Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 5.5e-231 803.9 397 100.0
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 1.3e-200 703.0 398 87.9
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 8.1e-198 693.7 398 87.4
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 1.2e-190 669.8 397 85.9
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 3.0e-168 595.5 388 75.8
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 6.7e-168 594.3 395 74.4
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 6.7e-168 594.3 396 77.0
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 1.6e-166 589.7 374 79.1
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 3.7e-166 588.6 391 74.7
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 4.8e-166 588.2 390 76.7
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 8.1e-166 587.4 388 75.0
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 1.4e-165 586.6 398 73.4
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 4.0e-165 585.1 396 75.0
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 5.3e-165 584.7 374 78.1
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 5.3e-165 584.7 392 74.0
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 9.0e-165 583.9 396 75.0
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 1.5e-164 583.2 396 75.0
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 2.0e-164 582.8 396 73.0
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 2.6e-164 582.4 341 82.1
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 2.2e-163 579.3 339 82.6
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 2.9e-163 578.9 396 74.2
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 6.4e-163 577.8 394 74.9
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 1.1e-162 577.0 399 73.4
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 1.4e-162 576.6 382 73.8
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 1.4e-162 576.6 376 76.3
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 4.2e-162 575.1 390 73.1
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 4.2e-162 575.1 392 72.4
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 7.1e-162 574.3 355 77.5
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 9.3e-162 573.9 370 75.1
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 2.7e-161 572.4 395 71.9
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 2.7e-161 572.4 365 77.3
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 4.6e-161 571.6 399 71.4
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 6.0e-161 571.2 372 74.5
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 1.3e-160 570.1 392 71.9
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 1.8e-160 569.7 387 72.4
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 1.8e-160 569.7 388 72.7
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 2.3e-160 569.3 397 71.8
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 3.0e-160 568.9 349 78.8
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 3.9e-160 568.5 392 73.0
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 3.9e-160 568.5 392 73.0
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 5.1e-160 568.2 392 72.2
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 5.1e-160 568.2 392 72.2
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 5.1e-160 568.2 382 72.8
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 5.1e-160 568.2 365 77.8
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 5.1e-160 568.2 397 71.8
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 6.7e-160 567.8 392 71.9
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 8.7e-160 567.4 404 70.0
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 8.7e-160 567.4 338 81.1
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 1.5e-159 566.6 395 71.9
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 1.9e-159 566.2 357 77.6
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 1.9e-159 566.2 382 72.8
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 2.5e-159 565.8 338 80.5
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 2.5e-159 565.8 341 79.5
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 2.5e-159 565.8 400 72.2
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 3.3e-159 565.5 414 69.8
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 5.6e-159 564.7 392 71.9
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 5.6e-159 564.7 395 72.7
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 5.6e-159 564.7 357 77.6
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 5.6e-159 564.7 396 71.5
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 1.6e-158 563.1 387 73.4
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 1.6e-158 563.1 337 81.0
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 1.6e-158 563.1 337 81.0
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 1.6e-158 563.1 332 81.0
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 2.1e-158 562.8 385 72.2
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 6.2e-158 561.2 403 70.2
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 6.2e-158 561.2 393 71.0
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 8.2e-158 560.8 370 73.8
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 1.1e-157 560.5 392 71.9
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 1.4e-157 560.1 398 71.1
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 1.4e-157 560.1 386 72.3
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 1.8e-157 559.7 370 73.2
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 2.6e-156 555.8 336 78.9
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 2.6e-156 555.8 380 72.6
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 3.4e-156 555.4 354 76.3
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 7.6e-156 554.3 354 76.0
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 1.0e-155 553.9 410 68.8
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 1.3e-155 553.5 394 70.3
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 1.7e-155 553.1 392 69.9
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 2.2e-155 552.7 338 79.0
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 4.2e-154 548.5 365 72.6
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 7.1e-154 547.7 446 63.5
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 7.1e-154 547.7 377 72.9
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 1.2e-153 547.0 332 80.4
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 1.0e-152 543.9 335 77.3
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 6.7e-152 541.2 383 70.8
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 8.7e-152 540.8 349 76.2
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 5.7e-151 538.1 404 66.8
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 2.2e-150 536.2 329 77.5
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 2.4e-149 532.7 330 76.1
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 5.3e-149 531.6 376 69.7
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 6.9e-149 531.2 338 74.3
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 6.9e-149 531.2 421 66.3
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 5.9e-148 528.1 393 67.9
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 1.2e-145 520.4 299 83.9
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 3.3e-143 512.3 372 70.2
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 3.4e-140 502.3 371 67.9
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 1.7e-139 500.0 388 67.0
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 2.9e-139 499.2 400 64.2
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 1.2e-137 493.8 380 67.6
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 1.4e-136 490.3 425 62.1
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 3.0e-136 489.2 279 83.9
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 1.0e-131 474.2 305 75.1
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 5.0e-131 471.9 356 66.0
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 4.7e-129 465.3 324 67.6
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 4.4e-127 458.8 323 69.3
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 8.2e-126 454.5 337 65.6
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 3.2e-122 442.6 321 66.4
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 4.1e-117 425.6 308 70.8
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 9.8e-111 404.4 316 64.9
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 4.8e-110 402.1 282 69.1
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 5.5e-106 388.7 268 74.6
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 1.4e-88 330.9 295 53.6
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 5.4e-85 318.9 291 54.3
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 3.5e-84 316.2 302 50.3
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 3.6e-81 306.2 301 57.5
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 4.3e-74 282.7 186 73.7
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 3.5e-68 263.1 181 76.2
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 9.9e-55 218.4 187 61.0
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 2.8e-49 200.3 130 68.5
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 4.3e-42 176.4 133 69.2
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 5.7e-34 149.4 102 72.5
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 4.8e-25 119.8 131 53.4
Oeu063625.1 Olea europaea HOM05D006216 ORTHO05D007760 1.1e-21 108.6 125 48.8
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 1.6e-20 104.8 184 36.4
SMO198G0007 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 3.6e-20 103.6 105 52.4
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 3.9e-19 100.1 64 75.0
DCAR_006325 Daucus carota HOM05D006216 ORTHO05D007760 3.5e-15 87.0 50 74.0


User provided reference genes

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