Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0006433 Sechium edule HOM05D007414 ORTHO05D009482 5.5e-218 760.8 405 100.0
CsaV3_5G024500 Cucumis sativus L. HOM05D007414 ORTHO05D009482 5.2e-168 594.7 384 81.0
ClCG01G007530 Citrullus lanatus HOM05D007414 ORTHO05D009482 3.2e-165 585.5 396 81.3
MELO3C005149.2 Cucumis melo HOM05D007414 ORTHO05D009482 2.7e-164 582.4 406 76.1
QL04p017831 Quercus lobata HOM05D007414 ORTHO05D009482 7.3e-138 494.6 347 70.6
TAR623G0974 Trochodendron aralioides HOM05D007414 ORTHO05D009482 1.1e-136 490.7 324 73.5
COL.COLO4_20658 Corchorus olitorius HOM05D007414 ORTHO05D009482 1.4e-136 490.3 338 71.9
Duzib114G0511 Durio zibethinus HOM05D007414 ORTHO05D009482 4.9e-134 481.9 380 65.0
CANSAT56G3550 Cannabis sativa HOM05D007414 ORTHO05D009482 1.1e-133 480.7 342 70.5
Hma1.2p1_1202F.1_g266840 Hydrangea macrophylla HOM05D007414 ORTHO05D009482 3.2e-133 479.2 326 70.9
CiPaw.13G013700 Carya illinoinensis HOM05D007414 ORTHO05D009482 5.4e-133 478.4 383 66.8
TWI15G0498 Tripterygium wilfordii HOM05D007414 ORTHO05D009482 9.3e-133 477.6 370 65.7
GSVIVG01013487001 Vitis vinifera HOM05D007414 ORTHO05D009482 4.6e-132 475.3 378 65.6
RcHm_v2.0_Chr1g0324301 Rosa chinensis HOM05D007414 ORTHO05D009482 2.3e-131 473.0 339 70.2
Gorai.010G216100 Gossypium raimondii HOM05D007414 ORTHO05D009482 3.0e-131 472.6 377 66.0
Thecc.10G154500 Theobroma cacao HOM05D007414 ORTHO05D009482 3.9e-131 472.2 382 64.1
Atru.chr12.1333 Acer truncatum HOM05D007414 ORTHO05D009482 1.9e-130 469.9 335 69.9
Manes.11G006000 Manihot esculenta HOM05D007414 ORTHO05D009482 2.5e-130 469.5 339 68.7
Nn7g36686 Nelumbo nucifera HOM05D007414 ORTHO05D009482 3.3e-130 469.2 329 70.2
Dinv22037 Davidia involucrata HOM05D007414 ORTHO05D009482 7.3e-130 468.0 322 70.5
FAN03G2686 Fragaria x ananassa HOM05D007414 ORTHO05D009482 7.3e-130 468.0 381 63.5
MD02G1287000 Malus domestica HOM05D007414 ORTHO05D009482 9.6e-130 467.6 324 71.9
FAN06G2659 Fragaria x ananassa HOM05D007414 ORTHO05D009482 2.8e-129 466.1 381 63.3
FvH4_7g03070 Fragaria vesca HOM05D006097 ORTHO05D008538 3.6e-129 465.7 381 63.3
Gohir.D06G184800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 3.6e-129 465.7 378 65.9
Gohir.A06G174800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 4.8e-129 465.3 378 65.3
FAN10G2712 Fragaria x ananassa HOM05D007414 ORTHO05D009482 1.1e-128 464.2 371 63.3
PGR031G2549 Punica granatum HOM05D007414 ORTHO05D009482 1.2e-127 460.7 342 67.0
Potri.001G027600 Populus trichocarpa HOM05D007414 ORTHO05D009482 2.0e-127 459.9 357 64.1
Eucgr.G03234 Eucalyptus grandis HOM05D007414 ORTHO05D009482 3.4e-127 459.1 335 68.7
Actinidia02265 Actinidia chinensis HOM05D007414 ORTHO05D009482 6.4e-126 454.9 339 66.4
Medtr3g014680 Medicago truncatula HOM05D007414 ORTHO05D009482 6.4e-126 454.9 341 66.6
vmacro12698 Vaccinium macrocarpon HOM05D007414 ORTHO05D009482 1.9e-125 453.4 336 66.1
Gohir.A10G185400 Gossypium hirsutum HOM05D007414 ORTHO05D009482 7.1e-125 451.4 340 65.9
Gorai.011G215300 Gossypium raimondii HOM05D007414 ORTHO05D009482 7.1e-125 451.4 340 65.6
