Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0006708 Sechium edule HOM05D000901 ORTHO05D004766 6.8e-136 487.3 237 100.0
ClCG08G014120 Citrullus lanatus HOM05D000901 ORTHO05D004766 2.3e-107 392.5 237 82.7
CsaV3_2G024310 Cucumis sativus L. HOM05D000901 ORTHO05D004766 1.9e-106 389.4 237 79.3
MELO3C011351.2 Cucumis melo HOM05D000901 ORTHO05D004766 3.7e-105 385.2 239 79.5
Cfa013996 Carpinus fangiana HOM05D000901 ORTHO05D004766 1.5e-77 293.5 227 63.0
Sabra05G0189000 Salix brachista HOM05D000901 ORTHO05D004766 7.2e-77 291.2 207 66.7
COL.COLO4_26098 Corchorus olitorius HOM05D000901 ORTHO05D004766 2.7e-76 289.3 225 61.3
Manes.05G143600 Manihot esculenta HOM05D000901 ORTHO05D004766 2.7e-76 289.3 212 63.7
Thecc.08G049900 Theobroma cacao HOM05D000901 ORTHO05D004766 2.3e-75 286.2 230 59.6
Duzib041G0373 Durio zibethinus HOM05D000901 ORTHO05D004766 3.0e-75 285.8 217 61.8
Potri.005G244400 Populus trichocarpa HOM05D000901 ORTHO05D004766 5.2e-75 285.0 203 64.0
Cpa.g.sc26.277 Carica papaya HOM05D000901 ORTHO05D004766 9.7e-74 280.8 237 56.1
Ciclev10002332m.g Citrus clementina HOM05D000901 ORTHO05D004766 8.2e-73 277.7 229 59.8
RcHm_v2.0_Chr6g0303571 Rosa chinensis HOM05D000901 ORTHO05D004766 1.4e-72 276.9 214 60.3
FvH4_2g38030 Fragaria vesca HOM05D000901 ORTHO05D004766 2.4e-72 276.2 212 60.4
QL02p012636 Quercus lobata HOM05D000901 ORTHO05D004766 3.1e-72 275.8 244 57.8
CiPaw.07G144500 Carya illinoinensis HOM05D000901 ORTHO05D004766 4.1e-72 275.4 219 62.1
Gorai.010G001700 Gossypium raimondii HOM05D000901 ORTHO05D004766 4.1e-72 275.4 214 60.3
Glyma.04G021400 Glycine max HOM05D000901 ORTHO05D004766 7.0e-72 274.6 229 59.4
PSO063G0231 Papaver somniferum HOM05D000901 ORTHO05D004766 1.6e-71 273.5 214 60.7
Phvul.009G019200 Phaseolus vulgaris HOM05D000901 ORTHO05D004766 2.0e-71 273.1 218 61.0
TPR.G9568 Trifolium pratense HOM05D000901 ORTHO05D004766 4.5e-71 271.9 204 63.2
Lalb_Chr11g0061781 Lupinus albus HOM05D000901 ORTHO05D004766 5.9e-71 271.6 205 62.0
MD08G1008700 Malus domestica HOM05D000901 ORTHO05D004766 7.7e-71 271.2 200 60.0
VMungo1309G2869 Vigna mungo HOM05D002716 ORTHO05D003324 2.2e-70 269.6 212 62.3
Ca_11598_v3 Cicer arietinum L. HOM05D000901 ORTHO05D004766 3.8e-70 268.9 202 61.4
Thecc.08G050000 Theobroma cacao HOM05D000901 ORTHO05D004766 6.5e-70 268.1 224 57.6
Eucgr.F03719 Eucalyptus grandis HOM05D000901 ORTHO05D004766 8.5e-70 267.7 214 59.8
FAN20G3106 Fragaria x ananassa HOM05D000901 ORTHO05D004766 8.5e-70 267.7 203 59.6
TWI56G0802 Tripterygium wilfordii HOM05D000901 ORTHO05D004766 1.1e-69 267.3 207 62.3
arahy.Tifrunner.gnm1.ann1.K685T3 Arachis hypogaea HOM05D000901 ORTHO05D004766 1.5e-69 266.9 204 62.7
Eucgr.F01691 Eucalyptus grandis HOM05D000901 ORTHO05D004766 1.9e-69 266.5 204 62.7
arahy.Tifrunner.gnm1.ann1.774XMB Arachis hypogaea HOM05D000901 ORTHO05D004766 2.5e-69 266.2 204 62.7
Prupe.1G360400 Prunus persica HOM05D000901 ORTHO05D004766 3.2e-69 265.8 223 57.0
Sp5g31130 Schrenkiella parvula HOM05D000901 ORTHO05D004766 3.2e-69 265.8 211 60.7
