malus domestica HOM05D005155 ORTHO05D006266 2.1e-47 193.7 252 49.2
Os11g0266000 Oryza sativa ssp. japonica HOM05D005155 ORTHO05D006266 1.1e-46 191.4 200 52.5
BolC7t44418H Brassica oleracea HOM05D005155 ORTHO05D006266 1.2e-45 188.0 152 65.1
Zm00001eb298370 Zea mays HOM05D005155 ORTHO05D006266 2.0e-45 187.2 201 55.7
Lj1A800T38 Lonicera japonica HOM05D005155 ORTHO05D006266 1.9e-40 170.6 304 41.4
SEGI_31719 Sequoiadendron giganteum HOM05D005155 ORTHO05D006266 4.3e-40 169.5 221 48.4
Cc00_g18660 Coffea canephora HOM05D005155 ORTHO05D006266 1.5e-37 161.0 112 74.1
PSO782G5585 Papaver somniferum HOM05D005155 ORTHO05D006266 1.7e-36 157.5 287 40.1
Cc00_g14350 Coffea canephora HOM05D005155 ORTHO05D006266 1.4e-35 154.5 114 71.1
Cc07_g20190 Coffea canephora HOM05D005155 ORTHO05D006266 1.0e-33 148.3 111 72.1
Nn1g02049 Nelumbo nucifera HOM05D005155 ORTHO05D006266 5.1e-33 146.0 182 50.5
PSO782G0752 Papaver somniferum HOM05D005155 ORTHO05D006266 9.6e-32 141.7 233 42.5
QL01p014609 Quercus lobata HOM05D005155 ORTHO05D006266 1.8e-30 137.5 116 66.4
AUR62008242 Chenopodium quinoa HOM05D005155 ORTHO05D006266 2.4e-30 137.1 152 52.0
AagrBONN_evm.TU.Sc2ySwM_368.2873 Anthoceros agrestis HOM05D005155 ORTHO05D006266 7.8e-26 122.1 202 40.6
Cc07_g20180 Coffea canephora HOM05D005155 ORTHO05D006266 1.6e-23 114.4 104 59.6
Mapoly0148s0006 Marchantia polymorpha HOM05D005155 ORTHO05D006266 1.9e-19 100.9 218 35.8
MD17G1119400 Malus domestica HOM05D005155 ORTHO05D006266 2.7e-18 97.1 82 65.9
Hma1.2p1_1388F.1_g279940 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 6.0e-18 95.9 67 68.7
CBR_g23113 Chara braunii HOM05D005155 ORTHO05D006266 3.3e-16 90.1 187 38.0
Cc00_g29960 Coffea canephora HOM05D005155 ORTHO05D006266 4.3e-16 89.7 88 58.0
Pp3c22_320 Physcomitrium patens HOM05D005155 ORTHO05D006266 7.3e-16 89.0 188 34.0
Pp3c22_322 Physcomitrium patens HOM05D005155 ORTHO05D006266 7.3e-16 89.0 188 34.0
QL03p064628 Quercus lobata HOM05D005155 ORTHO05D006266 3.1e-14 83.6 323 30.7
Lj1A800T39 Lonicera japonica HOM05D005155 ORTHO05D006266 3.5e-10 70.1 51 72.5
QL03p064635 Quercus lobata HOM05D005155 ORTHO05D006266 1.8e-09 67.8 61 63.9
PRCOL_00000835 Prasinoderma coloniale HOM05D005155 ORTHO05D006266 2.5e-08 63.9 160 35.0
A02p30930 Brassica napus HOM05D005155 ORTHO05D006266 4.3e-08 63.2 66 53.0


User provided reference genes

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