Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0006435 Sechium edule HOM05D006969 ORTHO05D008826 7.1e-145 517.3 274 100.0
ClCG04G006330 Citrullus lanatus HOM05D006969 ORTHO05D008826 4.7e-80 302.0 198 83.3
CsaV3_4G027220 Cucumis sativus L. HOM05D006969 ORTHO05D008826 5.2e-79 298.5 192 84.9
MELO3C025225.2 Cucumis melo HOM05D006969 ORTHO05D008826 7.8e-75 284.6 208 77.4
Cfa017015 Carpinus fangiana HOM05D006969 ORTHO05D008826 1.4e-36 157.5 190 54.2
Haze_21189 Corylus avellana HOM05D006969 ORTHO05D008826 7.1e-36 155.2 186 53.8
Dinv16967 Davidia involucrata HOM05D006969 ORTHO05D008826 9.3e-36 154.8 181 56.9
Potri.016G138300 Populus trichocarpa HOM05D006969 ORTHO05D008826 1.3e-32 144.4 181 54.1
TWI74G1273 Tripterygium wilfordii HOM05D006969 ORTHO05D008826 1.3e-32 144.4 178 52.2
CiPaw.10G165400 Carya illinoinensis HOM05D006969 ORTHO05D008826 2.1e-32 143.7 191 48.7
Potri.006G109400 Populus trichocarpa HOM05D006969 ORTHO05D008826 4.8e-32 142.5 180 53.9
Manes.09G123300 Manihot esculenta HOM05D006969 ORTHO05D008826 8.2e-32 141.7 182 51.1
Sabra04G0154500 Salix brachista HOM05D006969 ORTHO05D008826 1.4e-31 141.0 183 52.5
TAR623G0846 Trochodendron aralioides HOM05D006969 ORTHO05D008826 2.4e-31 140.2 168 51.2
Prupe.6G295300 Prunus persica HOM05D006969 ORTHO05D008826 6.9e-31 138.7 182 48.9
Cpa.g.sc86.76 Carica papaya HOM05D006969 ORTHO05D008826 5.8e-30 135.6 185 48.1
Sabra06G0085100 Salix brachista HOM05D006969 ORTHO05D008826 1.3e-29 134.4 180 52.8
Thecc.04G150100 Theobroma cacao HOM05D006969 ORTHO05D008826 2.1e-27 127.1 205 47.8
QL07p031897 Quercus lobata HOM05D006969 ORTHO05D008826 2.7e-27 126.7 183 48.6
Hund19755 Selenicereus undatus HOM05D006969 ORTHO05D008826 2.7e-27 126.7 168 49.4
PGR004G2771 Punica granatum HOM05D006969 ORTHO05D008826 3.5e-27 126.3 175 48.0
GSVIVG01030170001 Vitis vinifera HOM05D006969 ORTHO05D008826 3.5e-27 126.3 159 53.5
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 4.6e-27 125.9 176 45.5
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 4.6e-27 125.9 176 45.5
Sc20g0007050 Simmondsia chinensis HOM05D006969 ORTHO05D008826 6.0e-27 125.6 178 50.0
FAN05G1635 Fragaria x ananassa HOM05D006969 ORTHO05D008826 7.9e-27 125.2 188 50.0
vmacro08948 Vaccinium macrocarpon HOM05D006969 ORTHO05D008826 1.0e-26 124.8 192 44.8
Duzib212G0164 Durio zibethinus HOM05D006969 ORTHO05D008826 1.3e-26 124.4 189 44.4
RcHm_v2.0_Chr3g0460321 Rosa chinensis HOM05D006969 ORTHO05D008826 1.8e-26 124.0 188 50.0
