Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0006544 Sechium edule HOM05D004997 ORTHO05D005921 2.3e-61 238.8 131 100.0
Sed0005528 Sechium edule HOM05D004997 ORTHO05D005921 6.6e-56 220.7 131 92.4
Eucgr.E02397 Eucalyptus grandis HOM05D004997 ORTHO05D005921 2.5e-55 218.8 131 90.8
CSS0020008 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 5.6e-55 217.6 131 90.1
MELO3C002717.2 Cucumis melo HOM05D004997 ORTHO05D005921 5.6e-55 217.6 131 90.1
Actinidia07691 Actinidia chinensis HOM05D004997 ORTHO05D005921 2.1e-54 215.7 131 89.3
THA.LOC104814295 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 3.6e-54 214.9 131 87.8
TAR626G0896 Trochodendron aralioides HOM05D004997 ORTHO05D005921 6.2e-54 214.2 131 87.8
Cfa000953 Carpinus fangiana HOM05D004997 ORTHO05D005921 8.1e-54 213.8 131 87.8
THA.LOC104812669 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 1.1e-53 213.4 131 87.8
Dinv32261 Davidia involucrata HOM05D004997 ORTHO05D005921 1.4e-53 213.0 131 87.8
TWI38G0351 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 1.4e-53 213.0 131 87.8
CiPaw.10G092400 Carya illinoinensis HOM05D004997 ORTHO05D005921 2.3e-53 212.2 131 86.3
CANSAT35G1260 Cannabis sativa HOM05D004997 ORTHO05D005921 4.0e-53 211.5 130 87.7
Nn4g24866 Nelumbo nucifera HOM05D004997 ORTHO05D005921 4.0e-53 211.5 131 86.3
CiPaw.09G124400 Carya illinoinensis HOM05D004997 ORTHO05D005921 6.8e-53 210.7 131 85.5
Gohir.A10G040300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 6.8e-53 210.7 130 88.5
Gorai.011G043400 Gossypium raimondii HOM05D004997 ORTHO05D005921 6.8e-53 210.7 130 88.5
Potri.004G131900 Populus trichocarpa HOM05D004997 ORTHO05D005921 6.8e-53 210.7 131 87.0
TWI38G1166 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 1.2e-52 209.9 126 89.7
Carub.0001s2824 Capsella rubella HOM05D004997 ORTHO05D005921 1.5e-52 209.5 131 85.5
Gohir.D10G041200 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.5e-52 209.5 130 88.5
Lalb_Chr05g0222161 Lupinus albus HOM05D004997 ORTHO05D005921 1.5e-52 209.5 125 89.6
Ciclev10017164m.g Citrus clementina HOM05D004997 ORTHO05D005921 2.0e-52 209.1 131 86.3
Lj5g0010316 Lotus japonicus HOM05D004997 ORTHO05D005921 2.0e-52 209.1 129 86.0
Psat2g084800 Pisum sativum HOM05D004997 ORTHO05D005921 2.0e-52 209.1 129 86.8
CARHR029400 Cardamine hirsuta HOM05D004997 ORTHO05D005921 2.6e-52 208.8 131 86.3
Glyma.12G006600 Glycine max HOM05D004997 ORTHO05D005921 2.6e-52 208.8 129 86.8
MD05G1284500 Malus domestica HOM05D004997 ORTHO05D005921 2.6e-52 208.8 131 84.7
Lj4g0009583 Lotus japonicus HOM05D004997 ORTHO05D005921 3.4e-52 208.4 129 86.0
MD10G1262900 Malus domestica HOM05D004997 ORTHO05D005921 4.4e-52 208.0 131 84.0
