Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0006891 Sechium edule HOM05D006036 ORTHO05D007736 3.0e-125 451.8 222 100.0
Sed0014119 Sechium edule HOM05D006036 ORTHO05D007736 7.9e-102 374.0 227 81.1
CsaV3_6G006160 Cucumis sativus L. HOM05D006036 ORTHO05D007736 2.2e-99 365.9 226 77.9
TWI14G1308 Tripterygium wilfordii HOM05D006036 ORTHO05D007736 6.7e-85 317.8 226 71.2
Gohir.A08G134500 Gossypium hirsutum HOM05D006036 ORTHO05D007736 8.8e-85 317.4 223 70.9
CiPaw.01G261900 Carya illinoinensis HOM05D006036 ORTHO05D007736 1.3e-83 313.5 222 70.3
Duzib133G1287 Durio zibethinus HOM05D006036 ORTHO05D007736 2.8e-83 312.4 225 70.2
Cc02_g36690 Coffea canephora HOM05D006036 ORTHO05D007736 3.7e-83 312.0 221 67.9
Thecc.01G376100 Theobroma cacao HOM05D006036 ORTHO05D007736 1.4e-82 310.1 227 67.8
Oeu037915.1 Olea europaea HOM05D006036 ORTHO05D007736 4.1e-82 308.5 228 67.5
Ah.16g109830 Amaranthus hybridus HOM05D006036 ORTHO05D007736 5.3e-82 308.1 225 68.4
Eucgr.E01417 Eucalyptus grandis HOM05D006036 ORTHO05D007736 5.3e-82 308.1 180 80.0
Aqoxy7G00627 Aquilegia oxysepala HOM05D006036 ORTHO05D007736 2.0e-81 306.2 221 68.8
Cpa.g.sc349.4 Carica papaya HOM05D006036 ORTHO05D007736 2.6e-81 305.8 222 68.0
FAN03G0372 Fragaria x ananassa HOM05D006036 ORTHO05D007736 3.5e-81 305.4 224 68.3
QL08p052466 Quercus lobata HOM05D006036 ORTHO05D007736 5.9e-81 304.7 225 67.1
RcHm_v2.0_Chr1g0350591 Rosa chinensis HOM05D006036 ORTHO05D007736 5.9e-81 304.7 231 65.8
Hund17020 Selenicereus undatus HOM05D006036 ORTHO05D007736 7.7e-81 304.3 193 72.0
FAN10G3538 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.0e-80 303.9 227 66.5
Prupe.2G145700 Prunus persica HOM05D006036 ORTHO05D007736 1.3e-80 303.5 224 68.8
Sc02g0002580 Simmondsia chinensis HOM05D006036 ORTHO05D007736 1.3e-80 303.5 224 66.5
FAN01G0425 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.7e-80 303.1 222 67.1
AUR62013628 Chenopodium quinoa HOM05D006036 ORTHO05D007736 3.8e-80 302.0 209 68.9
MSTRG.4890 Avicennia marina HOM05D006036 ORTHO05D007736 1.5e-79 300.1 227 67.0
Nn1g01232 Nelumbo nucifera HOM05D006036 ORTHO05D007736 1.5e-79 300.1 224 67.0
HanXRQChr16g0520241 Helianthus annuus HOM05D006036 ORTHO05D007736 1.9e-79 299.7 227 66.1
Lsat_1_v5_gn_4_40940 Lactuca sativa HOM05D006036 ORTHO05D007736 2.5e-79 299.3 234 62.8
FvH4_7g11910 Fragaria vesca HOM05D006036 ORTHO05D007736 3.2e-79 298.9 227 66.5
DCAR_031531 Daucus carota HOM05D006036 ORTHO05D007736 4.2e-79 298.5 204 70.1
Cfa001720 Carpinus fangiana HOM05D006036 ORTHO05D007736 5.5e-79 298.1 222 66.2
Haze_16816 Corylus avellana HOM05D006036 ORTHO05D007736 5.5e-79 298.1 222 66.7
Glyma.01G142900 Glycine max HOM05D006036 ORTHO05D007736 9.4e-79 297.4 226 65.9
GSVIVG01027612001 Vitis vinifera HOM05D006036 ORTHO05D007736 1.2e-78 297.0 222 66.2
