Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0006890 Sechium edule HOM05D000314 ORTHO05D000189 3.2e-139 498.4 255 100.0
ClCG01G001750 Citrullus lanatus HOM05D000314 ORTHO05D000189 2.3e-52 209.9 318 44.0
MELO3C005763.2 Cucumis melo HOM05D000314 ORTHO05D000189 1.5e-51 207.2 194 61.3
CsaV3_5G001890 Cucumis sativus L. HOM05D000314 ORTHO05D000189 4.7e-50 202.2 194 60.3
Sed0017176 Sechium edule HOM05D000314 ORTHO05D000189 1.7e-44 183.7 195 56.4
Duzib068G0347 Durio zibethinus HOM05D000314 ORTHO05D000189 4.4e-32 142.5 197 46.7
Dinv37511 Davidia involucrata HOM05D000314 ORTHO05D000189 3.8e-31 139.4 204 44.1
GSVIVG01019562001 Vitis vinifera HOM05D000314 ORTHO05D000189 9.3e-30 134.8 229 45.4
QL02p030010 Quercus lobata HOM05D000314 ORTHO05D000189 3.0e-28 129.8 347 34.3
COL.COLO4_10732 Corchorus olitorius HOM05D000314 ORTHO05D000189 3.9e-28 129.4 214 41.1
Actinidia22178 Actinidia chinensis HOM05D000314 ORTHO05D000189 2.5e-27 126.7 204 42.2
CSS0012730 Camellia sinensis var. sinensis HOM05D000314 ORTHO05D000189 5.6e-27 125.6 224 40.2
CSS0015651 Camellia sinensis var. sinensis HOM05D000314 ORTHO05D000189 9.6e-27 124.8 221 39.8
Eucgr.D01761 Eucalyptus grandis HOM05D000314 ORTHO05D000189 1.3e-26 124.4 205 44.4
Ciclev10020737m.g Citrus clementina HOM05D000314 ORTHO05D000189 2.8e-26 123.2 200 44.0
Gohir.A11G025400 Gossypium hirsutum HOM05D000314 ORTHO05D000189 2.8e-26 123.2 196 43.9
Cc08_g16300 Coffea canephora HOM05D000314 ORTHO05D000189 1.4e-25 120.9 383 30.8
Gohir.D11G025050 Gossypium hirsutum HOM05D000314 ORTHO05D000189 2.4e-25 120.2 194 42.8
Manes.02G007900 Manihot esculenta HOM05D000314 ORTHO05D000189 2.4e-25 120.2 204 41.2
Lj8C206T9 Lonicera japonica HOM05D000314 ORTHO05D000189 3.1e-25 119.8 351 33.3
Thecc.03G301100 Theobroma cacao HOM05D000314 ORTHO05D000189 3.1e-25 119.8 229 38.0
vmacro11543 Vaccinium macrocarpon HOM05D000314 ORTHO05D000189 3.1e-25 119.8 372 31.2
CiPaw.11G118800 Carya illinoinensis HOM05D000314 ORTHO05D000189 4.0e-25 119.4 209 44.0
Sabra03G0102400 Salix brachista HOM05D000314 ORTHO05D000189 4.0e-25 119.4 203 39.9
Gorai.007G026800 Gossypium raimondii HOM05D000314 ORTHO05D000189 1.2e-24 117.9 199 42.7
Cpa.g.sc634.5 Carica papaya HOM05D000314 ORTHO05D000189 2.0e-24 117.1 191 44.5
Nitab4.5_0008496g0010 Nicotiana tabacum HOM05D000314 ORTHO05D000189 5.8e-24 115.5 228 37.3
Potri.003G141800 Populus trichocarpa HOM05D000314 ORTHO05D000189 5.8e-24 115.5 214 41.1
PGR031G0289 Punica granatum HOM05D000314 ORTHO05D000189 7.6e-24 115.2 202 44.1
Sp2g00250 Schrenkiella parvula HOM05D000314 ORTHO05D000189 7.6e-24 115.2 190 40.0
FAN18G1660 Fragaria x ananassa HOM05D000314 ORTHO05D000189 2.2e-23 113.6 360 30.8
Nn3g18973 Nelumbo nucifera HOM05D000314 ORTHO05D000189 2.2e-23 113.6 216 43.5
Sc22g0004880 Simmondsia chinensis HOM05D000314 ORTHO05D000189 3.8e-23 112.8 194 44.3