Glyma.08G046600 Glycine max HOM05D004997 ORTHO05D005921 5.8e-52 207.6 129 86.0
Medtr5g055650 Medicago truncatula HOM05D004997 ORTHO05D005921 5.8e-52 207.6 129 86.0
Prupe.4G079900 Prunus persica HOM05D004997 ORTHO05D005921 5.8e-52 207.6 131 84.0
AL1G43880 Arabidopsis lyrata HOM05D004997 ORTHO05D005921 9.9e-52 206.8 131 84.0
ECA233G0220 Erigeron canadensis HOM05D004997 ORTHO05D005921 9.9e-52 206.8 129 86.0
FAN11G3072 Fragaria x ananassa HOM05D004997 ORTHO05D005921 9.9e-52 206.8 130 85.4
VMungo0251G3606 Vigna mungo HOM05D004997 ORTHO05D005921 9.9e-52 206.8 129 86.0
Migut.M00914 Erythranthe guttata HOM05D004997 ORTHO05D005921 1.7e-51 206.1 126 87.3
Sp1g25870 Schrenkiella parvula HOM05D004997 ORTHO05D005921 1.7e-51 206.1 131 84.0
HanXRQChr11g0340951 Helianthus annuus HOM05D004997 ORTHO05D005921 2.2e-51 205.7 126 87.3
FvH4_3g05660 Fragaria vesca HOM05D004997 ORTHO05D005921 2.9e-51 205.3 130 84.6
Gohir.D05G151300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 2.9e-51 205.3 130 86.2
Gorai.009G155300 Gossypium raimondii HOM05D004997 ORTHO05D005921 2.9e-51 205.3 130 86.2
RcHm_v2.0_Chr5g0013981 Rosa chinensis HOM05D004997 ORTHO05D005921 2.9e-51 205.3 131 84.0
FAN21G2809 Fragaria x ananassa HOM05D004997 ORTHO05D005921 3.7e-51 204.9 131 84.0
Thecc.06G151500 Theobroma cacao HOM05D004997 ORTHO05D005921 3.7e-51 204.9 130 86.2
Phvul.002G321900 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 4.9e-51 204.5 129 83.7
GSVIVG01021444001 Vitis vinifera HOM05D004997 ORTHO05D005921 6.4e-51 204.1 125 86.4
MSTRG.16239 Avicennia marina HOM05D004997 ORTHO05D005921 1.1e-50 203.4 126 85.7
PSO339G4484 Papaver somniferum HOM05D004997 ORTHO05D005921 1.1e-50 203.4 131 82.4
BcaC06g35482 Brassica carinata HOM05D004997 ORTHO05D005921 1.4e-50 203.0 130 83.1
BolC7t42045H Brassica oleracea HOM05D004997 ORTHO05D005921 1.4e-50 203.0 130 83.1
Duzib192G0549 Durio zibethinus HOM05D004997 ORTHO05D005921 1.4e-50 203.0 131 86.3
Gohir.A05G148700 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.4e-50 203.0 130 86.2
Solyc08g016420.3 Solanum lycopersicum HOM05D004997 ORTHO05D005921 1.4e-50 203.0 131 80.9
Sopen08g006800 Solanum pennellii HOM05D004997 ORTHO05D005921 1.4e-50 203.0 131 80.9
AT1G29990 Arabidopsis thaliana HOM05D004997 ORTHO05D005921 1.9e-50 202.6 129 82.9
unitig_32.g11442 Utricularia gibba HOM05D004997 ORTHO05D005921 1.9e-50 202.6 127 85.0
PSO384G3576 Papaver somniferum HOM05D004997 ORTHO05D005921 3.2e-50 201.8 131 81.7
BcaB07g32600 Brassica carinata HOM05D004997 ORTHO05D005921 5.4e-50 201.1 131 81.7
A09p36530 Brassica napus HOM05D004997 ORTHO05D005921 5.4e-50 201.1 131 81.7
