Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0006840 Sechium edule HOM05D007264 ORTHO05D008639 4.1e-79 298.1 167 100.0
ClCG02G019960 Citrullus lanatus HOM05D007264 ORTHO05D008639 5.5e-31 138.3 161 62.1
MELO3C025896.2 Cucumis melo HOM05D007264 ORTHO05D008639 3.0e-29 132.5 171 59.6
Haze_24148 Corylus avellana HOM05D007264 ORTHO05D008639 2.4e-26 122.9 165 52.7
QL01p030632 Quercus lobata HOM05D007264 ORTHO05D008639 9.1e-26 120.9 167 53.9
Cfa011538 Carpinus fangiana HOM05D007264 ORTHO05D008639 6.5e-24 114.8 164 52.4
arahy.Tifrunner.gnm1.ann1.EHGE9H Arachis hypogaea HOM05D007264 ORTHO05D008639 8.5e-24 114.4 108 64.8
Cc01_g13240 Coffea canephora HOM05D007264 ORTHO05D008639 8.5e-24 114.4 158 54.4
PGSC0003DMG400014567 Solanum tuberosum HOM05D007264 ORTHO05D008639 1.9e-23 113.2 168 51.8
Ciclev10029397m.g Citrus clementina HOM05D007264 ORTHO05D008639 2.5e-23 112.8 120 63.3
TAR560G0010 Trochodendron aralioides HOM05D007264 ORTHO05D008639 4.2e-23 112.1 169 50.9
TAR623G1366 Trochodendron aralioides HOM05D007264 ORTHO05D008639 4.2e-23 112.1 169 50.9
arahy.Tifrunner.gnm1.ann1.4DS88F Arachis hypogaea HOM05D007264 ORTHO05D008639 5.5e-23 111.7 124 59.7
CsaV3_6G016660 Cucumis sativus L. HOM05D007264 ORTHO05D008639 7.2e-23 111.3 131 58.8
Peaxi162Scf00038g02028 Petunia axillaris HOM05D007264 ORTHO05D008639 9.4e-23 110.9 96 71.9
RcHm_v2.0_Chr5g0066101 Rosa chinensis HOM05D007264 ORTHO05D008639 9.4e-23 110.9 177 50.3
Nn8g40679 Nelumbo nucifera HOM05D007264 ORTHO05D008639 1.6e-22 110.2 166 49.4
PGR119G0519 Punica granatum HOM05D007264 ORTHO05D008639 2.7e-22 109.4 173 48.0
Lsat_1_v5_gn_5_169441 Lactuca sativa HOM05D007264 ORTHO05D008639 4.7e-22 108.6 162 48.8
MD11G1096000 Malus domestica HOM05D007264 ORTHO05D008639 6.1e-22 108.2 154 51.3
CSS0034107 Camellia sinensis var. sinensis HOM05D007264 ORTHO05D008639 8.0e-22 107.8 168 51.2
Prupe.6G071500 Prunus persica HOM05D007264 ORTHO05D008639 8.0e-22 107.8 168 47.6
Gorai.001G112100 Gossypium raimondii HOM05D007264 ORTHO05D008639 1.0e-21 107.5 174 50.0
Nitab4.5_0006942g0010 Nicotiana tabacum HOM05D007264 ORTHO05D008639 1.0e-21 107.5 120 56.7
Eucgr.J02035 Eucalyptus grandis HOM05D007264 ORTHO05D008639 1.4e-21 107.1 169 50.9
MBI14_g08028_MAGBIO Magnolia biondii HOM05D007264 ORTHO05D008639 1.4e-21 107.1 152 53.3
Migut.D00885 Erythranthe guttata HOM05D007264 ORTHO05D008639 1.8e-21 106.7 169 51.5
Gohir.D07G104200 Gossypium hirsutum HOM05D007264 ORTHO05D008639 1.8e-21 106.7 176 50.0
FAN25G3374 Fragaria x ananassa HOM05D007264 ORTHO05D008639 2.3e-21 106.3 175 47.4
Solyc05g009300.1 Solanum lycopersicum HOM05D007264 ORTHO05D008639 3.0e-21 105.9 165 48.5
FvH4_3g36880 Fragaria vesca HOM05D007264 ORTHO05D008639 3.9e-21 105.5 180 48.9
FAN11G3606 Fragaria x ananassa HOM05D007264 ORTHO05D008639 3.9e-21 105.5 180 48.9
FAN21G2492 Fragaria x ananassa HOM05D007264 ORTHO05D008639 3.9e-21 105.5 177 46.9
Sopen05g005050 Solanum pennellii HOM05D007264 ORTHO05D008639 3.9e-21 105.5 170 47.1