MD15G1007500 Malus domestica HOM05D000901 ORTHO05D004766 4.2e-69 265.4 210 57.1
CSS0049889 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 5.5e-69 265.0 215 59.1
Thhalv10019591m.g Eutrema salsugineum HOM05D000901 ORTHO05D004766 5.5e-69 265.0 200 63.0
vmacro21856 Vaccinium macrocarpon HOM05D000901 ORTHO05D004766 5.5e-69 265.0 210 58.1
CSS0047191 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 1.2e-68 263.8 210 60.0
CANSAT25G0446 Cannabis sativa HOM05D000901 ORTHO05D004766 2.7e-68 262.7 209 61.2
PSO782G4846 Papaver somniferum HOM05D000901 ORTHO05D004766 2.7e-68 262.7 198 61.1
Potri.002G017500 Populus trichocarpa HOM05D000901 ORTHO05D004766 3.6e-68 262.3 208 60.6
BcaC03g15640 Brassica carinata HOM05D000901 ORTHO05D004766 8.0e-68 261.2 211 59.2
BolC2t09354H Brassica oleracea HOM05D000901 ORTHO05D004766 8.0e-68 261.2 211 59.2
BraA02t07071Z Brassica rapa HOM05D000901 ORTHO05D004766 1.0e-67 260.8 215 58.6
Medtr0332s0020 Medicago truncatula HOM05D000901 ORTHO05D004766 1.0e-67 260.8 195 62.6
PGR031G2145 Punica granatum HOM05D000901 ORTHO05D004766 1.0e-67 260.8 209 60.8
Glyma.04G021300 Glycine max HOM05D000901 ORTHO05D004766 1.4e-67 260.4 206 61.2
Lj4A800T39 Lonicera japonica HOM05D000901 ORTHO05D004766 2.3e-67 259.6 225 57.3
C02p33510 Brassica napus HOM05D000901 ORTHO05D004766 3.0e-67 259.2 211 58.8
Carub.0002s2290 Capsella rubella HOM05D000901 ORTHO05D004766 3.0e-67 259.2 211 59.7
HanXRQChr06g0184521 Helianthus annuus HOM05D000901 ORTHO05D004766 6.8e-67 258.1 219 54.8
AT1G76020 Arabidopsis thaliana HOM05D000901 ORTHO05D004766 8.8e-67 257.7 206 60.2
A02p20390 Brassica napus HOM05D000901 ORTHO05D004766 1.2e-66 257.3 211 59.2
Aqoxy5G01833 Aquilegia oxysepala HOM05D000901 ORTHO05D004766 1.5e-66 256.9 212 58.0
Sc15g0004710 Simmondsia chinensis HOM05D000901 ORTHO05D004766 2.0e-66 256.5 200 60.5
CARHR069550 Cardamine hirsuta HOM05D000901 ORTHO05D004766 3.4e-66 255.8 205 60.5
vmacro04376 Vaccinium macrocarpon HOM05D000901 ORTHO05D004766 5.7e-66 255.0 213 57.3
Actinidia37946 Actinidia chinensis HOM05D000901 ORTHO05D004766 7.5e-66 254.6 217 54.8
Lj1g0003310 Lotus japonicus HOM05D000901 ORTHO05D004766 9.7e-66 254.2 200 60.5
TAR381G0201 Trochodendron aralioides HOM05D000901 ORTHO05D004766 1.3e-65 253.8 232 54.3
SGA_v2.0_scaffold145G36086 Striga asiatica HOM05D000901 ORTHO05D004766 2.8e-65 252.7 216 58.3
Nitab4.5_0000498g0060 Nicotiana tabacum HOM05D000901 ORTHO05D004766 4.8e-65 251.9 196 58.7
AUR62036698 Chenopodium quinoa HOM05D000901 ORTHO05D004766 6.3e-65 251.5 195 59.5
Oeu048721.1 Olea europaea HOM05D000901 ORTHO05D004766 6.3e-65 251.5 211 56.4
Nn6g31933 Nelumbo nucifera HOM05D000901 ORTHO05D004766 8.3e-65 251.1 223 56.5
Aa31LG4G6150 Aethionema arabicum HOM05D000901 ORTHO05D004766 1.1e-64 250.8 206 59.7
CSS0010771 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 1.4e-64 250.4 220 55.0
Psat7g082200 Pisum sativum HOM05D000901 ORTHO05D004766 1.4e-64 250.4 204 58.3
Gohir.A06G001500 Gossypium hirsutum HOM05D000901 ORTHO05D004766 4.1e-64 248.8 184 63.6
