Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0006415 Sechium edule HOM05D004328 ORTHO05D005210 1.1e-158 563.1 261 100.0
Sed0022403 Sechium edule HOM05D004328 ORTHO05D005210 2.3e-145 518.8 252 94.0
MELO3C003305.2 Cucumis melo HOM05D004328 ORTHO05D005210 1.2e-136 490.0 252 89.3
CiPaw.06G036200 Carya illinoinensis HOM05D004328 ORTHO05D005210 4.4e-128 461.5 247 85.0
MD14G1015000 Malus domestica HOM05D004328 ORTHO05D005210 4.4e-128 461.5 255 82.4
Haze_00368 Corylus avellana HOM05D004328 ORTHO05D005210 5.8e-128 461.1 237 87.8
FAN05G3798 Fragaria x ananassa HOM05D004328 ORTHO05D005210 7.6e-128 460.7 250 84.0
Prupe.7G118400 Prunus persica HOM05D004328 ORTHO05D005210 7.6e-128 460.7 256 82.0
Ca_24428_v3 Cicer arietinum L. HOM05D004328 ORTHO05D005210 1.3e-127 459.9 253 82.6
FvH4_6g17800 Fragaria vesca HOM05D004328 ORTHO05D005210 1.3e-127 459.9 253 82.6
FAN02G3409 Fragaria x ananassa HOM05D004328 ORTHO05D005210 2.2e-127 459.1 250 83.6
CiPaw.05G212500 Carya illinoinensis HOM05D004328 ORTHO05D005210 2.9e-127 458.8 255 80.4
arahy.Tifrunner.gnm1.ann1.BXRJ0F Arachis hypogaea HOM05D004328 ORTHO05D005210 3.7e-127 458.4 254 81.9
Duzib177G0674 Durio zibethinus HOM05D004328 ORTHO05D005210 3.7e-127 458.4 254 81.9
FAN05G2947 Fragaria x ananassa HOM05D004328 ORTHO05D005210 3.7e-127 458.4 250 83.6
MD12G1017300 Malus domestica HOM05D004328 ORTHO05D005210 6.4e-127 457.6 256 81.6
Potri.011G117500 Populus trichocarpa HOM05D004328 ORTHO05D005210 6.4e-127 457.6 249 82.7
TWI60G0134 Tripterygium wilfordii HOM05D004328 ORTHO05D005210 6.4e-127 457.6 253 79.4
Thecc.05G223000 Theobroma cacao HOM05D004328 ORTHO05D005210 8.4e-127 457.2 247 83.4
Aa31LG2G2180 Aethionema arabicum HOM05D004328 ORTHO05D005210 2.4e-126 455.7 248 82.7
Medtr5g007050 Medicago truncatula HOM05D004328 ORTHO05D005210 3.2e-126 455.3 237 86.1
QL09p020622 Quercus lobata HOM05D004328 ORTHO05D005210 3.2e-126 455.3 237 85.7
RcHm_v2.0_Chr3g0472051 Rosa chinensis HOM05D004328 ORTHO05D005210 3.2e-126 455.3 250 83.2
Glyma.01G234500 Glycine max HOM05D004328 ORTHO05D005210 4.1e-126 454.9 249 83.1
Medtr6g046960 Medicago truncatula HOM05D004328 ORTHO05D005210 4.1e-126 454.9 237 86.1
Sp5g19300 Schrenkiella parvula HOM05D004328 ORTHO05D005210 7.1e-126 454.1 237 85.7
TPR.G37879 Trifolium pratense HOM05D004328 ORTHO05D005210 7.1e-126 454.1 252 81.3
Gorai.004G255800 Gossypium raimondii HOM05D004328 ORTHO05D005210 9.2e-126 453.8 253 80.2
Duzib128G0566 Durio zibethinus HOM05D004328 ORTHO05D005210 1.2e-125 453.4 239 84.5