BraA09t39174Z Brassica rapa HOM05D004997 ORTHO05D005921 5.4e-50 201.1 131 81.7
SGA_v2.0_scaffold1G00167 Striga asiatica HOM05D004997 ORTHO05D005921 5.4e-50 201.1 126 84.9
MSTRG.7483 Avicennia marina HOM05D004997 ORTHO05D005921 1.2e-49 199.9 126 84.9
HanXRQChr01g0020611 Helianthus annuus HOM05D004997 ORTHO05D005921 1.2e-49 199.9 130 83.8
arahy.Tifrunner.gnm1.ann1.06CE9J Arachis hypogaea HOM05D004997 ORTHO05D005921 2.1e-49 199.1 138 80.4
C05p28750 Brassica napus HOM05D004997 ORTHO05D005921 2.1e-49 199.1 131 80.9
BolC5t31593H Brassica oleracea HOM05D004997 ORTHO05D005921 2.1e-49 199.1 131 80.9
Aqoxy3G00593 Aquilegia oxysepala HOM05D004997 ORTHO05D005921 4.6e-49 198.0 130 80.8
Thhalv10009093m.g Eutrema salsugineum HOM05D004997 ORTHO05D005921 7.8e-49 197.2 131 81.7
Gorai.002G185400 Gossypium raimondii HOM05D004997 ORTHO05D005921 1.7e-48 196.1 130 83.8
ClCG03G007080 Citrullus lanatus HOM05D004997 ORTHO05D005921 5.1e-48 194.5 186 64.5
BcaB03g13847 Brassica carinata HOM05D004997 ORTHO05D005921 1.1e-47 193.4 130 80.8
SGA_v2.0_scaffold333G48998 Striga asiatica HOM05D004997 ORTHO05D005921 1.5e-47 193.0 139 77.7
Manes.11G058500 Manihot esculenta HOM05D004997 ORTHO05D005921 4.3e-47 191.4 113 87.6
HPP92_006252 Vanilla planifolia HOM05D004997 ORTHO05D005921 4.3e-47 191.4 131 75.6
PGR042G1500 Punica granatum HOM05D004997 ORTHO05D005921 9.6e-47 190.3 131 78.6
CsaV3_1G032650 Cucumis sativus L. HOM05D004997 ORTHO05D005921 2.1e-46 189.1 113 88.5
FAN25G0101 Fragaria x ananassa HOM05D004997 ORTHO05D005921 3.6e-46 188.3 144 73.6
A07p10100 Brassica napus HOM05D004997 ORTHO05D005921 6.2e-46 187.6 134 79.1
TPR.G13287 Trifolium pratense HOM05D004997 ORTHO05D005921 6.2e-46 187.6 126 78.6
CDE09G0791 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 4.0e-45 184.9 129 75.2
Atru.chr10.1243 Acer truncatum HOM05D004997 ORTHO05D005921 5.2e-45 184.5 113 85.8
Ah.09g232610 Amaranthus hybridus HOM05D000413 ORTHO05D000292 1.5e-44 183.0 111 83.8
CDE02G0055 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 1.5e-44 183.0 129 74.4
Duzib235G0692 Durio zibethinus HOM05D004997 ORTHO05D005921 2.9e-43 178.7 111 85.6
Gohir.D01G100600 Gossypium hirsutum HOM05D004997 ORTHO05D005921 4.9e-43 177.9 121 81.8
Lsat_1_v5_gn_1_91801 Lactuca sativa HOM05D004997 ORTHO05D005921 4.9e-43 177.9 113 86.7
Os02g0246300 Oryza sativa ssp. japonica HOM05D004997 ORTHO05D005921 4.9e-43 177.9 124 73.4
arahy.Tifrunner.gnm1.ann1.FF119L Arachis hypogaea HOM05D004997 ORTHO05D005921 6.4e-43 177.6 127 77.2
SEGI_33388 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 8.4e-43 177.2 129 72.9