Hund05158 Selenicereus undatus HOM05D000901 ORTHO05D004766 4.1e-64 248.8 220 55.9
Hund05161 Selenicereus undatus HOM05D000901 ORTHO05D004766 4.1e-64 248.8 220 55.9
C06p49920 Brassica napus HOM05D000901 ORTHO05D004766 5.3e-64 248.4 213 57.7
Migut.C00891 Erythranthe guttata HOM05D000901 ORTHO05D004766 1.6e-63 246.9 202 55.9
Hund01706 Selenicereus undatus HOM05D000901 ORTHO05D004766 1.6e-63 246.9 224 53.1
A07p41510 Brassica napus HOM05D000901 ORTHO05D004766 2.0e-63 246.5 213 56.8
EL10Ac1g02116 Beta vulgaris HOM05D000901 ORTHO05D004766 4.5e-63 245.4 195 57.4
Sopen12g031250 Solanum pennellii HOM05D000901 ORTHO05D004766 4.5e-63 245.4 222 55.0
THA.LOC104813773 Tarenaya hassleriana HOM05D000901 ORTHO05D004766 4.5e-63 245.4 197 60.4
HanXRQChr14g0429411 Helianthus annuus HOM05D000901 ORTHO05D004766 5.9e-63 245.0 219 53.9
BcaC08g47306 Brassica carinata HOM05D000901 ORTHO05D004766 7.7e-63 244.6 213 57.3
BcaC08g47307 Brassica carinata HOM05D000901 ORTHO05D004766 7.7e-63 244.6 213 57.3
Nitab4.5_0002730g0020 Nicotiana tabacum HOM05D000901 ORTHO05D004766 7.7e-63 244.6 205 55.1
BcaC08g47093 Brassica carinata HOM05D000901 ORTHO05D004766 1.3e-62 243.8 211 58.3
AL2G36040 Arabidopsis lyrata HOM05D000901 ORTHO05D004766 1.7e-62 243.4 228 53.5
Lsat_1_v5_gn_2_7381 Lactuca sativa HOM05D000901 ORTHO05D004766 1.7e-62 243.4 222 54.1
PGR083G1908 Punica granatum HOM05D000901 ORTHO05D004766 1.7e-62 243.4 205 59.5
ECA238G3494 Erigeron canadensis HOM05D000901 ORTHO05D004766 2.2e-62 243.0 200 57.5
Nitab4.5_0001936g0050 Nicotiana tabacum HOM05D000901 ORTHO05D004766 2.9e-62 242.7 205 54.6
BraA06t24738Z Brassica rapa HOM05D000901 ORTHO05D004766 5.0e-62 241.9 210 54.8
AL1G33070 Arabidopsis lyrata HOM05D000901 ORTHO05D004766 6.5e-62 241.5 198 56.6
AUR62013896 Chenopodium quinoa HOM05D000901 ORTHO05D004766 6.5e-62 241.5 215 55.3
GSVIVG01008758001 Vitis vinifera HOM05D000901 ORTHO05D004766 6.5e-62 241.5 187 61.0
BolC5t30582H Brassica oleracea HOM05D000901 ORTHO05D004766 8.5e-62 241.1 209 55.0
Hund05157 Selenicereus undatus HOM05D000901 ORTHO05D004766 8.5e-62 241.1 225 54.2
Hund05162 Selenicereus undatus HOM05D000901 ORTHO05D004766 8.5e-62 241.1 225 54.2
C05p18770 Brassica napus HOM05D000901 ORTHO05D004766 1.1e-61 240.7 209 54.5
MSTRG.1155 Avicennia marina HOM05D000901 ORTHO05D004766 1.5e-61 240.4 192 55.7
DCAR_013891 Daucus carota HOM05D000901 ORTHO05D004766 1.5e-61 240.4 217 53.5
Peaxi162Scf00064g00828 Petunia axillaris HOM05D000901 ORTHO05D004766 1.5e-61 240.4 202 55.0
MBI05_g36763_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 2.5e-61 239.6 200 56.0
BcaC05g25925 Brassica carinata HOM05D000901 ORTHO05D004766 3.2e-61 239.2 212 54.2
Sp1g17990 Schrenkiella parvula HOM05D000901 ORTHO05D004766 4.2e-61 238.8 212 56.1
Ah.00g000720 Amaranthus hybridus HOM05D000901 ORTHO05D004766 5.5e-61 238.4 208 57.2
BcaB07g32030 Brassica carinata HOM05D000901 ORTHO05D004766 5.5e-61 238.4 209 53.6