SalBow8G1547 Salvia bowleyana HOM05D000314 ORTHO05D000189 4.9e-23 112.5 192 41.7
Haze_09093 Corylus avellana HOM05D000314 ORTHO05D000189 6.4e-23 112.1 369 32.0
FvH4_5g04960 Fragaria vesca HOM05D000314 ORTHO05D000189 6.4e-23 112.1 360 30.3
Oeu038553.1 Olea europaea HOM05D000314 ORTHO05D000189 8.4e-23 111.7 347 31.4
Cfa011980 Carpinus fangiana HOM05D000314 ORTHO05D000189 1.4e-22 110.9 369 32.0
FAN08G0549 Fragaria x ananassa HOM05D000314 ORTHO05D000189 1.4e-22 110.9 360 30.6
Nitab4.5_0000798g0090 Nicotiana tabacum HOM05D000314 ORTHO05D000189 1.4e-22 110.9 231 35.5
Migut.E01279 Erythranthe guttata HOM05D000314 ORTHO05D000189 1.9e-22 110.5 354 30.2
FAN04G3141 Fragaria x ananassa HOM05D000314 ORTHO05D000189 1.9e-22 110.5 361 30.2
Potri.001G088900 Populus trichocarpa HOM05D000314 ORTHO05D000189 3.2e-22 109.8 203 38.9
FAN13G0361 Fragaria x ananassa HOM05D000314 ORTHO05D000189 4.2e-22 109.4 205 39.0
FAN18G3375 Fragaria x ananassa HOM05D000314 ORTHO05D000189 4.2e-22 109.4 205 39.0
Prupe.5G123100 Prunus persica HOM05D000314 ORTHO05D000189 4.2e-22 109.4 372 30.1
MSTRG.13891 Avicennia marina HOM05D000314 ORTHO05D000189 9.3e-22 108.2 193 39.4
CAN.G567.17 Capsicum annuum HOM05D000314 ORTHO05D000189 9.3e-22 108.2 243 37.0
Solyc08g082590.3 Solanum lycopersicum HOM05D000314 ORTHO05D000189 9.3e-22 108.2 226 36.7
SGA_v2.0_scaffold111G31396 Striga asiatica HOM05D000314 ORTHO05D000189 9.3e-22 108.2 199 40.7
Thhalv10023539m.g Eutrema salsugineum HOM05D000314 ORTHO05D000189 1.6e-21 107.5 364 28.8
Atru.chr9.1930 Acer truncatum HOM05D000314 ORTHO05D000189 2.1e-21 107.1 353 29.2
Rhsim02G0247000 Rhododendron simsii HOM05D000314 ORTHO05D000189 2.7e-21 106.7 365 28.8
Sopen08g030840 Solanum pennellii HOM05D000314 ORTHO05D000189 3.5e-21 106.3 222 36.0
TAR375G0309 Trochodendron aralioides HOM05D000314 ORTHO05D000189 3.5e-21 106.3 210 40.0
PGSC0003DMG400012263 Solanum tuberosum HOM05D000314 ORTHO05D000189 7.9e-21 105.1 225 36.4
MD06G1110300 Malus domestica HOM05D000314 ORTHO05D000189 1.0e-20 104.8 217 36.4
Peaxi162Scf00074g00633 Petunia axillaris HOM05D000314 ORTHO05D000189 1.0e-20 104.8 373 30.3
Hma1.2p1_0440F.1_g153480 Hydrangea macrophylla HOM05D000314 ORTHO05D000189 1.3e-20 104.4 236 36.4
ECA246G1577 Erigeron canadensis HOM05D000314 ORTHO05D000189 1.8e-20 104.0 358 30.2
Aqoxy5G04269 Aquilegia oxysepala HOM05D000314 ORTHO05D000189 3.0e-20 103.2 361 31.0
RcHm_v2.0_Chr7g0194111 Rosa chinensis HOM05D000314 ORTHO05D000189 3.0e-20 103.2 363 28.4
C09p17740 Brassica napus HOM05D000314 ORTHO05D000189 2.5e-19 100.1 362 28.7
BolC9t54668H Brassica oleracea HOM05D000314 ORTHO05D000189 2.5e-19 100.1 362 28.7
Glyma.05G218400 Glycine max HOM05D000314 ORTHO05D000189 5.6e-19 99.0 192 38.0
BcaC04g22574 Brassica carinata HOM05D000314 ORTHO05D000189 7.4e-19 98.6 362 28.2