Glyma.11G008400 Glycine max HOM05D004328 ORTHO05D005210 1.2e-125 453.4 257 80.5
AT1G64980 Arabidopsis thaliana HOM05D004328 ORTHO05D005210 1.6e-125 453.0 253 80.2
Thhalv10019022m.g Eutrema salsugineum HOM05D004328 ORTHO05D005210 1.6e-125 453.0 238 85.3
AL2G19530 Arabidopsis lyrata HOM05D004328 ORTHO05D005210 2.1e-125 452.6 253 79.4
Psat2g189640 Pisum sativum HOM05D004328 ORTHO05D005210 2.1e-125 452.6 236 84.3
Gohir.D08G240500 Gossypium hirsutum HOM05D004328 ORTHO05D005210 3.5e-125 451.8 253 79.8
COL.COLO4_15130 Corchorus olitorius HOM05D004328 ORTHO05D005210 6.0e-125 451.1 244 83.2
THA.LOC104823797 Tarenaya hassleriana HOM05D004328 ORTHO05D005210 7.8e-125 450.7 245 82.0
BcaB05g24072 Brassica carinata HOM05D004328 ORTHO05D005210 1.0e-124 450.3 257 78.6
Carub.0002s1013 Capsella rubella HOM05D004328 ORTHO05D005210 1.3e-124 449.9 251 80.9
Potri.019G042500 Populus trichocarpa HOM05D004328 ORTHO05D005210 1.3e-124 449.9 253 80.6
Phvul.002G041900 Phaseolus vulgaris HOM05D004328 ORTHO05D005210 1.7e-124 449.5 240 84.6
CARHR056380 Cardamine hirsuta HOM05D004328 ORTHO05D005210 3.0e-124 448.7 247 81.8
Gohir.A08G221646 Gossypium hirsutum HOM05D004328 ORTHO05D005210 3.9e-124 448.4 253 79.1
Manes.08G160500 Manihot esculenta HOM05D004328 ORTHO05D005210 5.1e-124 448.0 235 85.5
VMungo1215G1960 Vigna mungo HOM05D004328 ORTHO05D005210 5.1e-124 448.0 247 82.2
Sabra11G0102700 Salix brachista HOM05D004328 ORTHO05D005210 1.5e-123 446.4 250 81.2
Ciclev10032525m.g Citrus clementina HOM05D004328 ORTHO05D005210 1.9e-123 446.0 233 85.8
Phvul.011G017300 Phaseolus vulgaris HOM05D004328 ORTHO05D005210 2.5e-123 445.7 233 83.7
Atru.chr12.1869 Acer truncatum HOM05D004328 ORTHO05D005210 5.6e-123 444.5 247 82.6
Prupe.2G050300 Prunus persica HOM05D004328 ORTHO05D005210 7.3e-123 444.1 238 82.4
Lalb_Chr09g0320061 Lupinus albus HOM05D004328 ORTHO05D005210 1.2e-122 443.4 258 79.5
Glyma.12G014400 Glycine max HOM05D004328 ORTHO05D005210 2.1e-122 442.6 239 83.7
LjContig00222g0018106 Lotus japonicus HOM05D004328 ORTHO05D005210 2.1e-122 442.6 239 81.6
VMungo1127G1200 Vigna mungo HOM05D004328 ORTHO05D005210 2.1e-122 442.6 231 85.3
THA.LOC104805717 Tarenaya hassleriana HOM05D004328 ORTHO05D005210 2.8e-122 442.2 238 82.8
Sabra19G0052600 Salix brachista HOM05D004328 ORTHO05D005210 3.6e-122 441.8 249 80.7
C02p21060 Brassica napus HOM05D004328 ORTHO05D005210 1.8e-121 439.5 234 83.3
Eucgr.F02577 Eucalyptus grandis HOM05D004328 ORTHO05D005210 1.8e-121 439.5 247 80.6