SalBow7G4280 Salvia bowleyana HOM05D000901 ORTHO05D004766 7.2e-61 238.0 198 57.1
PGSC0003DMG400029329 Solanum tuberosum HOM05D000901 ORTHO05D004766 2.1e-60 236.5 223 50.7
MSTRG.1154 Avicennia marina HOM05D000901 ORTHO05D004766 2.7e-60 236.1 192 55.2
BolC6t40030H Brassica oleracea HOM05D000901 ORTHO05D004766 2.7e-60 236.1 231 53.2
A06p16340 Brassica napus HOM05D000901 ORTHO05D004766 3.6e-60 235.7 210 53.3
Lj4A18T108 Lonicera japonica HOM05D000901 ORTHO05D004766 3.6e-60 235.7 206 54.4
BraA07t31683Z Brassica rapa HOM05D000901 ORTHO05D004766 6.1e-60 235.0 232 52.2
AT1G20225 Arabidopsis thaliana HOM05D000901 ORTHO05D004766 8.0e-60 234.6 215 53.0
CAN.G1517.1 Capsicum annuum HOM05D000901 ORTHO05D004766 8.0e-60 234.6 187 57.8
Carub.0001s1975 Capsella rubella HOM05D000901 ORTHO05D004766 1.0e-59 234.2 212 52.8
Peaxi162Scf00289g00084 Petunia axillaris HOM05D000901 ORTHO05D004766 6.8e-59 231.5 212 51.9
CARHR020720 Cardamine hirsuta HOM05D000901 ORTHO05D004766 1.2e-58 230.7 209 52.6
Cc10_g01220 Coffea canephora HOM05D000901 ORTHO05D004766 1.2e-58 230.7 211 52.1
Sopen12g031260 Solanum pennellii HOM05D000901 ORTHO05D004766 1.2e-58 230.7 201 54.2
unitig_32.g11240 Utricularia gibba HOM05D000901 ORTHO05D004766 2.6e-58 229.6 206 54.4
DCAR_013892 Daucus carota HOM05D000901 ORTHO05D004766 3.4e-58 229.2 221 50.2
Solyc12g094380.2 Solanum lycopersicum HOM05D000901 ORTHO05D004766 5.7e-58 228.4 201 53.7
DCAR_025124 Daucus carota HOM05D000901 ORTHO05D004766 4.8e-57 225.3 229 50.7
HPP92_025437 Vanilla planifolia HOM05D000901 ORTHO05D004766 6.6e-54 214.9 207 49.3
Nn5g30828 Nelumbo nucifera HOM05D000901 ORTHO05D004766 1.5e-53 213.8 189 51.9
HPP92_022203 Vanilla planifolia HOM05D000901 ORTHO05D004766 7.2e-53 211.5 193 50.3
Aa31LG7G4620 Aethionema arabicum HOM05D000901 ORTHO05D004766 9.5e-53 211.1 224 48.7
FAN27G1122 Fragaria x ananassa HOM05D000901 ORTHO05D001160 6.1e-52 208.4 158 62.0
Os04g0227500 Oryza sativa ssp. japonica HOM05D000901 ORTHO05D004766 6.1e-52 208.4 198 49.5
ATR0661G262 Amborella trichopoda HOM05D000901 ORTHO05D004766 5.2e-51 205.3 223 46.6
CDE09G0289 Ceratophyllum demersum HOM05D000901 ORTHO05D004766 8.9e-51 204.5 188 52.7
Os09g0542200 Oryza sativa ssp. japonica HOM05D000901 ORTHO05D004766 7.5e-50 201.4 200 50.0
SGA_v2.0_scaffold292G47381 Striga asiatica HOM05D000901 ORTHO05D004766 1.3e-49 200.7 192 52.6
Zm00001eb103900 Zea mays HOM05D000901 ORTHO05D004766 2.8e-49 199.5 203 47.8
Rhsim06G0013400 Rhododendron simsii HOM05D000901 ORTHO05D004766 9.2e-48 194.5 180 54.4
HPP92_026881 Vanilla planifolia HOM05D000901 ORTHO05D004766 2.0e-47 193.4 210 46.2
SEGI_34166 Sequoiadendron giganteum HOM05D000901 ORTHO05D004766 3.5e-47 192.6 216 44.9
HPP92_003483 Vanilla planifolia HOM05D000901 ORTHO05D004766 1.7e-46 190.3 210 45.2
Thhalv10010046m.g Eutrema salsugineum HOM05D000901 ORTHO05D004766 1.0e-43 181.0 166 54.2
Rhsim07G0249300 Rhododendron simsii HOM05D000901 ORTHO05D004766 8.9e-43 177.9 220 45.9
Psat7g082240 Pisum sativum HOM05D000901 ORTHO05D004766 1.2e-42 177.6 135 61.5