CSS0046404 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 1.1e-42 176.8 105 91.4
BcaC05g27010 Brassica carinata HOM05D004997 ORTHO05D005921 2.4e-42 175.6 113 80.5
Gorai.002G125400 Gossypium raimondii HOM05D004997 ORTHO05D005921 4.2e-42 174.9 121 80.2
Rhsim13G0211800 Rhododendron simsii HOM05D004997 ORTHO05D005921 4.2e-42 174.9 104 91.3
CAN.G134.135 Capsicum annuum HOM05D004997 ORTHO05D000105 7.1e-42 174.1 111 80.2
MBI07_g26358_MAGBIO Magnolia biondii HOM05D004997 ORTHO05D005921 1.2e-41 173.3 108 84.3
Hund21531 Selenicereus undatus HOM05D004997 ORTHO05D005921 2.7e-41 172.2 107 83.2
BraA07t28803Z Brassica rapa HOM05D004997 ORTHO05D005921 3.5e-41 171.8 112 81.2
DCAR_027919 Daucus carota HOM05D000413 ORTHO05D000292 4.6e-41 171.4 122 77.0
Prupe.3G104900 Prunus persica HOM05D004997 ORTHO05D005921 4.6e-41 171.4 105 86.7
CAN.G134.136 Capsicum annuum HOM05D004997 ORTHO05D005921 1.7e-40 169.5 111 78.4
QL05p058391 Quercus lobata HOM05D004997 ORTHO05D005921 6.6e-40 167.5 129 72.1
ATR0743G157 Amborella trichopoda HOM05D004997 ORTHO05D005921 1.5e-39 166.4 109 79.8
FAN16G0953 Fragaria x ananassa HOM05D004997 ORTHO05D005921 2.8e-38 162.2 105 81.0
C07p15580 Brassica napus HOM05D004997 ORTHO05D005921 4.8e-38 161.4 112 77.7
Pp3c22_1770 Physcomitrium patens HOM05D004997 ORTHO05D005921 4.8e-38 161.4 125 64.8
Cc02_g37190 Coffea canephora HOM05D004997 ORTHO05D005921 6.2e-38 161.0 131 70.2
Aa31LG6G5670 Aethionema arabicum HOM05D004997 ORTHO05D005921 1.8e-37 159.5 133 69.2
AagrBONN_evm.TU.Sc2ySwM_344.2433 Anthoceros agrestis HOM05D004997 ORTHO05D005921 2.4e-37 159.1 131 62.6
Oeu052376.1 Olea europaea HOM05D004997 ORTHO05D005921 2.4e-37 159.1 97 86.6
Zm00001eb238610 Zea mays HOM05D004997 ORTHO05D005921 9.0e-37 157.1 124 68.5
EL10Ac8g19712 Beta vulgaris HOM05D004997 ORTHO05D005921 1.2e-36 156.8 163 56.4
Mapoly0006s0079 Marchantia polymorpha HOM05D004997 ORTHO05D005921 1.2e-36 156.8 126 65.1
Oeu034156.1 Olea europaea HOM05D004997 ORTHO05D005921 3.4e-36 155.2 92 87.0
vmacro04021 Vaccinium macrocarpon HOM05D004997 ORTHO05D005921 5.8e-36 154.5 87 90.8
arahy.Tifrunner.gnm1.ann1.7IX92P Arachis hypogaea HOM05D004997 ORTHO05D005921 1.7e-35 152.9 91 86.8
COL.COLO4_31081 Corchorus olitorius HOM05D004997 ORTHO05D005921 2.2e-35 152.5 87 90.8
Dinv30737 Davidia involucrata HOM05D004997 ORTHO05D005921 2.9e-35 152.1 92 87.0
PGSC0003DMG400009647 Solanum tuberosum HOM05D004997 ORTHO05D005921 4.9e-35 151.4 92 82.6
Sc17g0004940 Simmondsia chinensis HOM05D004997 ORTHO05D005921 1.1e-34 150.2 97 79.4
SMO367G0874 Selaginella moellendorffii HOM05D004997 ORTHO05D005921 1.6e-33 146.4 110 64.5
Actinidia39569 Actinidia chinensis HOM05D004997 ORTHO05D005921 2.1e-33 146.0 131 67.2
