Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 8.5e-193 676.8 332 100.0
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 2.4e-155 552.4 337 81.9
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 2.7e-154 548.9 337 80.4
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 1.1e-126 457.2 341 66.6
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 3.1e-126 455.7 341 65.4
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 2.7e-122 442.6 347 64.3
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 1.9e-120 436.4 345 64.1
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 2.5e-120 436.0 341 63.6
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 6.2e-119 431.4 337 63.8
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 6.9e-118 427.9 336 63.4
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 1.5e-117 426.8 339 64.0
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 2.6e-117 426.0 339 64.0
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 1.3e-116 423.7 345 63.2
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 1.7e-116 423.3 341 61.3
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 2.9e-116 422.5 341 61.3
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 4.9e-116 421.8 345 63.8
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 4.9e-116 421.8 340 62.4
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 1.1e-115 420.6 347 62.0
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 1.4e-115 420.2 332 61.4
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 1.4e-115 420.2 347 61.7
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 4.2e-115 418.7 332 61.1
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 5.5e-115 418.3 344 61.9
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 7.1e-115 417.9 344 61.6
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 7.9e-114 414.5 341 62.2
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 1.0e-113 414.1 350 60.9
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 1.3e-113 413.7 368 59.8
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 1.8e-113 413.3 334 63.5
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 3.9e-113 412.1 350 60.9
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 3.9e-113 412.1 331 63.1
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 3.9e-113 412.1 356 59.6
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 6.7e-113 411.4 298 66.4
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 6.7e-113 411.4 310 64.8
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 1.1e-112 410.6 340 61.5
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 1.5e-112 410.2 336 61.6
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 1.9e-112 409.8 339 62.8
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 2.5e-112 409.5 335 62.4
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 2.5e-112 409.5 302 66.2
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 3.3e-112 409.1 360 58.3
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 4.3e-112 408.7 342 62.0
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 4.3e-112 408.7 346 58.4
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 9.7e-112 407.5 329 60.8
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 9.7e-112 407.5 300 65.0
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 6.3e-111 404.8 324 62.0
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 8.2e-111 404.4 301 65.4
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 1.8e-110 403.3 344 59.0
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 1.8e-110 403.3 336 60.7
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 2.4e-110 402.9 343 58.9
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 2.4e-110 402.9 362 57.2
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 4.1e-110 402.1 337 60.5
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 5.3e-110 401.7 318 61.9
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 1.2e-109 400.6 343 63.8
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 1.2e-109 400.6 340 59.7
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 1.5e-109 400.2 322 62.4
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 2.0e-109 399.8 321 62.3
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 2.0e-109 399.8 350 60.0
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 2.6e-109 399.4 345 59.7
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 3.4e-109 399.1 352 57.1
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 4.5e-109 398.7 345 60.0
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 4.5e-109 398.7 318 61.6
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 5.9e-109 398.3 339 59.9
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 7.6e-109 397.9 319 64.6
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 7.6e-109 397.9 334 60.2
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 1.0e-108 397.5 349 59.3
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 1.0e-108 397.5 288 67.0
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 1.3e-108 397.1 297 64.0
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 5.0e-108 395.2 293 65.2
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 6.5e-108 394.8 345 60.0
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 2.5e-107 392.9 345 58.3
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 2.7e-106 389.4 307 62.9
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 1.0e-105 387.5 316 61.4
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 2.3e-105 386.3 341 56.3
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 3.9e-105 385.6 352 57.7
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 5.1e-105 385.2 347 57.3
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 1.5e-104 383.6 344 58.7
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 3.3e-104 382.5 345 58.8
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 4.3e-104 382.1 345 58.8
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 9.7e-104 380.9 342 57.3
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 2.4e-102 376.3 349 57.3
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 5.3e-102 375.2 302 59.9
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 6.9e-102 374.8 342 55.8
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 4.5e-101 372.1 343 56.3
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 2.2e-100 369.8 346 57.2
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 2.9e-100 369.4 303 60.7
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 3.2e-99 365.9 347 57.1
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 3.2e-99 365.9 347 57.1
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 7.2e-99 364.8 318 59.1
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 7.9e-98 361.3 306 60.1
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 6.7e-97 358.2 289 61.9
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 4.8e-95 352.1 363 52.6
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 2.4e-94 349.7 319 56.1
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 2.4e-94 349.7 313 59.1
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 9.4e-91 337.8 269 60.2
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 1.6e-90 337.0 245 66.5
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 2.1e-90 336.7 309 54.4
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 6.1e-90 335.1 220 69.5
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 1.0e-89 334.3 270 61.9
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 3.3e-88 329.3 284 60.9
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 5.7e-88 328.6 351 50.4
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 2.2e-87 326.6 237 65.4
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 4.0e-81 305.8 294 51.7
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 2.3e-73 280.0 244 57.8
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 9.5e-67 258.1 289 46.0
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 1.0e-65 254.6 302 46.0
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.5e-64 250.8 284 45.4
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 8.3e-63 245.0 386 36.8
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 2.0e-61 240.4 221 57.9
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 1.7e-60 237.3 218 56.9
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 3.6e-58 229.6 307 42.7
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 1.8e-57 227.3 217 52.5
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 1.5e-56 224.2 178 63.5
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 1.5e-51 207.6 256 39.8
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 3.7e-47 193.0 271 41.0
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 9.2e-46 188.3 174 52.9
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 3.3e-43 179.9 307 36.5
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 1.1e-38 164.9 179 53.1
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 2.1e-29 134.0 141 51.1
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 6.6e-28 129.0 110 52.7
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 2.5e-19 100.5 145 46.9
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 2.9e-15 87.0 162 35.2
MCO11G180 Micromonas commoda HOM05D006406 ORTHO05D007883 4.3e-11 73.2 216 30.6
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 3.7e-10 70.1 41 73.2
SMO172G0225 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 5.5e-06 56.2 78 41.0


User provided reference genes

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