Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0006532 Sechium edule HOM05D007857 ORTHO05D009355 1.0e-142 510.4 316 100.0
ClCG08G017230 Citrullus lanatus HOM05D007857 ORTHO05D009355 3.0e-78 296.2 252 63.9
MELO3C010736.2 Cucumis melo HOM05D007857 ORTHO05D009355 1.4e-75 287.3 252 62.3
Sed0017756 Sechium edule HOM05D007857 ORTHO05D009355 1.6e-71 273.9 251 61.0
CsaV3_2G025390 Cucumis sativus L. HOM05D007857 ORTHO05D009355 2.3e-70 270.0 227 63.9
Dinv10979 Davidia involucrata HOM05D007857 ORTHO05D009355 5.9e-42 175.6 265 39.2
Dinv14814 Davidia involucrata HOM05D007857 ORTHO05D009355 3.3e-37 159.8 205 41.5
CANSAT01G1499 Cannabis sativa HOM05D007857 ORTHO05D009355 8.2e-36 155.2 261 38.3
Hma1.2p1_1239F.1_g269420 Hydrangea macrophylla HOM05D007857 ORTHO05D009355 2.6e-34 150.2 228 40.4
Thecc.02G276200 Theobroma cacao HOM05D007857 ORTHO05D009355 1.0e-33 148.3 269 37.5
COL.COLO4_20347 Corchorus olitorius HOM05D007857 ORTHO05D009355 1.3e-33 147.9 240 40.4
QL03p054319 Quercus lobata HOM05D007857 ORTHO05D009355 5.5e-32 142.5 247 35.6
CiPaw.06G100500 Carya illinoinensis HOM05D007857 ORTHO05D009355 6.7e-30 135.6 248 34.7
TAR374G0584 Trochodendron aralioides HOM05D007857 ORTHO05D009355 6.7e-30 135.6 245 36.7
CSS0005757 Camellia sinensis var. sinensis HOM05D007857 ORTHO05D009355 1.1e-29 134.8 262 34.7
TWI75G0924 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 4.4e-29 132.9 252 37.3
Phvul.002G175100 Phaseolus vulgaris HOM05D007857 ORTHO05D009355 7.4e-29 132.1 251 37.5
Cfa009341 Carpinus fangiana HOM05D007857 ORTHO05D009355 1.3e-28 131.3 155 47.7
Actinidia20693 Actinidia chinensis HOM05D007857 ORTHO05D009355 1.7e-28 131.0 244 36.5
Ciclev10033758m.g Citrus clementina HOM05D007857 ORTHO05D009355 1.7e-28 131.0 252 38.1
Haze_12382 Corylus avellana HOM05D007857 ORTHO05D009355 1.1e-27 128.3 155 47.1
Glyma.19G186500 Glycine max HOM05D007857 ORTHO05D009355 1.1e-27 128.3 228 38.6
Medtr8g080270 Medicago truncatula HOM05D007857 ORTHO05D009355 1.4e-27 127.9 160 42.5
Potri.010G057800 Populus trichocarpa HOM05D007857 ORTHO05D009355 5.3e-27 125.9 269 34.9
Solyc04g045390.1 Solanum lycopersicum HOM05D007857 ORTHO05D009355 9.1e-27 125.2 173 39.3
Glyma.05G146200 Glycine max HOM05D007857 ORTHO05D009355 1.2e-26 124.8 252 36.1
MD13G1115600 Malus domestica HOM05D007857 ORTHO05D009355 1.2e-26 124.8 253 35.6
MD16G1115600 Malus domestica HOM05D007857 ORTHO05D009355 1.2e-26 124.8 170 44.1
Sabra10G0047600 Salix brachista HOM05D007857 ORTHO05D009355 1.2e-26 124.8 267 35.6
Glyma.03G186400 Glycine max HOM05D007857 ORTHO05D009355 2.0e-26 124.0 225 37.3
RcHm_v2.0_Chr4g0430861 Rosa chinensis HOM05D007857 ORTHO05D009355 2.0e-26 124.0 163 41.7
Sc04g0010010 Simmondsia chinensis HOM05D007857 ORTHO05D009355 3.5e-26 123.2 259 32.4
Rhsim12G0103100 Rhododendron simsii HOM05D007857 ORTHO05D009355 4.5e-26 122.9 261 33.7
TWI36G0032 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 5.9e-26 122.5 242 34.3
TWI36G1497 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 5.9e-26 122.5 242 34.3
Prupe.1G231500 Prunus persica HOM05D007857 ORTHO05D009355 7.7e-26 122.1 235 36.6
Potri.008G177300 Populus trichocarpa HOM05D007857 ORTHO05D009355 1.0e-25 121.7 216 36.6
Manes.13G017400 Manihot esculenta HOM05D007857 ORTHO05D009355 2.2e-25 120.6 214 36.9
TAR622G0135 Trochodendron aralioides HOM05D007857 ORTHO05D009355 2.2e-25 120.6 269 33.1
Ca_18058_v3 Cicer arietinum L. HOM05D007857 ORTHO05D009355 2.9e-25 120.2 249 32.9
