Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0007067 Sechium edule HOM05D006426 ORTHO05D007737 1.8e-246 855.5 446 100.0
ClCG02G017320 Citrullus lanatus HOM05D006426 ORTHO05D007737 4.1e-190 668.3 461 78.3
CsaV3_6G012420 Cucumis sativus L. HOM05D006426 ORTHO05D007737 9.4e-179 630.6 461 74.0
MELO3C013535.2 Cucumis melo HOM05D006426 ORTHO05D007737 1.4e-177 626.7 458 73.4
Sed0009175 Sechium edule HOM05D006426 ORTHO05D007737 7.9e-101 371.7 385 59.5
Cfa014544 Carpinus fangiana HOM05D006426 ORTHO05D007737 1.0e-95 354.8 463 49.2
Haze_13087 Corylus avellana HOM05D006426 ORTHO05D007737 1.9e-94 350.5 467 49.5
QL08p037311 Quercus lobata HOM05D006426 ORTHO05D007737 7.1e-94 348.6 477 49.1
Prupe.3G231100 Prunus persica HOM05D006426 ORTHO05D007737 1.0e-87 328.2 471 49.0
MD09G1096400 Malus domestica HOM05D006426 ORTHO05D007737 9.4e-86 321.6 472 48.1
MD17G1084500 Malus domestica HOM05D006426 ORTHO05D007737 1.0e-84 318.2 469 48.0
Thecc.02G171600 Theobroma cacao HOM05D006426 ORTHO05D007737 1.4e-84 317.8 475 47.4
Gorai.005G205500 Gossypium raimondii HOM05D006426 ORTHO05D007737 5.1e-84 315.8 473 46.9
Gohir.D02G183100 Gossypium hirsutum HOM05D006426 ORTHO05D007737 2.5e-83 313.5 473 46.5
Gohir.A03G160000 Gossypium hirsutum HOM05D006426 ORTHO05D007737 2.2e-82 310.5 473 46.3
CiPaw.04G122700 Carya illinoinensis HOM05D006426 ORTHO05D007737 3.7e-82 309.7 469 46.7
COL.COLO4_13683 Corchorus olitorius HOM05D006426 ORTHO05D007737 8.2e-82 308.5 477 46.5
Dinv15495 Davidia involucrata HOM05D006426 ORTHO05D007737 1.0e-79 301.6 486 45.9
RcHm_v2.0_Chr2g0161781 Rosa chinensis HOM05D006426 ORTHO05D007737 1.0e-79 301.6 467 47.1
TWI36G1326 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 3.8e-79 299.7 473 43.8
Duzib248G1395 Durio zibethinus HOM05D006426 ORTHO05D007737 4.2e-78 296.2 474 44.3
Duzib132G0414 Durio zibethinus HOM05D006426 ORTHO05D007737 7.2e-78 295.4 470 44.0
Actinidia12458 Actinidia chinensis HOM05D006426 ORTHO05D007737 2.7e-77 293.5 469 44.3
FAN02G4384 Fragaria x ananassa HOM05D006426 ORTHO05D007737 2.7e-77 293.5 464 47.0
FAN09G0359 Fragaria x ananassa HOM05D006426 ORTHO05D007737 3.6e-77 293.1 464 46.8
Nitab4.5_0001871g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 3.6e-77 293.1 494 44.5
TWI75G1119 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 6.7e-76 288.9 474 43.9
TWI18G0136 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 1.5e-75 287.7 471 42.7
FvH4_6g44570 Fragaria vesca HOM05D006426 ORTHO05D007737 5.7e-75 285.8 464 46.1
FAN14G1414 Fragaria x ananassa HOM05D006426 ORTHO05D007737 5.7e-75 285.8 464 46.1
Manes.13G151600 Manihot esculenta HOM05D006426 ORTHO05D007737 2.8e-74 283.5 467 45.0
Sopen07g028590 Solanum pennellii HOM05D006426 ORTHO05D007737 1.7e-71 274.2 494 42.5
Hma1.2p1_0565F.1_g179550 Hydrangea macrophylla HOM05D006426 ORTHO05D007737 2.2e-71 273.9 459 46.2
Cpa.g.sc34.90 Carica papaya HOM05D006426 ORTHO05D007737 2.9e-71 273.5 479 44.5
Cc05_g06260 Coffea canephora HOM05D006426 ORTHO05D007737 2.9e-71 273.5 500 43.0
TAR627G1051 Trochodendron aralioides HOM05D006426 ORTHO05D007737 2.9e-71 273.5 468 43.4
Ciclev10015289m.g Citrus clementina HOM05D006426 ORTHO05D007737 3.8e-71 273.1 468 45.3
Sabra13G0119100 Salix brachista HOM05D006426 ORTHO05D007737 3.8e-71 273.1 462 43.7
PGSC0003DMG400018371 Solanum tuberosum HOM05D006426 ORTHO05D007737 3.8e-71 273.1 494 42.7