Manes.09G129900 Manihot esculenta HOM05D004328 ORTHO05D005210 3.1e-121 438.7 234 83.3
Gorai.003G058000 Gossypium raimondii HOM05D004328 ORTHO05D005210 6.8e-121 437.6 248 80.6
BcaC03g14669 Brassica carinata HOM05D004328 ORTHO05D005210 8.9e-121 437.2 234 82.9
A02p12950 Brassica napus HOM05D004328 ORTHO05D005210 8.9e-121 437.2 235 82.6
BolC2t08247H Brassica oleracea HOM05D004328 ORTHO05D005210 8.9e-121 437.2 234 82.9
BraA02t06349Z Brassica rapa HOM05D004328 ORTHO05D005210 1.2e-120 436.8 235 82.1
Gohir.A02G114200 Gossypium hirsutum HOM05D004328 ORTHO05D005210 1.2e-120 436.8 248 80.2
Nitab4.5_0002424g0020 Nicotiana tabacum HOM05D004328 ORTHO05D005210 1.5e-120 436.4 246 77.2
Gohir.D03G055200 Gossypium hirsutum HOM05D004328 ORTHO05D005210 2.0e-120 436.0 248 80.6
BraA07t30899Z Brassica rapa HOM05D004328 ORTHO05D005210 5.8e-120 434.5 240 81.2
Nitab4.5_0003848g0010 Nicotiana tabacum HOM05D004328 ORTHO05D005210 5.8e-120 434.5 251 75.7
PSO063G4889 Papaver somniferum HOM05D004328 ORTHO05D005210 1.3e-119 433.3 251 77.7
PGR102G1437 Punica granatum HOM05D004328 ORTHO05D005210 2.2e-119 432.6 233 81.1
Actinidia28583 Actinidia chinensis HOM05D004328 ORTHO05D005210 2.9e-119 432.2 248 76.6
BolC6t38986H Brassica oleracea HOM05D004328 ORTHO05D005210 2.9e-119 432.2 240 80.8
Lj5C63T9 Lonicera japonica HOM05D004328 ORTHO05D005210 2.9e-119 432.2 250 78.8
BcaB03g15334 Brassica carinata HOM05D004328 ORTHO05D005210 3.8e-119 431.8 240 80.8
A07p32730 Brassica napus HOM05D004328 ORTHO05D005210 3.8e-119 431.8 240 80.8
C06p38940 Brassica napus HOM05D004328 ORTHO05D005210 3.8e-119 431.8 240 80.8
Hma1.2p1_0682F.1_g202590 Hydrangea macrophylla HOM05D004328 ORTHO05D005210 3.8e-119 431.8 252 75.4
Ah.01g021090 Amaranthus hybridus HOM05D004738 ORTHO05D006439 4.9e-119 431.4 248 77.4
Hma1.2p1_0317F.1_g123230 Hydrangea macrophylla HOM05D004328 ORTHO05D005210 4.9e-119 431.4 249 77.1
Sc10g0005470 Simmondsia chinensis HOM05D004328 ORTHO05D005210 4.9e-119 431.4 235 81.3
Nitab4.5_0000862g0040 Nicotiana tabacum HOM05D004328 ORTHO05D005210 6.4e-119 431.0 249 75.9
PSO782G5014 Papaver somniferum HOM05D004328 ORTHO05D005210 6.4e-119 431.0 251 77.7
Peaxi162Scf00015g00027 Petunia axillaris HOM05D004328 ORTHO05D005210 6.4e-119 431.0 245 76.3
CSS0022667 Camellia sinensis var. sinensis HOM05D004328 ORTHO05D005210 1.4e-118 429.9 236 80.5
Carub.0005s0946 Capsella rubella HOM05D004328 ORTHO05D005210 1.4e-118 429.9 239 79.5
Cc01_g03290 Coffea canephora HOM05D004328 ORTHO05D005210 1.4e-118 429.9 235 80.0