Cc06_g18790 Coffea canephora HOM05D006969 ORTHO05D008826 2.3e-26 123.6 169 48.5
FAN09G3593 Fragaria x ananassa HOM05D006969 ORTHO05D008826 2.3e-26 123.6 195 46.2
ECA248G1739 Erigeron canadensis HOM05D000251 ORTHO05D002506 3.9e-26 122.9 155 49.7
AUR62029780 Chenopodium quinoa HOM05D006969 ORTHO05D008826 5.1e-26 122.5 178 47.2
MD04G1175800 Malus domestica HOM05D006969 ORTHO05D008826 5.1e-26 122.5 172 49.4
FvH4_6g09670 Fragaria vesca HOM05D006969 ORTHO05D008826 8.7e-26 121.7 189 47.6
FAN14G4271 Fragaria x ananassa HOM05D006969 ORTHO05D008826 8.7e-26 121.7 189 47.6
AUR62006430 Chenopodium quinoa HOM05D006969 ORTHO05D008826 1.9e-25 120.6 171 46.2
Solyc06g082850.4 Solanum lycopersicum HOM05D006969 ORTHO05D008826 3.3e-25 119.8 211 43.1
HanXRQChr01g0000581 Helianthus annuus HOM05D006969 ORTHO05D008826 1.6e-24 117.5 187 45.5
Ah.15g089930 Amaranthus hybridus HOM05D006969 ORTHO05D008826 2.2e-24 117.1 191 44.0
FAN02G3877 Fragaria x ananassa HOM05D006969 ORTHO05D008826 3.7e-24 116.3 158 49.4
Sopen06g034210 Solanum pennellii HOM05D006969 ORTHO05D008826 8.2e-24 115.2 196 42.9
MSTRG.18936 Avicennia marina HOM05D006969 ORTHO05D008826 1.1e-23 114.8 145 50.3
Duzib151G0817 Durio zibethinus HOM05D006969 ORTHO05D008826 1.4e-23 114.4 141 49.6
MD05G1222900 Malus domestica HOM05D006969 ORTHO05D008826 1.4e-23 114.4 183 44.3
MD12G1190200 Malus domestica HOM05D006969 ORTHO05D008826 1.4e-23 114.4 183 44.3
Psat3g118680 Pisum sativum HOM05D006969 ORTHO05D008826 1.8e-23 114.0 185 44.9
TWI77G0392 Tripterygium wilfordii HOM05D006969 ORTHO05D008826 2.4e-23 113.6 112 58.9
Ciclev10013711m.g Citrus clementina HOM05D006969 ORTHO05D008826 3.1e-23 113.2 167 44.9
Medtr7g073500 Medicago truncatula HOM05D006969 ORTHO05D008826 3.1e-23 113.2 166 45.2
Aa31LG5G11450 Aethionema arabicum HOM05D006969 ORTHO05D008826 5.3e-23 112.5 155 51.6
Atru.chr8.92 Acer truncatum HOM05D006969 ORTHO05D008826 6.9e-23 112.1 132 53.8
Lj1g0009458 Lotus japonicus HOM05D006969 ORTHO05D008826 6.9e-23 112.1 186 43.0
MSTRG.5490 Avicennia marina HOM05D006969 ORTHO05D008826 9.0e-23 111.7 159 42.1
Gohir.D10G112800 Gossypium hirsutum HOM05D006969 ORTHO05D008826 9.0e-23 111.7 200 44.0
Aqoxy2G00712 Aquilegia oxysepala HOM05D006969 ORTHO05D008826 2.0e-22 110.5 158 44.9
Rhsim04G0121200 Rhododendron simsii HOM05D006969 ORTHO05D008826 2.0e-22 110.5 155 48.4
BcaB01g06123 Brassica carinata HOM05D006969 ORTHO05D008826 2.6e-22 110.2 160 48.1
Glyma.18G213000 Glycine max HOM05D006969 ORTHO05D008826 2.6e-22 110.2 145 49.7
