Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0006870 Sechium edule HOM05D025894 ORTHO05D010081 0.0e+00 1273.1 968 100.0
ClCG05G004780 Citrullus lanatus HOM05D025894 ORTHO05D010081 1.3e-161 574.7 996 51.3
MELO3C006492.2 Cucumis melo HOM05D025894 ORTHO05D010081 1.1e-134 485.3 996 50.6
CsaV3_3G012810 Cucumis sativus L. HOM05D025894 ORTHO05D010081 2.6e-133 480.7 997 47.0
QL06p000574 Quercus lobata HOM05D008144 ORTHO05D010081 3.5e-21 108.2 463 29.4
Potri.008G159200 Populus trichocarpa HOM05D008144 ORTHO05D010081 6.0e-21 107.5 509 27.3
Atru.chr4.2325 Acer truncatum HOM05D008144 ORTHO05D010081 6.7e-20 104.0 357 32.5
Sabra08G0121300 Salix brachista HOM05D008144 ORTHO05D010081 1.9e-19 102.4 175 40.0
Potri.010G081000 Populus trichocarpa HOM05D008144 ORTHO05D010081 1.3e-18 99.8 176 40.3
Prupe.1G023500 Prunus persica HOM05D008144 ORTHO05D010081 1.6e-18 99.4 531 27.5
Thecc.04G241000 Theobroma cacao HOM05D008144 ORTHO05D010081 1.4e-17 96.3 494 28.9
CANSAT78G0891 Cannabis sativa HOM05D008144 ORTHO05D010081 4.5e-16 91.3 486 28.8
Duzib151G0265 Durio zibethinus HOM05D008144 ORTHO05D010081 9.9e-16 90.1 173 36.4
Manes.03G171900 Manihot esculenta HOM05D008144 ORTHO05D010081 1.3e-15 89.7 359 29.0
Duzib212G0503 Durio zibethinus HOM05D008144 ORTHO05D010081 4.9e-15 87.8 474 26.8
FAN12G1940 Fragaria x ananassa HOM05D008144 ORTHO05D010081 4.2e-14 84.7 562 25.4
FAN22G0807 Fragaria x ananassa HOM05D008144 ORTHO05D010081 5.5e-14 84.3 558 24.9
MD13G1201700 Malus domestica HOM05D008144 ORTHO05D010081 5.5e-14 84.3 494 26.5
FAN17G0986 Fragaria x ananassa HOM05D008144 ORTHO05D010081 1.2e-13 83.2 552 26.8
FAN17G1249 Fragaria x ananassa HOM05D008144 ORTHO05D010081 1.2e-13 83.2 552 26.8
Haze_11249 Corylus avellana HOM05D008144 ORTHO05D010081 2.1e-13 82.4 448 25.7
Medtr1g041300 Medicago truncatula HOM05D008144 ORTHO05D010081 2.7e-13 82.0 257 31.5
Ciclev10004664m.g Citrus clementina HOM05D008144 ORTHO05D010081 1.0e-12 80.1 217 33.2
Dinv14059 Davidia involucrata HOM05D008144 ORTHO05D010081 1.0e-12 80.1 454 27.3
Gohir.A02G034700 Gossypium hirsutum HOM05D008144 ORTHO05D010081 1.3e-12 79.7 175 37.1
Gohir.D02G041500 Gossypium hirsutum HOM05D008144 ORTHO05D010081 1.3e-12 79.7 175 37.1
Gorai.005G045900 Gossypium raimondii HOM05D008144 ORTHO05D010081 1.3e-12 79.7 175 37.1
FvH4_4g01740 Fragaria vesca HOM05D008144 ORTHO05D010081 3.0e-12 78.6 559 25.6
RcHm_v2.0_Chr4g0388601 Rosa chinensis HOM05D008144 ORTHO05D010081 3.0e-12 78.6 546 25.3
VMungo0720G0769 Vigna mungo HOM05D008144 ORTHO05D010081 5.1e-12 77.8 367 26.4
CiPaw.01G194000 Carya illinoinensis HOM05D008144 ORTHO05D010081 8.7e-12 77.0 473 25.4
COL.COLO4_13184 Corchorus olitorius HOM05D008144 ORTHO05D010081 1.5e-11 76.3 379 27.7
Glyma.02G002200 Glycine max HOM05D008144 ORTHO05D010081 5.6e-11 74.3 211 32.2
MD16G1202000 Malus domestica HOM05D008144 ORTHO05D010081 9.6e-11 73.6 242 31.0
TPR.G32783 Trifolium pratense HOM05D008144 ORTHO05D010081 3.7e-10 71.6 350 28.3
Lalb_Chr03g0037551 Lupinus albus HOM05D008144 ORTHO05D010081 8.2e-10 70.5 204 31.9
Phvul.007G278800 Phaseolus vulgaris HOM05D008144 ORTHO05D010081 1.1e-09 70.1 304 26.3
GSVIVG01018069001 Vitis vinifera HOM05D008144 ORTHO05D010081 4.0e-09 68.2 171 32.2
CSS0041819 Camellia sinensis var. sinensis HOM05D008144 ORTHO05D010081 5.3e-09 67.8 457 26.7
Cpa.g.sc44.134 Carica papaya HOM05D008144 ORTHO05D010081 1.5e-08 66.2 458 26.4
Dinv44593 Davidia involucrata HOM05D008144 ORTHO05D010081 5.8e-08 64.3 514 24.9
Psat6g103240 Pisum sativum HOM05D008144 ORTHO05D010081 1.3e-07 63.2 316 27.8
Nitab4.5_0000224g0080 Nicotiana tabacum HOM05D014400 ORTHO05D010081 8.4e-07 60.5 177 31.6
TWI73G1171 Tripterygium wilfordii HOM05D008144 ORTHO05D010081 2.5e-06 58.9 194 32.5


User provided reference genes

Program Settings