Nitab4.5_0008539g0020 Nicotiana tabacum HOM05D004328 ORTHO05D005210 1.9e-118 429.5 244 76.6
AUR62011605 Chenopodium quinoa HOM05D004328 ORTHO05D005210 3.2e-118 428.7 229 83.4
TAR629G0545 Trochodendron aralioides HOM05D004328 ORTHO05D005210 3.2e-118 428.7 248 76.2
Oeu014856.1 Olea europaea HOM05D004328 ORTHO05D005210 4.2e-118 428.3 248 77.0
Hund00585 Selenicereus undatus HOM05D004328 ORTHO05D005210 4.2e-118 428.3 238 80.3
BcaB03g15336 Brassica carinata HOM05D004328 ORTHO05D005210 7.1e-118 427.6 238 80.7
EL10Ac9g21975 Beta vulgaris HOM05D004328 ORTHO05D005210 2.1e-117 426.0 236 80.5
CAN.G395.24 Capsicum annuum HOM05D004328 ORTHO05D005210 2.1e-117 426.0 248 76.2
Lj9P505T43 Lonicera japonica HOM05D004328 ORTHO05D005210 2.7e-117 425.6 232 81.9
CAN.G438.47 Capsicum annuum HOM05D004328 ORTHO05D005210 6.0e-117 424.5 233 79.8
Oeu022420.1 Olea europaea HOM05D004328 ORTHO05D005210 6.0e-117 424.5 248 75.4
vmacro16940 Vaccinium macrocarpon HOM05D004328 ORTHO05D005210 1.0e-116 423.7 239 79.1
PGSC0003DMG400016515 Solanum tuberosum HOM05D004328 ORTHO05D005210 2.3e-116 422.5 234 78.6
CANSAT21G1275 Cannabis sativa HOM05D004328 ORTHO05D005210 3.0e-116 422.2 246 77.2
Sopen06g025090 Solanum pennellii HOM05D004328 ORTHO05D005210 3.0e-116 422.2 234 78.2
PGSC0003DMG400002634 Solanum tuberosum HOM05D004328 ORTHO05D005210 3.9e-116 421.8 233 79.4
MSTRG.4726 Avicennia marina HOM05D004328 ORTHO05D005210 5.1e-116 421.4 234 78.2
Sopen03g039300 Solanum pennellii HOM05D004328 ORTHO05D005210 6.6e-116 421.0 233 79.0
SGA_v2.0_scaffold117G32383 Striga asiatica HOM05D004328 ORTHO05D005210 6.6e-116 421.0 232 79.7
Rhsim12G0195900 Rhododendron simsii HOM05D004328 ORTHO05D005210 1.1e-115 420.2 233 79.4
CDE02G2329 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 1.5e-115 419.9 234 79.1
unitig_744.g24340 Utricularia gibba HOM05D004328 ORTHO05D005210 1.9e-115 419.5 246 75.6
Aqoxy7G02544 Aquilegia oxysepala HOM05D004328 ORTHO05D005210 2.5e-115 419.1 243 76.5
Solyc06g066800.2 Solanum lycopersicum HOM05D004328 ORTHO05D005210 4.3e-115 418.3 234 77.8
Lsat_1_v5_gn_5_129800 Lactuca sativa HOM05D004328 ORTHO05D005210 7.3e-115 417.5 245 75.9
SalBow2G3647 Salvia bowleyana HOM05D004328 ORTHO05D005210 7.3e-115 417.5 236 78.0
Lsat_1_v5_gn_4_104460 Lactuca sativa HOM05D004328 ORTHO05D005210 9.6e-115 417.2 247 75.3
ECA232G0498 Erigeron canadensis HOM05D004328 ORTHO05D005210 1.6e-114 416.4 237 77.6
HanXRQChr09g0275421 Helianthus annuus HOM05D004328 ORTHO05D005210 2.1e-114 416.0 253 73.9
SalBow2G0585 Salvia bowleyana HOM05D004328 ORTHO05D005210 2.8e-114 415.6 233 78.5