Nitab4.5_0002370g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 6.5e-71 272.3 493 42.2
Rhsim06G0152100 Rhododendron simsii HOM05D006426 ORTHO05D007737 8.5e-71 271.9 497 41.9
Solyc07g054690.1 Solanum lycopersicum HOM05D006426 ORTHO05D007737 3.2e-70 270.0 493 41.8
CAN.G508.22 Capsicum annuum HOM05D006426 ORTHO05D007737 4.2e-70 269.6 487 43.7
Peaxi162Scf00007g00272 Petunia axillaris HOM05D006426 ORTHO05D007737 4.2e-70 269.6 483 41.6
Potri.013G147500 Populus trichocarpa HOM05D006426 ORTHO05D007737 5.5e-70 269.2 464 43.8
Manes.12G083000 Manihot esculenta HOM05D006426 ORTHO05D007737 3.6e-69 266.5 473 41.4
Actinidia09902 Actinidia chinensis HOM05D006426 ORTHO05D007737 2.3e-68 263.8 464 42.9
PGR042G3565 Punica granatum HOM05D006426 ORTHO05D007737 2.6e-67 260.4 478 42.3
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 7.4e-67 258.8 477 41.7
Potri.019G116200 Populus trichocarpa HOM05D006426 ORTHO05D007737 4.8e-66 256.1 464 41.8
THA.LOC104804065 Tarenaya hassleriana HOM05D006426 ORTHO05D007737 1.1e-65 255.0 433 43.4
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 7.0e-65 252.3 482 40.7
Thhalv10025277m.g Eutrema salsugineum HOM05D006426 ORTHO05D007737 3.5e-64 250.0 461 43.0
Sabra19G0136500 Salix brachista HOM05D006426 ORTHO05D007737 3.5e-64 250.0 463 41.9
Sabra19G0117200 Salix brachista HOM05D006426 ORTHO05D007737 7.7e-64 248.8 463 41.7
Nn1g03877 Nelumbo nucifera HOM05D006426 ORTHO05D007737 1.7e-63 247.7 474 41.6
EL10Ac9g20938 Beta vulgaris HOM05D006426 ORTHO05D007737 8.5e-63 245.4 484 40.9
Sp7g26190 Schrenkiella parvula HOM05D006426 ORTHO05D007737 4.2e-62 243.0 452 41.4
Oeu025481.1 Olea europaea HOM05D006426 ORTHO05D007737 1.2e-61 241.5 522 39.3
MSTRG.14180 Avicennia marina HOM05D006426 ORTHO05D007737 2.1e-61 240.7 490 41.4
AL7G24370 Arabidopsis lyrata HOM05D006426 ORTHO05D007737 6.1e-61 239.2 436 42.2
TAR626G1919 Trochodendron aralioides HOM05D006426 ORTHO05D007737 1.8e-60 237.7 466 39.7
AT4G28230 Arabidopsis thaliana HOM05D006426 ORTHO05D007737 5.2e-60 236.1 435 41.6
Carub.0007s1253 Capsella rubella HOM05D006426 ORTHO05D007737 6.8e-60 235.7 437 41.9
CARHR235940 Cardamine hirsuta HOM05D006426 ORTHO05D007737 2.0e-59 234.2 460 42.0
Oeu018075.1 Olea europaea HOM05D006426 ORTHO05D007737 4.4e-59 233.0 491 39.3
A01p19640 Brassica napus HOM05D006426 ORTHO05D007737 5.0e-55 219.5 446 40.8
TAR629G2656 Trochodendron aralioides HOM05D006426 ORTHO05D007737 6.5e-55 219.2 427 39.3
BcaNung01587 Brassica carinata HOM05D006426 ORTHO05D007737 7.2e-54 215.7 445 40.9
Aa31LG2G22090 Aethionema arabicum HOM05D006426 ORTHO05D007737 9.4e-54 215.3 437 39.4
Migut.H01020 Erythranthe guttata HOM05D006426 ORTHO05D007737 9.4e-54 215.3 497 39.6
Lj8P117T60 Lonicera japonica HOM05D006426 ORTHO05D007737 2.1e-53 214.2 348 44.5
BraA01t01897Z Brassica rapa HOM05D006426 ORTHO05D007737 4.7e-53 213.0 443 39.3
DCAR_009725 Daucus carota HOM05D006426 ORTHO05D007737 1.0e-52 211.8 474 38.4
PSO832G1174 Papaver somniferum HOM05D006426 ORTHO05D007737 1.8e-52 211.1 470 39.8
PSO210G4394 Papaver somniferum HOM05D006426 ORTHO05D007737 3.0e-52 210.3 470 38.5
Sc06g0009150 Simmondsia chinensis HOM05D006426 ORTHO05D007737 8.8e-52 208.8 469 37.3
Eucgr.A01776 Eucalyptus grandis HOM05D006426 ORTHO05D007737 2.2e-50 204.1 425 40.9
arahy.Tifrunner.gnm1.ann1.512YGT Arachis hypogaea HOM05D006426 ORTHO05D007737 2.8e-50 203.8 490 35.5