Nitab4.5_0002758g0050 Nicotiana tabacum HOM05D006969 ORTHO05D008826 2.6e-22 110.2 150 47.3
VMungo1383G3295 Vigna mungo HOM05D006969 ORTHO05D008826 2.6e-22 110.2 146 49.3
BraA03t09395Z Brassica rapa HOM05D006969 ORTHO05D008826 3.4e-22 109.8 142 50.7
Glyma.09G273800 Glycine max HOM05D006969 ORTHO05D008826 3.4e-22 109.8 161 45.3
Gorai.011G124600 Gossypium raimondii HOM05D006969 ORTHO05D008826 3.4e-22 109.8 159 47.8
BolC3t12589H Brassica oleracea HOM05D006969 ORTHO05D008826 4.5e-22 109.4 142 50.7
CANSAT25G2928 Cannabis sativa HOM05D006969 ORTHO05D008826 4.5e-22 109.4 190 41.6
Gohir.A10G153400 Gossypium hirsutum HOM05D006969 ORTHO05D008826 4.5e-22 109.4 199 43.7
Thhalv10015463m.g Eutrema salsugineum HOM05D006969 ORTHO05D008826 1.3e-21 107.8 139 50.4
Lalb_Chr01g0023811 Lupinus albus HOM05D006969 ORTHO05D008826 1.7e-21 107.5 165 41.2
Phvul.008G081600 Phaseolus vulgaris HOM05D006969 ORTHO05D008826 1.7e-21 107.5 185 43.8
arahy.Tifrunner.gnm1.ann1.K8QDZW Arachis hypogaea HOM05D006969 ORTHO05D008826 2.2e-21 107.1 175 41.1
AL6G10120 Arabidopsis lyrata HOM05D006969 ORTHO05D008826 2.9e-21 106.7 165 47.9
BcaB01g04376 Brassica carinata HOM05D006969 ORTHO05D008826 3.8e-21 106.3 142 46.5
TPR.G24295 Trifolium pratense HOM05D006969 ORTHO05D008826 3.8e-21 106.3 107 56.1
Nitab4.5_0000048g0110 Nicotiana tabacum HOM05D006969 ORTHO05D008826 6.5e-21 105.5 148 46.6
Nitab4.5_0000430g0190 Nicotiana tabacum HOM05D006969 ORTHO05D008826 6.5e-21 105.5 153 45.8
PSO339G3220 Papaver somniferum HOM05D006969 ORTHO05D008826 1.1e-20 104.8 140 48.6
EL10Ac7g17114 Beta vulgaris HOM05D006969 ORTHO05D008826 1.9e-20 104.0 180 41.7
PSO384G0233 Papaver somniferum HOM05D006969 ORTHO05D008826 1.9e-20 104.0 142 47.9
PGSC0003DMG400027666 Solanum tuberosum HOM05D006969 ORTHO05D008826 1.9e-20 104.0 176 43.2
arahy.Tifrunner.gnm1.ann1.F2WGAE Arachis hypogaea HOM05D006969 ORTHO05D008826 2.5e-20 103.6 161 42.2
Gorai.005G003600 Gossypium raimondii HOM05D006969 ORTHO05D008826 3.2e-20 103.2 147 51.0
Carub.0024s0013 Capsella rubella HOM05D006969 ORTHO05D008826 5.5e-20 102.4 165 43.0
Gohir.A02G002800 Gossypium hirsutum HOM05D006969 ORTHO05D008826 5.5e-20 102.4 153 49.7
Gohir.D02G003100 Gossypium hirsutum HOM05D006969 ORTHO05D008826 7.2e-20 102.1 147 51.0
AT5G01910 Arabidopsis thaliana HOM05D006969 ORTHO05D008826 1.2e-19 101.3 136 47.8
QL07p007469 Quercus lobata HOM05D006969 ORTHO05D008826 2.7e-19 100.1 134 51.5
Migut.J00029 Erythranthe guttata HOM05D006969 ORTHO05D008826 3.6e-19 99.8 96 56.2