EL10Ac1g00899 Beta vulgaris HOM05D006036 ORTHO05D007736 1.6e-78 296.6 229 64.2
MBI04_g35276_MAGBIO Magnolia biondii HOM05D006036 ORTHO05D007736 1.6e-78 296.6 202 68.8
Medtr4g023550 Medicago truncatula HOM05D006036 ORTHO05D007736 2.1e-78 296.2 222 66.7
Lj3g0008791 Lotus japonicus HOM05D006036 ORTHO05D007736 2.7e-78 295.8 225 66.7
Psat7g231640 Pisum sativum HOM05D006036 ORTHO05D007736 2.7e-78 295.8 226 65.0
Sabra02G0117300 Salix brachista HOM05D006036 ORTHO05D007736 2.7e-78 295.8 215 67.9
Actinidia12688 Actinidia chinensis HOM05D006036 ORTHO05D007736 3.6e-78 295.4 222 68.0
Dinv32378 Davidia involucrata HOM05D006036 ORTHO05D007736 3.6e-78 295.4 205 69.8
Sabra02G0115600 Salix brachista HOM05D006036 ORTHO05D007736 8.0e-78 294.3 215 67.4
SalBow5G3583 Salvia bowleyana HOM05D006036 ORTHO05D007736 8.0e-78 294.3 228 63.6
CANSAT56G2189 Cannabis sativa HOM05D006036 ORTHO05D007736 1.8e-77 293.1 225 66.2
TPR.G9852 Trifolium pratense HOM05D006036 ORTHO05D007736 2.3e-77 292.7 172 80.2
Manes.05G045200 Manihot esculenta HOM05D006036 ORTHO05D007736 5.2e-77 291.6 183 76.5
Solyc01g091360.4 Solanum lycopersicum HOM05D006036 ORTHO05D007736 6.7e-77 291.2 226 64.6
unitig_8.g4983 Utricularia gibba HOM05D006036 ORTHO05D007736 6.7e-77 291.2 176 76.7
Glyma.03G023900 Glycine max HOM05D006036 ORTHO05D007736 8.8e-77 290.8 223 65.0
Glyma.14G070200 Glycine max HOM05D006036 ORTHO05D007736 8.8e-77 290.8 223 65.0
PGR042G0035 Punica granatum HOM05D006036 ORTHO05D007736 8.8e-77 290.8 234 64.1
SalBow5G0783 Salvia bowleyana HOM05D006036 ORTHO05D007736 8.8e-77 290.8 228 63.2
Sopen01g037100 Solanum pennellii HOM05D006036 ORTHO05D007736 8.8e-77 290.8 200 69.0
ECA234G4399 Erigeron canadensis HOM05D006036 ORTHO05D007736 2.0e-76 289.7 240 60.0
Ca_03013_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 3.3e-76 288.9 225 65.8
Potri.002G148400 Populus trichocarpa HOM05D006036 ORTHO05D007736 3.3e-76 288.9 194 70.1
CDE02G2016 Ceratophyllum demersum HOM05D006036 ORTHO05D007736 4.4e-76 288.5 212 66.0
Rhsim01G0147400 Rhododendron simsii HOM05D006036 ORTHO05D007736 7.5e-76 287.7 183 76.0
Lj9A569G50 Lonicera japonica HOM05D006036 ORTHO05D007736 9.7e-76 287.3 210 67.1
PGSC0003DMG400012774 Solanum tuberosum HOM05D006036 ORTHO05D007736 1.3e-75 287.0 223 65.0
Lalb_Chr07g0189801 Lupinus albus HOM05D006036 ORTHO05D007736 1.7e-75 286.6 222 65.3
MD02G1204100 Malus domestica HOM05D006036 ORTHO05D007736 1.7e-75 286.6 231 65.8
Atru.chr5.310 Acer truncatum HOM05D006036 ORTHO05D007736 4.8e-75 285.0 208 69.2
Phvul.010G084400 Phaseolus vulgaris HOM05D006036 ORTHO05D007736 4.1e-74 282.0 225 64.0
arahy.Tifrunner.gnm1.ann1.B3VI1A Arachis hypogaea HOM05D006036 ORTHO05D007736 7.7e-73 277.7 179 72.6
Glyma.08G286100 Glycine max HOM05D006036 ORTHO05D007736 1.0e-72 277.3 220 63.6
Carub.0005s2756 Capsella rubella HOM05D006036 ORTHO05D007736 6.5e-72 274.6 222 64.9