BolC1t02416H Brassica oleracea HOM05D006426 ORTHO05D007737 4.9e-50 203.0 445 39.1
C01p24670 Brassica napus HOM05D006426 ORTHO05D007737 6.3e-50 202.6 445 39.1
arahy.Tifrunner.gnm1.ann1.2866YZ Arachis hypogaea HOM05D006426 ORTHO05D007737 2.4e-49 200.7 491 35.2
Atru.chr6.3076 Acer truncatum HOM05D006426 ORTHO05D007737 3.1e-49 200.3 315 46.0
BcaC09g50504 Brassica carinata HOM05D006426 ORTHO05D007737 2.0e-48 197.6 446 38.3
Aqoxy1G03895 Aquilegia oxysepala HOM05D006426 ORTHO05D007737 1.1e-46 191.8 532 34.4
SalBow1G4632 Salvia bowleyana HOM05D006426 ORTHO05D007737 1.9e-46 191.0 465 39.4
SGA_v2.0_scaffold49G18304 Striga asiatica HOM05D006426 ORTHO05D007737 1.9e-46 191.0 479 37.2
unitig_52.g17339 Utricularia gibba HOM05D006426 ORTHO05D007737 7.5e-43 179.1 463 36.7
MBI18_g45419_MAGBIO Magnolia biondii HOM05D006426 ORTHO05D007737 7.8e-40 169.1 484 34.1
DCAR_012977 Daucus carota HOM05D006426 ORTHO05D007737 1.3e-39 168.3 454 33.9
Lsat_1_v5_gn_4_69460 Lactuca sativa HOM05D006426 ORTHO05D007737 2.8e-37 160.6 481 33.3
Lj3g0000273 Lotus japonicus HOM05D006426 ORTHO05D007737 6.1e-37 159.5 462 32.0
ECA232G2383 Erigeron canadensis HOM05D006426 ORTHO05D007737 1.3e-34 151.8 474 34.2
PSO675G8522 Papaver somniferum HOM05D006426 ORTHO05D007737 4.9e-34 149.8 494 32.8
Lalb_Chr01g0017281 Lupinus albus HOM05D006426 ORTHO05D007737 4.1e-33 146.7 418 34.0
HanXRQChr15g0488091 Helianthus annuus HOM05D006426 ORTHO05D007737 1.9e-30 137.9 460 33.0
PSO541G1576 Papaver somniferum HOM05D006426 ORTHO05D007737 1.9e-30 137.9 495 31.5
Glyma.11G158800 Glycine max HOM05D006426 ORTHO05D007737 9.5e-30 135.6 444 33.6
VMungo1080G0900 Vigna mungo HOM05D006426 ORTHO05D007737 1.2e-29 135.2 447 33.3
Glyma.04G132700 Glycine max HOM05D006426 ORTHO05D007737 1.1e-28 132.1 435 33.1
Phvul.005G017100 Phaseolus vulgaris HOM05D006426 ORTHO05D007737 1.8e-28 131.3 441 33.3
SGA_v2.0_scaffold159G37625 Striga asiatica HOM05D006426 ORTHO05D007737 1.9e-25 121.3 330 35.8
Medtr3g013540 Medicago truncatula HOM05D006426 ORTHO05D007737 1.9e-22 111.3 465 31.2
Psat5g223040 Pisum sativum HOM05D006426 ORTHO05D007737 3.3e-22 110.5 449 29.6
ATR0693G210 Amborella trichopoda HOM05D006426 ORTHO05D007737 1.6e-21 108.2 529 31.0
TPR.G1458 Trifolium pratense HOM05D006426 ORTHO05D007737 1.6e-21 108.2 465 31.6
Lj1P736T39 Lonicera japonica HOM05D006426 ORTHO05D007737 3.4e-19 100.5 174 47.1
FvH4_6g44594 Fragaria vesca HOM05D006426 ORTHO05D007737 5.8e-19 99.8 173 43.4
Ca_18074_v3 Cicer arietinum L. HOM05D006426 ORTHO05D007737 3.7e-18 97.1 441 30.6
CDE10G0475 Ceratophyllum demersum HOM05D006426 ORTHO05D007737 8.6e-15 85.9 487 26.9
unitig_62.g23190 Utricularia gibba HOM05D006426 ORTHO05D007737 2.6e-11 74.3 165 38.8
HPP92_011117 Vanilla planifolia HOM05D006426 ORTHO05D007737 5.8e-11 73.2 353 29.5
HPP92_011122 Vanilla planifolia HOM05D006426 ORTHO05D007737 5.8e-11 73.2 334 27.5
GSVIVG01030006001 Vitis vinifera HOM05D006426 ORTHO05D007737 2.9e-10 70.9 156 37.2
Oeu029930.1 Olea europaea HOM05D006426 ORTHO05D007737 1.1e-09 68.9 150 36.0
Oeu035359.1 Olea europaea HOM05D006426 ORTHO05D007737 4.2e-09 67.0 150 36.0
Oeu003230.1 Olea europaea HOM05D006426 ORTHO05D007737 1.0e-07 62.4 150 35.3
Atru.chr6.3075 Acer truncatum HOM05D006426 ORTHO05D007737 1.9e-06 58.2 68 45.6
SabraUnG0004200 Salix brachista HOM05D006426 ORTHO05D007737 7.3e-06 56.2 91 41.8


User provided reference genes

Program Settings