COL.COLO4_18565 Corchorus olitorius HOM05D007264 ORTHO05D008639 6.7e-21 104.8 171 46.8
AL41U10070 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 8.8e-21 104.4 109 55.0
AL4G23740 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 8.8e-21 104.4 109 55.0
Manes.01G170100 Manihot esculenta HOM05D007264 ORTHO05D008639 1.5e-20 103.6 108 57.4
Nn2g13417 Nelumbo nucifera HOM05D007264 ORTHO05D008639 1.5e-20 103.6 92 65.2
TWI79G0692 Tripterygium wilfordii HOM05D007264 ORTHO05D008639 2.0e-20 103.2 167 46.7
Dinv17036 Davidia involucrata HOM05D007264 ORTHO05D008639 2.6e-20 102.8 173 52.6
Dinv42982 Davidia involucrata HOM05D007264 ORTHO05D008639 2.6e-20 102.8 173 52.6
Dinv43117 Davidia involucrata HOM05D007264 ORTHO05D008639 2.6e-20 102.8 173 52.6
Nitab4.5_0014843g0020 Nicotiana tabacum HOM05D007264 ORTHO05D008639 2.6e-20 102.8 120 56.7
Hund18892 Selenicereus undatus HOM05D007264 ORTHO05D008639 2.6e-20 102.8 158 50.6
Thecc.09G317100 Theobroma cacao HOM05D007264 ORTHO05D008639 2.6e-20 102.8 106 61.3
Gohir.A07G099900 Gossypium hirsutum HOM05D007264 ORTHO05D008639 3.3e-20 102.4 157 53.5
Medtr2g097680 Medicago truncatula HOM05D007264 ORTHO05D008639 3.3e-20 102.4 170 45.9
EL10Ac7g16055 Beta vulgaris HOM05D007264 ORTHO05D008639 4.4e-20 102.1 191 46.1
Carub.0004s1020 Capsella rubella HOM05D007264 ORTHO05D008639 4.4e-20 102.1 109 55.0
HanXRQChr01g0010441 Helianthus annuus HOM05D007264 ORTHO05D008639 4.4e-20 102.1 136 51.5
Medtr1g071380 Medicago truncatula HOM05D007264 ORTHO05D008639 7.4e-20 101.3 176 46.0
MD03G1086900 Malus domestica HOM05D007264 ORTHO05D008639 1.7e-19 100.1 147 49.7
AT2G29180 Arabidopsis thaliana HOM05D007264 ORTHO05D008639 2.2e-19 99.8 121 53.7
BolC2t12437H Brassica oleracea HOM05D007264 ORTHO05D008639 2.2e-19 99.8 163 46.6
BcaB01g03133 Brassica carinata HOM05D007264 ORTHO05D008639 8.2e-19 97.8 111 58.6
BcaC03g18293 Brassica carinata HOM05D007264 ORTHO05D008639 8.2e-19 97.8 163 46.0
C02p63690 Brassica napus HOM05D007264 ORTHO05D008639 8.2e-19 97.8 163 46.0
Cpa.g.sc81.107 Carica papaya HOM05D007264 ORTHO05D008639 1.1e-18 97.4 177 46.9
vmacro03038 Vaccinium macrocarpon HOM05D007264 ORTHO05D008639 1.1e-18 97.4 166 45.2
ATR0559G356 Amborella trichopoda HOM05D007264 ORTHO05D008639 1.4e-18 97.1 95 64.2
AUR62020022 Chenopodium quinoa HOM05D007264 ORTHO05D008639 2.4e-18 96.3 104 57.7
CDE04G3075 Ceratophyllum demersum HOM05D007264 ORTHO05D008639 3.1e-18 95.9 107 53.3
MSTRG.11098 Avicennia marina HOM05D007264 ORTHO05D008639 5.3e-18 95.1 163 48.5
CiPaw.14G066400 Carya illinoinensis HOM05D007264 ORTHO05D008639 1.2e-17 94.0 175 48.6
Lj3g0004900 Lotus japonicus HOM05D007264 ORTHO05D008639 1.2e-17 94.0 142 45.8
Sabra16G0147800 Salix brachista HOM05D007264 ORTHO05D008639 1.2e-17 94.0 121 54.5
ECA248G2900 Erigeron canadensis HOM05D007264 ORTHO05D008639 1.6e-17 93.6 176 44.9
Lalb_Chr24g0394031 Lupinus albus HOM05D007264 ORTHO05D008639 2.0e-17 93.2 175 47.4