QL06p022817 Quercus lobata HOM05D004997 ORTHO05D005921 2.7e-33 145.6 117 69.2
AUR62039776 Chenopodium quinoa HOM05D004997 ORTHO05D005921 4.6e-33 144.8 84 85.7
Phvul.009G128800 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 2.3e-32 142.5 87 88.5
CAN.G3523.1 Capsicum annuum HOM05D004997 ORTHO05D005921 1.5e-31 139.8 92 77.2
Peaxi162Scf01211g00142 Petunia axillaris HOM05D004997 ORTHO05D005921 1.5e-31 139.8 88 85.2
CAN.G134.137 Capsicum annuum HOM05D004997 ORTHO05D005921 3.3e-31 138.7 95 74.7
SEGI_19850 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 1.4e-29 133.3 90 75.6
Gohir.D01G149300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.2e-28 130.2 95 78.9
SalBow8G3614 Salvia bowleyana HOM05D004997 ORTHO05D005921 3.4e-28 128.6 101 70.3
Lsat_1_v5_gn_5_30841 Lactuca sativa HOM05D004997 ORTHO05D005921 1.2e-25 120.2 71 85.9
Nitab4.5_0010327g0020 Nicotiana tabacum HOM05D004997 ORTHO05D005921 3.5e-25 118.6 92 70.7
Nitab4.5_0000348g0240 Nicotiana tabacum HOM05D004997 ORTHO05D005921 7.9e-25 117.5 92 70.7
CDE02G2003 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 5.1e-24 114.8 88 70.5
Haze_05586 Corylus avellana HOM05D004997 ORTHO05D005921 5.6e-23 111.3 188 43.1
Sabra04G0085700 Salix brachista HOM05D004997 ORTHO05D005921 9.6e-23 110.5 63 90.5
AUR62030207 Chenopodium quinoa HOM05D004997 ORTHO05D005921 1.2e-20 103.6 61 85.2
PRCOL_00000028 Prasinoderma coloniale HOM05D004997 ORTHO05D005921 2.0e-20 102.8 125 44.0
Manes.09G021201 Manihot esculenta HOM05D004997 ORTHO05D005921 1.0e-19 100.5 111 55.9
MCO01G210 Micromonas commoda HOM05D004997 ORTHO05D005921 1.3e-19 100.1 125 43.2
Zm00001eb258640 Zea mays HOM05D004997 ORTHO05D005921 8.4e-19 97.4 67 71.6
Zm00001eb151600 Zea mays HOM05D000394 ORTHO05D016690 1.9e-18 96.3 64 73.4
Zm00001eb310800 Zea mays HOM05D000394 ORTHO05D016690 5.5e-18 94.7 64 71.9
Zm00001eb139040 Zea mays HOM05D000901 ORTHO05D005921 2.7e-17 92.4 85 56.5
Zm00001eb225310 Zea mays HOM05D000901 ORTHO05D005921 2.7e-17 92.4 66 69.7
Zm00001eb269380 Zea mays HOM05D000901 ORTHO05D005921 7.9e-17 90.9 65 70.8
Zm00001eb344510 Zea mays HOM05D000901 ORTHO05D000768 5.1e-16 88.2 68 64.7
Cre12.g502750 Chlamydomonas reinhardtii HOM05D004997 ORTHO05D005921 3.7e-14 82.0 119 43.7
Haze_05599 Corylus avellana HOM05D004997 ORTHO05D005921 3.1e-13 79.0 173 37.0
Cfa022129 Carpinus fangiana HOM05D004997 ORTHO05D005921 1.2e-12 77.0 123 36.6
CBR_g48714 Chara braunii HOM05D004997 ORTHO05D005921 6.7e-08 61.2 123 36.6
arahy.Tifrunner.gnm1.ann1.MPJ1GQ Arachis hypogaea HOM05D004997 ORTHO05D005921 1.5e-07 60.1 39 84.6


User provided reference genes

Program Settings