BcaB07g31469 Brassica carinata HOM05D000314 ORTHO05D000189 9.6e-19 98.2 202 38.1
Lalb_Chr05g0224001 Lupinus albus HOM05D000314 ORTHO05D000189 9.6e-19 98.2 200 38.0
TWI81G1054 Tripterygium wilfordii HOM05D000314 ORTHO05D000189 9.6e-19 98.2 194 39.2
PSO017G5204 Papaver somniferum HOM05D000314 ORTHO05D000189 2.1e-18 97.1 202 37.6
AL2G10300 Arabidopsis lyrata HOM05D000314 ORTHO05D000189 6.2e-18 95.5 359 27.6
Aa31LG2G1500 Aethionema arabicum HOM05D000314 ORTHO05D000189 1.4e-17 94.4 206 34.5
A09p14660 Brassica napus HOM05D000314 ORTHO05D000189 1.4e-17 94.4 363 27.3
MBI06_g13419_MAGBIO Magnolia biondii HOM05D003753 ORTHO05D005081 1.4e-17 94.4 194 36.6
AT1G64500 Arabidopsis thaliana HOM05D000314 ORTHO05D000189 1.8e-17 94.0 359 27.0
CANSAT21G1681 Cannabis sativa HOM05D000314 ORTHO05D000189 1.8e-17 94.0 195 38.5
BraA09t37112Z Brassica rapa HOM05D000314 ORTHO05D000189 2.4e-17 93.6 363 27.3
Lsat_1_v5_gn_3_11340 Lactuca sativa HOM05D000314 ORTHO05D000189 3.1e-17 93.2 364 29.1
CARHR046450 Cardamine hirsuta HOM05D000314 ORTHO05D000189 4.0e-17 92.8 358 27.4
Carub.0002s0025 Capsella rubella HOM05D000314 ORTHO05D000189 1.5e-16 90.9 361 26.9
Ca_17464_v3 Cicer arietinum L. HOM05D000314 ORTHO05D000189 2.0e-16 90.5 194 34.5
Lj4g0003524 Lotus japonicus HOM05D000314 ORTHO05D000189 5.8e-16 89.0 188 34.0
PSO478G3404 Papaver somniferum HOM05D000314 ORTHO05D000189 7.6e-16 88.6 213 35.2
Phvul.002G300200 Phaseolus vulgaris HOM05D000314 ORTHO05D000189 1.3e-15 87.8 340 27.9
VMungo0251G0238 Vigna mungo HOM05D000314 ORTHO05D000189 1.3e-15 87.8 187 36.4
EL10Ac5g12941 Beta vulgaris HOM05D000314 ORTHO05D000189 2.9e-15 86.7 209 34.0
THA.LOC104825229 Tarenaya hassleriana HOM05D000314 ORTHO05D000189 2.5e-14 83.6 191 35.6
ATR0602G080 Amborella trichopoda HOM05D000314 ORTHO05D000189 3.2e-14 83.2 216 35.2
unitig_60.g25598 Utricularia gibba HOM05D000314 ORTHO05D000189 7.1e-14 82.0 197 35.0
HanXRQChr17g0534991 Helianthus annuus HOM05D000314 ORTHO05D000189 9.3e-14 81.6 354 26.3
Ah.03g135490 Amaranthus hybridus HOM05D000314 ORTHO05D000189 1.2e-13 81.3 205 33.2
Medtr8g099665 Medicago truncatula HOM05D000314 ORTHO05D000189 3.5e-13 79.7 189 34.4
Psat7g024800 Pisum sativum HOM05D000314 ORTHO05D000189 7.9e-13 78.6 187 32.1
DCAR_029868 Daucus carota HOM05D000314 ORTHO05D000189 5.7e-11 72.4 214 32.2
AUR62019867 Chenopodium quinoa HOM05D000314 ORTHO05D000189 4.1e-09 66.2 328 24.1
Actinidia04179 Actinidia chinensis HOM05D000314 ORTHO05D000189 5.3e-09 65.9 83 42.2
AUR62010865 Chenopodium quinoa HOM05D000314 ORTHO05D000189 1.0e-07 61.6 197 28.9
Sabra01G0065100 Salix brachista HOM05D000314 ORTHO05D000189 2.2e-07 60.5 111 36.9
HPP92_003872 Vanilla planifolia HOM05D000314 ORTHO05D000189 2.2e-07 60.5 89 39.3


User provided reference genes

Program Settings