Nitab4.5_0010135g0010 Nicotiana tabacum HOM05D000901 ORTHO05D004766 1.5e-42 177.2 200 45.0
Actinidia29763 Actinidia chinensis HOM05D000901 ORTHO05D004766 1.9e-40 170.2 217 46.1
Dinv31885 Davidia involucrata HOM05D000901 ORTHO05D001160 1.3e-38 164.1 127 59.1
SMO137G0357 Selaginella moellendorffii HOM05D000901 ORTHO05D004766 6.6e-38 161.8 190 40.0
MBI05_g08641_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 1.1e-35 154.5 140 51.4
FAN15G2950 Fragaria x ananassa HOM05D000901 ORTHO05D001160 2.6e-34 149.8 158 48.7
Eucgr.L01283 Eucalyptus grandis HOM05D000901 ORTHO05D004766 2.4e-32 143.3 111 63.1
Pp3c23_11410 Physcomitrium patens HOM05D000901 ORTHO05D004766 3.2e-32 142.9 198 36.4
BolC1t01801H Brassica oleracea HOM05D000901 ORTHO05D004766 5.4e-32 142.1 110 62.7
Oeu048720.1 Olea europaea HOM05D000901 ORTHO05D004766 2.7e-31 139.8 105 62.9
Lj2g0002110 Lotus japonicus HOM05D000901 ORTHO05D004766 3.0e-30 136.3 145 51.0
MSTRG.25272 Avicennia marina HOM05D000901 ORTHO05D004766 6.6e-30 135.2 121 57.9
Mapoly0103s0033 Marchantia polymorpha HOM05D000901 ORTHO05D004766 2.5e-29 133.3 189 39.7
MBI05_g19938_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 3.3e-29 132.9 115 58.3
Haze_22688 Corylus avellana HOM05D000901 ORTHO05D004766 7.3e-29 131.7 96 63.5
Zm00001eb419520 Zea mays HOM05D000901 ORTHO05D004766 7.3e-29 131.7 112 53.6
BcaB05g24967 Brassica carinata HOM05D000901 ORTHO05D001160 2.1e-28 130.2 108 54.6
AUR62036699 Chenopodium quinoa HOM05D000901 ORTHO05D004766 3.2e-24 116.3 107 51.4
BolC6t40031H Brassica oleracea HOM05D000901 ORTHO05D004766 4.1e-24 115.9 136 44.9
MBI05_g47803_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 4.1e-24 115.9 177 38.4
C03p50790 Brassica napus HOM05D000901 ORTHO05D004766 9.2e-24 114.8 123 44.7
BcaC01g02788 Brassica carinata HOM05D000901 ORTHO05D004766 6.0e-23 112.1 117 47.0
BcaC09g50963 Brassica carinata HOM05D000901 ORTHO05D004766 1.3e-22 110.9 85 62.4
Rhsim07G0249200 Rhododendron simsii HOM05D000901 ORTHO05D004766 3.9e-22 109.4 89 64.0
Haze_22689 Corylus avellana HOM05D000901 ORTHO05D004766 5.1e-22 109.0 129 48.8
CBR_g10910 Chara braunii HOM05D000901 ORTHO05D004766 1.5e-21 107.5 219 32.4
C07p15020 Brassica napus HOM05D000901 ORTHO05D004766 1.2e-20 104.4 114 43.9
CiPaw.07G144400 Carya illinoinensis HOM05D000901 ORTHO05D004766 4.7e-20 102.4 90 51.1
Ciclev10027478m.g Citrus clementina HOM05D000901 ORTHO05D004766 5.2e-19 99.0 74 58.1
AagrBONN_evm.TU.Sc2ySwM_228.1931 Anthoceros agrestis HOM05D000901 ORTHO05D004766 1.5e-18 97.4 148 36.5
BolC6t37476H Brassica oleracea HOM05D000901 ORTHO05D004766 3.4e-18 96.3 88 50.0
C03p60410 Brassica napus HOM05D000901 ORTHO05D004766 5.4e-16 89.0 98 41.8
Eucgr.H01097 Eucalyptus grandis HOM05D000901 ORTHO05D004766 1.6e-15 87.4 74 58.1
BcaC09g50962 Brassica carinata HOM05D000901 ORTHO05D004766 7.3e-13 78.6 62 54.8
BolC3t18302H Brassica oleracea HOM05D000901 ORTHO05D004766 1.3e-12 77.8 90 41.1


User provided reference genes

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