Gohir.A03G127600 Gossypium hirsutum HOM05D007857 ORTHO05D009355 2.9e-25 120.2 199 35.7
Gohir.D02G151200 Gossypium hirsutum HOM05D007857 ORTHO05D009355 3.8e-25 119.8 199 35.7
Gorai.005G169600 Gossypium raimondii HOM05D007857 ORTHO05D009355 5.0e-25 119.4 199 35.7
TPR.G17074 Trifolium pratense HOM05D007857 ORTHO05D009355 8.5e-25 118.6 140 47.1
Migut.K00709 Erythranthe guttata HOM05D007857 ORTHO05D009355 1.5e-24 117.9 189 37.0
Lj4g0021592 Lotus japonicus HOM05D007857 ORTHO05D009355 1.9e-24 117.5 252 32.1
Psat7g078480 Pisum sativum HOM05D007857 ORTHO05D009355 1.2e-23 114.8 258 36.0
Lalb_Chr07g0187361 Lupinus albus HOM05D007857 ORTHO05D009355 1.6e-23 114.4 231 34.6
FAN07G0728 Fragaria x ananassa HOM05D007857 ORTHO05D009355 1.4e-22 111.3 209 34.4
PSO782G1056 Papaver somniferum HOM05D007857 ORTHO05D009355 1.4e-22 111.3 259 34.0
Oeu020304.1 Olea europaea HOM05D001334 ORTHO05D001119 1.8e-22 110.9 266 31.2
VMungo0251G2942 Vigna mungo HOM05D007857 ORTHO05D009355 1.8e-22 110.9 238 34.5
FvH4_4g24090 Fragaria vesca HOM05D007857 ORTHO05D009355 2.3e-22 110.5 275 30.9
FAN12G2990 Fragaria x ananassa HOM05D007857 ORTHO05D009355 5.2e-22 109.4 275 30.9
PSO063G0898 Papaver somniferum HOM05D007857 ORTHO05D009355 5.2e-22 109.4 262 33.2
Atru.chr11.2290 Acer truncatum HOM05D007857 ORTHO05D009355 6.8e-22 109.0 256 33.6
SalBow2G3021 Salvia bowleyana HOM05D007857 ORTHO05D009355 9.8e-21 105.1 157 40.1
arahy.Tifrunner.gnm1.ann1.AFM6H1 Arachis hypogaea HOM05D007857 ORTHO05D009355 3.1e-19 100.1 252 34.9
arahy.Tifrunner.gnm1.ann1.32T9N9 Arachis hypogaea HOM05D007857 ORTHO05D009355 4.1e-19 99.8 261 34.5
arahy.Tifrunner.gnm1.ann1.ZB6N55 Arachis hypogaea HOM05D007857 ORTHO05D009355 4.1e-19 99.8 261 34.5
Aqoxy5G03443 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 7.7e-18 95.5 250 30.4
MBI11_g31349_MAGBIO Magnolia biondii HOM05D007857 ORTHO05D009355 7.7e-18 95.5 182 35.7
DCAR_031188 Daucus carota HOM05D007857 ORTHO05D009355 3.8e-17 93.2 228 29.8
Nn4g22377 Nelumbo nucifera HOM05D007857 ORTHO05D009355 3.6e-15 86.7 255 27.5
Nitab4.5_0004967g0040 Nicotiana tabacum HOM05D007857 ORTHO05D009355 1.0e-14 85.1 102 43.1
Eucgr.H04657 Eucalyptus grandis HOM05D007857 ORTHO05D009355 3.0e-14 83.6 240 29.6
PSO357G0688 Papaver somniferum HOM05D007857 ORTHO05D009355 8.8e-14 82.0 244 29.1
SGA_v2.0_scaffold9G04766 Striga asiatica HOM05D007857 ORTHO05D009355 3.4e-13 80.1 225 29.3
PGR119G0189 Punica granatum HOM05D007857 ORTHO05D009355 4.4e-13 79.7 272 29.8
Sopen04g010360 Solanum pennellii HOM05D007857 ORTHO05D009355 2.2e-12 77.4 83 48.2
PGSC0003DMG400017971 Solanum tuberosum HOM05D007857 ORTHO05D009355 2.2e-12 77.4 195 31.8
AL2G26210 Arabidopsis lyrata HOM05D010720 ORTHO05D009355 8.3e-12 75.5 219 30.1
Aqoxy3G01489 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 2.4e-11 73.9 159 30.2
THA.LOC104807888 Tarenaya hassleriana HOM05D010720 ORTHO05D009355 1.2e-10 71.6 218 26.1
Aa31sc48G30 Aethionema arabicum HOM05D010720 ORTHO05D009355 2.0e-10 70.9 209 28.2
SHI17949 Sapria himalayana HOM05D007857 ORTHO05D009355 2.0e-10 70.9 213 28.2
Cpa.g.sc43.26 Carica papaya HOM05D007857 ORTHO05D009355 7.7e-10 68.9 192 28.6
Cc11_g16750 Coffea canephora HOM05D007857 ORTHO05D009355 1.7e-09 67.8 211 28.9
Nitab4.5_0000146g0080 Nicotiana tabacum HOM05D007857 ORTHO05D009355 3.8e-09 66.6 87 42.5
Carub.0002s1388 Capsella rubella HOM05D010720 ORTHO05D009355 2.8e-07 60.5 159 29.6


User provided reference genes

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