PSO339G5862 Papaver somniferum HOM05D007264 ORTHO05D008639 3.5e-17 92.4 177 42.9
CARHR122460 Cardamine hirsuta HOM05D007264 ORTHO05D008639 4.5e-17 92.0 172 44.8
Oeu002437.1 Olea europaea HOM05D007264 ORTHO05D008639 4.5e-17 92.0 91 63.7
Oeu002436.1 Olea europaea HOM05D007264 ORTHO05D008639 5.9e-17 91.7 91 64.8
Sc25g0001650 Simmondsia chinensis HOM05D007264 ORTHO05D008639 7.7e-17 91.3 108 50.0
GSVIVG01024917001 Vitis vinifera HOM05D007264 ORTHO05D008639 1.3e-16 90.5 177 46.3
A02p43580 Brassica napus HOM05D007264 ORTHO05D008639 1.7e-16 90.1 161 43.5
BraA02t09285Z Brassica rapa HOM05D007264 ORTHO05D008639 1.7e-16 90.1 162 43.2
Phvul.L007743 Phaseolus vulgaris HOM05D007264 ORTHO05D008639 1.7e-16 90.1 159 44.0
VMungo1080G0594 Vigna mungo HOM05D007264 ORTHO05D008639 2.9e-16 89.4 162 43.2
Aa31LG5G7130 Aethionema arabicum HOM05D007264 ORTHO05D008639 6.5e-16 88.2 72 70.8
Potri.001G243500 Populus trichocarpa HOM05D007264 ORTHO05D008639 6.5e-16 88.2 180 42.8
Glyma.13G338500 Glycine max HOM05D007264 ORTHO05D008639 8.5e-16 87.8 172 42.4
PSO513G0105 Papaver somniferum HOM05D007264 ORTHO05D008639 4.2e-15 85.5 165 42.4
SGA_v2.0_scaffold111G31536 Striga asiatica HOM05D007264 ORTHO05D008639 5.5e-15 85.1 198 42.4
DCAR_005951 Daucus carota HOM05D007264 ORTHO05D008639 7.2e-15 84.7 127 48.0
Glyma.15G035800 Glycine max HOM05D007264 ORTHO05D008639 1.2e-14 84.0 152 44.1
Duzib168G0085 Durio zibethinus HOM05D007264 ORTHO05D008639 3.6e-14 82.4 103 52.4
Atru.chr3.3962 Acer truncatum HOM05D007264 ORTHO05D008639 4.7e-14 82.0 109 49.5
Sp4g11990 Schrenkiella parvula HOM05D007264 ORTHO05D008639 6.1e-14 81.6 172 41.3
Actinidia33776 Actinidia chinensis HOM05D007264 ORTHO05D008639 8.0e-14 81.3 173 46.8
THA.LOC104800684 Tarenaya hassleriana HOM05D007264 ORTHO05D008639 1.8e-13 80.1 190 40.5
Aqoxy1G00887 Aquilegia oxysepala HOM05D007264 ORTHO05D008639 2.3e-13 79.7 169 41.4
unitig_899.g15261 Utricularia gibba HOM05D007264 ORTHO05D008639 2.3e-13 79.7 166 41.6
Ah.15g098550 Amaranthus hybridus HOM05D007264 ORTHO05D008639 4.0e-13 79.0 103 54.4
AUR62001749 Chenopodium quinoa HOM05D007264 ORTHO05D008639 8.8e-13 77.8 173 41.6
TPR.G6833 Trifolium pratense HOM05D007264 ORTHO05D008639 7.5e-12 74.7 139 43.9
Psat5g287960 Pisum sativum HOM05D007264 ORTHO05D008639 6.3e-11 71.6 170 38.8
TAR369G0859 Trochodendron aralioides HOM05D007264 ORTHO05D008639 2.0e-09 66.6 105 46.7
CANSAT54G1805 Cannabis sativa HOM05D007264 ORTHO05D008639 3.8e-08 62.4 169 40.2
BcaB01g03134 Brassica carinata HOM05D007264 ORTHO05D008639 4.2e-07 58.9 171 35.7
Mapoly0102s0035 Marchantia polymorpha HOM05D007264 ORTHO05D008639 4.7e-06 55.5 101 38.6
Zm00001eb299600 Zea mays HOM05D016300 ORTHO05D008639 6.1e-06 55.1 66 51.5
Zm00001eb299620 Zea mays HOM05D016300 ORTHO05D008639 6.1e-06 55.1 66 51.5
Zm00001eb440750 Zea mays HOM05D016300 ORTHO05D008639 6.1e-06 55.1 66 51.5


User provided reference genes

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