CARHR171200 Cardamine hirsuta HOM05D006036 ORTHO05D007736 1.5e-71 273.5 224 62.9
SEGI_01363 Sequoiadendron giganteum HOM05D006036 ORTHO05D007736 2.5e-71 272.7 174 69.5
AL5G43130 Arabidopsis lyrata HOM05D006036 ORTHO05D007736 4.2e-71 271.9 222 62.6
BcaC07g42642 Brassica carinata HOM05D006036 ORTHO05D007736 1.6e-70 270.0 223 63.7
ClCG06G000370 Citrullus lanatus HOM05D006036 ORTHO05D007736 2.1e-70 269.6 225 64.4
BcaC07g40602 Brassica carinata HOM05D006036 ORTHO05D007736 3.6e-70 268.9 223 64.6
A09p53070 Brassica napus HOM05D006036 ORTHO05D007736 3.6e-70 268.9 223 64.6
C08p35770 Brassica napus HOM05D006036 ORTHO05D007736 3.6e-70 268.9 222 64.4
THA.LOC104802443 Tarenaya hassleriana HOM05D006036 ORTHO05D007736 6.1e-70 268.1 224 62.1
AT3G60810 Arabidopsis thaliana HOM05D006036 ORTHO05D007736 8.0e-70 267.7 222 63.5
CSS0022013 Camellia sinensis var. sinensis HOM05D006036 ORTHO05D007736 8.0e-70 267.7 222 61.3
Aa31LG10G15050 Aethionema arabicum HOM05D006036 ORTHO05D007736 1.4e-69 266.9 222 63.5
CSS0011162 Camellia sinensis var. sinensis HOM05D006036 ORTHO05D007736 1.8e-69 266.5 168 74.4
BolC8t51167H Brassica oleracea HOM05D006036 ORTHO05D007736 2.3e-69 266.2 223 63.7
ATR0810G113 Amborella trichopoda HOM05D006036 ORTHO05D007736 3.0e-69 265.8 170 71.2
Sp5g02440 Schrenkiella parvula HOM05D006036 ORTHO05D007736 5.2e-69 265.0 222 63.1
Zm00001eb210410 Zea mays HOM05D006036 ORTHO05D007736 5.2e-69 265.0 180 67.2
AUR62004220 Chenopodium quinoa HOM05D006036 ORTHO05D007736 1.2e-68 263.8 173 69.4
Ciclev10022362m.g Citrus clementina HOM05D006036 ORTHO05D007736 2.0e-68 263.1 156 77.6
BraA09t40733Z Brassica rapa HOM05D006036 ORTHO05D007736 4.8e-67 258.5 222 62.6
Medtr7g074920 Medicago truncatula HOM05D006036 ORTHO05D007736 4.8e-67 258.5 224 58.0
Thhalv10006234m.g Eutrema salsugineum HOM05D006036 ORTHO05D007736 1.1e-66 257.3 222 61.7
Mapoly0007s0216 Marchantia polymorpha HOM05D006036 ORTHO05D007736 4.1e-66 255.4 178 66.3
Nitab4.5_0005372g0020 Nicotiana tabacum HOM05D006036 ORTHO05D007736 4.1e-66 255.4 226 60.2
FAN10G0738 Fragaria x ananassa HOM05D006036 ORTHO05D007736 9.1e-66 254.2 189 64.6
Os03g0858700 Oryza sativa ssp. japonica HOM05D006036 ORTHO05D007736 3.5e-65 252.3 172 68.0
Pp3c23_9860 Physcomitrium patens HOM05D006036 ORTHO05D007736 1.0e-64 250.8 209 57.4
vmacro21009 Vaccinium macrocarpon HOM05D006036 ORTHO05D007736 2.9e-64 249.2 160 73.1
vmacro21008 Vaccinium macrocarpon HOM05D006036 ORTHO05D007736 1.5e-63 246.9 155 74.8
arahy.Tifrunner.gnm1.ann1.Y8TVDJ Arachis hypogaea HOM05D006036 ORTHO05D007736 3.6e-62 242.3 158 71.5
AagrBONN_evm.TU.Sc2ySwM_117.1558 Anthoceros agrestis HOM05D006036 ORTHO05D007736 1.8e-61 240.0 170 63.5
PSO782G0421 Papaver somniferum HOM05D006036 ORTHO05D007736 6.8e-61 238.0 227 56.4