Sp6g41160 Schrenkiella parvula HOM05D006969 ORTHO05D008826 4.6e-19 99.4 153 43.8
Peaxi162Scf00732g00235 Petunia axillaris HOM05D006969 ORTHO05D008826 7.9e-19 98.6 135 47.4
unitig_22.g6613 Utricularia gibba HOM05D006969 ORTHO05D008826 1.0e-18 98.2 147 44.2
arahy.Tifrunner.gnm1.ann1.M5JM96 Arachis hypogaea HOM05D006969 ORTHO05D008826 2.3e-18 97.1 89 57.3
Oeu038184.1 Olea europaea HOM05D006969 ORTHO05D008826 3.0e-18 96.7 128 46.1
THA.LOC104823322 Tarenaya hassleriana HOM05D006969 ORTHO05D008826 3.9e-18 96.3 130 50.0
arahy.Tifrunner.gnm1.ann1.PQ2I5M Arachis hypogaea HOM05D006969 ORTHO05D008826 5.1e-18 95.9 161 41.0
COL.COLO4_03930 Corchorus olitorius HOM05D006969 ORTHO05D008826 1.5e-17 94.4 178 41.0
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 4.3e-17 92.8 89 55.1
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 4.3e-17 92.8 89 55.1
Lsat_1_v5_gn_5_152061 Lactuca sativa HOM05D006969 ORTHO05D008826 4.3e-17 92.8 181 40.9
A03p00060 Brassica napus HOM05D006969 ORTHO05D008826 9.7e-17 91.7 125 49.6
C03p00200 Brassica napus HOM05D006969 ORTHO05D008826 9.7e-17 91.7 138 47.1
CARHR212260 Cardamine hirsuta HOM05D006969 ORTHO05D008826 2.2e-16 90.5 141 44.7
SalBow7G4609 Salvia bowleyana HOM05D006969 ORTHO05D008826 3.1e-15 86.7 109 50.5
DCAR_023968 Daucus carota HOM05D006969 ORTHO05D008826 1.5e-14 84.3 173 36.4
vmacro08947 Vaccinium macrocarpon HOM05D000266 ORTHO05D008826 3.4e-14 83.2 106 47.2
CDE06G1555 Ceratophyllum demersum HOM05D006969 ORTHO05D008826 3.8e-13 79.7 98 46.9
Rhsim04G0114700 Rhododendron simsii HOM05D006969 ORTHO05D008826 1.4e-12 77.8 81 54.3
CDE07G1521 Ceratophyllum demersum HOM05D006969 ORTHO05D008826 3.2e-12 76.6 137 40.1
MBI03_g05807_MAGBIO Magnolia biondii HOM05D006969 ORTHO05D008826 9.4e-12 75.1 145 38.6
Rhsim03G0028100 Rhododendron simsii HOM05D006969 ORTHO05D008826 6.1e-11 72.4 85 52.9
Nn5g26829 Nelumbo nucifera HOM05D006969 ORTHO05D008826 7.9e-11 72.0 126 42.9
unitig_8.g3270 Utricularia gibba HOM05D006969 ORTHO05D008826 1.0e-10 71.6 72 52.8
Nitab4.5_0002655g0130 Nicotiana tabacum HOM05D006969 ORTHO05D008826 1.8e-10 70.9 80 46.2
Rhsim08G0240100 Rhododendron simsii HOM05D006969 ORTHO05D008826 1.8e-10 70.9 85 54.1
Oeu060427.1 Olea europaea HOM05D006969 ORTHO05D008826 2.3e-10 70.5 58 58.6
HPP92_022865 Vanilla planifolia HOM05D006969 ORTHO05D008826 1.2e-06 58.2 157 34.4
Glyma.19G150200 Glycine max HOM05D006969 ORTHO05D008826 3.4e-06 56.6 88 40.9


User provided reference genes

Program Settings