Gohir.D10G192600 Gossypium hirsutum HOM05D007414 ORTHO05D009482 9.3e-125 451.1 340 65.3
CSS0022385 Camellia sinensis var. sinensis HOM05D007414 ORTHO05D009482 4.6e-124 448.7 325 67.4
Ciclev10028543m.g Citrus clementina HOM05D007414 ORTHO05D009482 6.0e-124 448.4 342 66.4
Sabra01G0020000 Salix brachista HOM05D007414 ORTHO05D009482 1.8e-123 446.8 389 59.4
DCAR_031835 Daucus carota HOM05D007414 ORTHO05D009482 6.7e-123 444.9 323 67.2
PGSC0003DMG400018334 Solanum tuberosum HOM05D007414 ORTHO05D009482 6.7e-123 444.9 370 59.5
MSTRG.20514 Avicennia marina HOM05D007414 ORTHO05D009482 1.5e-122 443.7 327 66.7
Lsat_1_v5_gn_4_29901 Lactuca sativa HOM05D007414 ORTHO05D009482 4.3e-122 442.2 326 66.0
Glyma.04G137000 Glycine max HOM05D007414 ORTHO05D009482 7.4e-122 441.4 337 65.3
VMungo1080G1369 Vigna mungo HOM05D007414 ORTHO05D009482 7.4e-122 441.4 337 65.9
arahy.Tifrunner.gnm1.ann1.GMDI7B Arachis hypogaea HOM05D007414 ORTHO05D009482 1.3e-121 440.7 336 65.8
Solyc01g096400.4 Solanum lycopersicum HOM05D007414 ORTHO05D009482 1.3e-121 440.7 349 63.3
Sopen01g040130 Solanum pennellii HOM05D007414 ORTHO05D009482 1.6e-121 440.3 351 63.0
HanXRQChr16g0525321 Helianthus annuus HOM05D007414 ORTHO05D009482 2.1e-121 439.9 336 64.6
Phvul.005G026400 Phaseolus vulgaris HOM05D007414 ORTHO05D009482 1.1e-120 437.6 334 66.5
arahy.Tifrunner.gnm1.ann1.XZAR1L Arachis hypogaea HOM05D007414 ORTHO05D009482 1.4e-120 437.2 336 64.6
Glyma.11G155300 Glycine max HOM05D007414 ORTHO05D009482 4.0e-120 435.6 337 64.4
Cc02_g30210 Coffea canephora HOM05D007414 ORTHO05D009482 9.0e-120 434.5 323 65.0
Lalb_Chr25g0282101 Lupinus albus HOM05D007414 ORTHO05D009482 4.5e-119 432.2 331 65.3
ECA234G1800 Erigeron canadensis HOM05D007414 ORTHO05D009482 5.8e-119 431.8 322 65.8
Lj3g0021878 Lotus japonicus HOM05D007414 ORTHO05D009482 1.7e-118 430.3 332 64.8
Nitab4.5_0004955g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 1.7e-118 430.3 330 63.0
AUR62032647 Chenopodium quinoa HOM05D007414 ORTHO05D009482 1.9e-117 426.8 324 65.1
Nitab4.5_0000307g0260 Nicotiana tabacum HOM05D007414 ORTHO05D009482 3.2e-117 426.0 320 65.0
CAN.G1045.37 Capsicum annuum HOM05D007414 ORTHO05D009482 3.5e-116 422.5 371 58.2
Peaxi162Scf00767g00524 Petunia axillaris HOM05D007414 ORTHO05D009482 1.1e-114 417.5 332 61.7
THA.LOC104826727 Tarenaya hassleriana HOM05D007414 ORTHO05D009482 1.1e-112 411.0 320 65.0
Rhsim01G0124300 Rhododendron simsii HOM05D007414 ORTHO05D009482 4.0e-112 409.1 333 62.5
PSO384G0147 Papaver somniferum HOM05D007414 ORTHO05D009482 3.4e-111 406.0 323 63.2
Sc11g0006450 Simmondsia chinensis HOM05D007414 ORTHO05D009482 3.4e-111 406.0 323 62.8
Manes.15G192920 Manihot esculenta HOM05D007414 ORTHO05D009482 2.9e-110 402.9 346 61.0
PSO339G0457 Papaver somniferum HOM05D007414 ORTHO05D009482 6.5e-110 401.7 321 62.6
Potri.003G196200 Populus trichocarpa HOM05D007414 ORTHO05D009482 3.2e-109 399.4 340 58.5
Aqoxy1G00360 Aquilegia oxysepala HOM05D007414 ORTHO05D009482 9.3e-109 397.9 347 59.4
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 7.9e-108 394.8 298 65.1