Hma1.2p1_1122F.1_g259290 Hydrangea macrophylla HOM05D006036 ORTHO05D007736 2.6e-60 236.1 174 65.5
PSO478G2400 Papaver somniferum HOM05D006036 ORTHO05D007736 5.7e-60 235.0 231 54.5
Gohir.D08G155400 Gossypium hirsutum HOM05D006036 ORTHO05D007736 9.8e-60 234.2 179 65.9
VMungo0251G0926 Vigna mungo HOM05D006036 ORTHO05D007736 8.3e-59 231.1 226 55.3
SMO143G0045 Selaginella moellendorffii HOM05D006036 ORTHO05D007736 5.4e-58 228.4 152 64.5
MELO3C035247.2 Cucumis melo HOM05D006036 ORTHO05D007736 7.3e-55 218.0 113 91.2
VMungo0331G0186 Vigna mungo HOM05D006036 ORTHO05D007736 1.4e-53 213.8 256 49.2
SGA_v2.0_scaffold153G37014 Striga asiatica HOM05D006036 ORTHO05D001464 2.6e-52 209.5 219 52.1
Cre11.g468750 Chlamydomonas reinhardtii HOM05D006036 ORTHO05D007736 4.4e-52 208.8 190 53.7
COL.COLO4_12549 Corchorus olitorius HOM05D006036 ORTHO05D007736 1.8e-50 203.4 169 62.7
Nitab4.5_0000457g0290 Nicotiana tabacum HOM05D006036 ORTHO05D007736 5.0e-48 195.3 216 51.9
Peaxi162Scf00021g01720 Petunia axillaris HOM05D006036 ORTHO05D007736 1.1e-42 177.6 113 74.3
CAN.G388.12 Capsicum annuum HOM05D006036 ORTHO05D007736 7.8e-41 171.4 111 72.1
Glyma.09G269100 Glycine max HOM05D006036 ORTHO05D007736 4.7e-38 162.2 119 67.2
FAN06G1700 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.8e-37 160.2 95 78.9
MELO3C034959.2 Cucumis melo HOM05D006036 ORTHO05D007736 4.0e-37 159.1 112 72.3
Migut.N01635 Erythranthe guttata HOM05D006036 ORTHO05D007736 1.5e-36 157.1 138 60.9
Lalb_Chr03g0039561 Lupinus albus HOM05D006036 ORTHO05D007736 6.4e-35 151.8 131 59.5
MCO13G087 Micromonas commoda HOM05D006036 ORTHO05D007736 9.2e-34 147.9 160 46.2
Ca_07819_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 1.3e-32 144.1 95 70.5
Ca_19909_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 8.6e-32 141.4 92 70.7
FAN06G2896 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.2e-30 137.5 76 80.3
CBR_g54966 Chara braunii HOM05D006036 ORTHO05D007736 1.6e-30 137.1 84 72.6
Ciclev10033315m.g Citrus clementina HOM05D006036 ORTHO05D007736 4.9e-27 125.6 144 50.0
Gorai.007G091200 Gossypium raimondii HOM05D001611 ORTHO05D001464 8.4e-27 124.8 70 82.9
Gohir.D11G085366 Gossypium hirsutum HOM05D001611 ORTHO05D001464 1.0e-24 117.9 70 78.6
Lalb_Chr03g0039551 Lupinus albus HOM05D006036 ORTHO05D007736 4.0e-21 105.9 80 62.5
Psat3g116040 Pisum sativum HOM05D006036 ORTHO05D007736 4.9e-19 99.0 64 70.3
Lj1g0011795 Lotus japonicus HOM05D006036 ORTHO05D007736 1.9e-18 97.1 54 79.6
arahy.Tifrunner.gnm1.ann1.WD24C8 Arachis hypogaea HOM05D006036 ORTHO05D007736 2.5e-15 86.7 62 64.5
Gorai.004G161600 Gossypium raimondii HOM05D006036 ORTHO05D007736 1.3e-14 84.3 67 61.2
arahy.Tifrunner.gnm1.ann1.BW32E7 Arachis hypogaea HOM05D006036 ORTHO05D000587 1.5e-12 77.4 59 62.7


User provided reference genes

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