Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0007062 Sechium edule HOM05D007692 ORTHO05D009696 7.6e-36 153.3 77 100.0
ClCG05G015760 Citrullus lanatus HOM05D007692 ORTHO05D009696 4.2e-18 94.4 57 78.9
CsaV3_4G036060 Cucumis sativus L. HOM05D007692 ORTHO05D009696 1.6e-17 92.4 57 78.9
MELO3C016914.2 Cucumis melo HOM05D007692 ORTHO05D009696 2.1e-17 92.0 55 80.0
Sed0007061 Sechium edule HOM05D007692 ORTHO05D009696 3.3e-15 84.7 55 72.7
QL02p017055 Quercus lobata HOM05D007692 ORTHO05D009696 3.6e-09 64.7 55 54.5
Cpa.g.sc126.21 Carica papaya HOM05D007692 ORTHO05D009696 1.0e-08 63.2 51 58.8
MD15G1049600 Malus domestica HOM05D007692 ORTHO05D009696 1.8e-08 62.4 55 54.5
QL02p017043 Quercus lobata HOM05D007692 ORTHO05D009696 1.8e-08 62.4 55 52.7
Manes.16G085800 Manihot esculenta HOM05D007692 ORTHO05D009696 5.1e-08 60.8 49 59.2
FvH4_2g30960 Fragaria vesca HOM05D007692 ORTHO05D009696 1.5e-07 59.3 55 54.5
MD08G1071600 Malus domestica HOM05D007692 ORTHO05D009696 2.6e-07 58.5 54 50.0
Nn8g39911 Nelumbo nucifera HOM05D007692 ORTHO05D009696 2.6e-07 58.5 51 54.9
Sabra06G0170400 Salix brachista HOM05D007692 ORTHO05D009696 2.6e-07 58.5 52 57.7
TAR624G0897 Trochodendron aralioides HOM05D007692 ORTHO05D009696 3.3e-07 58.2 57 50.9
HPP92_004156 Vanilla planifolia HOM05D007692 ORTHO05D009696 3.3e-07 58.2 50 58.0
Prupe.1G403900 Prunus persica HOM05D007692 ORTHO05D009696 4.4e-07 57.8 55 50.9
Duzib168G1711 Durio zibethinus HOM05D007692 ORTHO05D009696 5.7e-07 57.4 49 59.2
MBI13_g42817_MAGBIO Magnolia biondii HOM05D007692 ORTHO05D009696 5.7e-07 57.4 50 56.0
Thecc.09G063700 Theobroma cacao HOM05D007692 ORTHO05D009696 5.7e-07 57.4 49 59.2
SGA_v2.0_scaffold20G09157 Striga asiatica HOM05D006390 ORTHO05D007899 7.4e-07 57.0 49 55.1
Zm00001eb005780 Zea mays HOM05D007692 ORTHO05D009696 7.4e-07 57.0 54 51.9
DCAR_001232 Daucus carota HOM05D006390 ORTHO05D007899 9.7e-07 56.6 49 53.1
Os03g0176900 Oryza sativa ssp. japonica HOM05D007692 ORTHO05D009696 9.7e-07 56.6 50 58.0
Dinv22937 Davidia involucrata HOM05D007692 ORTHO05D009696 1.3e-06 56.2 54 50.0
RcHm_v2.0_Chr6g0311901 Rosa chinensis HOM05D007692 ORTHO05D009696 1.3e-06 56.2 50 56.0
Potri.006G220500 Populus trichocarpa HOM05D007692 ORTHO05D009696 1.7e-06 55.8 49 55.1
TWI63G1278 Tripterygium wilfordii HOM05D007692 ORTHO05D009696 1.7e-06 55.8 50 56.0
Nn2g12400 Nelumbo nucifera HOM05D007692 ORTHO05D009696 2.2e-06 55.5 54 51.9
Solyc08g061640.1 Solanum lycopersicum HOM05D007692 ORTHO05D009696 2.2e-06 55.5 48 58.3
Sopen08g017100 Solanum pennellii HOM05D007692 ORTHO05D009696 2.2e-06 55.5 48 58.3
PGSC0003DMG400045083 Solanum tuberosum HOM05D007692 ORTHO05D009696 2.2e-06 55.5 48 58.3
CAN.G567.82 Capsicum annuum HOM05D007692 ORTHO05D009696 2.8e-06 55.1 48 58.3
Ciclev10010178m.g Citrus clementina HOM05D007692 ORTHO05D009696 2.8e-06 55.1 44 56.8
PGR031G0311 Punica granatum HOM05D007692 ORTHO05D009696 2.8e-06 55.1 46 56.5
unitig_32.g11527 Utricularia gibba HOM05D007692 ORTHO05D009696 2.8e-06 55.1 51 51.0
CANSAT25G1329 Cannabis sativa HOM05D007692 ORTHO05D009696 3.7e-06 54.7 41 63.4
Peaxi162Scf00486g00102 Petunia axillaris HOM05D007692 ORTHO05D009696 3.7e-06 54.7 47 57.4
BcaB08g36470 Brassica carinata HOM05D007692 ORTHO05D009696 8.2e-06 53.5 45 60.0
Nitab4.5_0008422g0010 Nicotiana tabacum HOM05D007692 ORTHO05D009696 8.2e-06 53.5 48 56.2
VMungo0647G2522 Vigna mungo HOM05D007692 ORTHO05D009696 8.2e-06 53.5 50 54.0


User provided reference genes

Program Settings