ATR0745G014 Amborella trichopoda HOM05D007414 ORTHO05D009482 6.7e-107 391.7 345 58.3
Haze_03038 Corylus avellana HOM05D007414 ORTHO05D009482 7.4e-106 388.3 325 65.5
EL10Ac2g02800 Beta vulgaris HOM05D007414 ORTHO05D009482 2.8e-105 386.3 358 56.1
Nn7g36678 Nelumbo nucifera HOM05D007414 ORTHO05D009482 6.5e-102 375.2 325 59.4
Hund13359 Selenicereus undatus HOM05D007414 ORTHO05D009482 5.3e-96 355.5 334 56.0
AUR62026859 Chenopodium quinoa HOM05D007414 ORTHO05D009482 3.2e-93 346.3 258 64.0
Dinv32026 Davidia involucrata HOM05D007414 ORTHO05D009482 2.1e-92 343.6 261 64.0
Prupe.2G036300 Prunus persica HOM05D007414 ORTHO05D009482 7.9e-92 341.7 245 68.6
SEGI_40936 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 1.5e-87 327.4 342 51.8
Psat5g222240 Pisum sativum HOM05D007414 ORTHO05D009482 3.8e-86 322.8 240 65.8
MBI19_g25612_MAGBIO Magnolia biondii HOM05D007414 ORTHO05D009482 6.5e-70 268.9 268 55.2
Migut.O00949 Erythranthe guttata HOM05D007414 ORTHO05D009482 9.4e-69 265.0 208 63.5
AagrBONN_evm.TU.Sc2ySwM_362.1466 Anthoceros agrestis HOM05D007414 ORTHO05D009482 4.7e-60 236.1 339 40.7
Pp3c11_910 Physcomitrium patens HOM05D007414 ORTHO05D009482 1.3e-57 228.0 339 41.6
Mapoly0007s0139 Marchantia polymorpha HOM05D007414 ORTHO05D009482 3.7e-57 226.5 388 36.9
Zm00001eb128490 Zea mays HOM05D007414 ORTHO05D009482 1.1e-53 214.9 222 51.8
Os01g0272800 Oryza sativa ssp. japonica HOM05D007414 ORTHO05D009482 2.6e-42 177.2 155 60.0
DCAR_000332 Daucus carota HOM05D007414 ORTHO05D009482 9.8e-42 175.3 117 72.6
TPR.G1409 Trifolium pratense HOM05D007414 ORTHO05D009482 1.5e-37 161.4 131 61.1
Migut.B01233 Erythranthe guttata HOM05D007414 ORTHO05D009482 5.2e-35 152.9 116 61.2
Nitab4.5_0008639g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 1.0e-30 138.7 122 54.9
Lsat_1_v5_gn_0_2021 Lactuca sativa HOM05D007414 ORTHO05D009482 1.1e-13 82.0 78 50.0
PRCOL_00005884 Prasinoderma coloniale HOM05D007414 ORTHO05D009482 2.4e-11 74.3 257 26.8
SEGI_36011 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 5.3e-11 73.2 48 70.8
Lsat_1_v5_gn_3_3821 Lactuca sativa HOM05D007414 ORTHO05D009482 9.9e-10 68.9 49 61.2
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 4.2e-08 63.5 358 23.5
Aa31LG6G1850 Aethionema arabicum HOM05D006098 ORTHO05D007470 5.4e-08 63.2 350 23.1
MD02G1286500 Malus domestica HOM05D007414 ORTHO05D009482 6.0e-07 59.7 73 45.2
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 6.0e-07 59.7 366 24.3
AUR62010477 Chenopodium quinoa HOM05D006098 ORTHO05D007470 7.9e-07 59.3 355 22.0
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 7.9e-07 59.3 366 24.3
AL7G34930 Arabidopsis lyrata HOM05D006098 ORTHO05D007470 2.3e-06 57.8 352 21.6
Actinidia18166 Actinidia chinensis HOM05D006098 ORTHO05D007470 5.1e-06 56.6 351 23.1
THA.LOC104811082 Tarenaya hassleriana HOM05D006098 ORTHO05D007470 5.1e-06 56.6 354 22.9
Cre03.g145067 Chlamydomonas reinhardtii HOM05D007414 ORTHO05D009482 8.7e-06 55.8 75 44.0
PRCOL_00006348 Prasinoderma coloniale HOM05D007414 ORTHO05D333730 8.7e-06 55.8 122 32.0


User provided reference genes

Program Settings