Peaxi162Scf00207g00087 Petunia axillaris HOM05D004328 ORTHO05D005210 4.8e-114 414.8 240 76.2
PSO135G0870 Papaver somniferum HOM05D004328 ORTHO05D005210 8.1e-114 414.1 252 74.6
PSO384G3958 Papaver somniferum HOM05D004328 ORTHO05D005210 8.1e-114 414.1 252 75.4
MSTRG.11095 Avicennia marina HOM05D004328 ORTHO05D005210 1.1e-113 413.7 233 77.3
MBI04_g30767_MAGBIO Magnolia biondii HOM05D004328 ORTHO05D005210 2.4e-113 412.5 232 78.9
PSO384G1513 Papaver somniferum HOM05D004328 ORTHO05D005210 2.4e-113 412.5 249 74.7
Migut.I00840 Erythranthe guttata HOM05D004328 ORTHO05D005210 3.1e-113 412.1 234 76.1
PSO675G2272 Papaver somniferum HOM05D004328 ORTHO05D005210 4.0e-113 411.8 251 72.5
unitig_21.g20512 Utricularia gibba HOM05D004328 ORTHO05D005210 5.3e-113 411.4 248 73.4
CDE06G0667 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 9.0e-113 410.6 248 74.2
Aqoxy3G03943 Aquilegia oxysepala HOM05D004328 ORTHO05D005210 1.2e-112 410.2 232 78.0
DCAR_007553 Daucus carota HOM05D004328 ORTHO05D005210 1.2e-112 410.2 234 78.2
SalBow2G3162 Salvia bowleyana HOM05D004328 ORTHO05D005210 1.2e-112 410.2 227 78.0
Nn3g21153 Nelumbo nucifera HOM05D004328 ORTHO05D005210 2.0e-112 409.5 236 75.0
Nn8g40188 Nelumbo nucifera HOM05D004328 ORTHO05D005210 2.6e-112 409.1 230 77.4
SHI15002 Sapria himalayana HOM05D004328 ORTHO05D005210 2.9e-111 405.6 226 79.6
PSO502G0015 Papaver somniferum HOM05D004328 ORTHO05D005210 4.9e-111 404.8 251 71.7
ATR0829G052 Amborella trichopoda HOM05D004328 ORTHO05D005210 1.2e-109 400.2 229 75.5
HanXRQChr14g0455981 Helianthus annuus HOM05D004328 ORTHO05D005210 1.2e-109 400.2 233 73.4
AUR62016419 Chenopodium quinoa HOM05D004328 ORTHO05D005210 4.6e-109 398.3 212 84.0
HPP92_014971 Vanilla planifolia HOM05D004328 ORTHO05D005210 3.9e-108 395.2 239 74.9
ECA234G3285 Erigeron canadensis HOM05D004328 ORTHO05D005210 2.1e-106 389.4 246 70.3
SEGI_26076 Sequoiadendron giganteum HOM05D004328 ORTHO05D005210 4.0e-105 385.2 229 74.2
SEGI_10122 Sequoiadendron giganteum HOM05D004328 ORTHO05D005210 9.9e-104 380.6 244 68.9
Cpa.g.sc43.145 Carica papaya HOM05D004328 ORTHO05D005210 1.7e-103 379.8 205 84.4
unitig_578.g16690 Utricularia gibba HOM05D004328 ORTHO05D005210 1.7e-103 379.8 252 67.1
Os07g0413800 Oryza sativa ssp. japonica HOM05D004328 ORTHO05D005210 3.5e-101 372.1 241 68.5
Zm00001eb192470 Zea mays HOM05D004328 ORTHO05D005210 4.3e-99 365.2 248 67.3
Os10g0516400 Oryza sativa ssp. japonica HOM05D004328 ORTHO05D005210 9.6e-99 364.0 246 65.9
Zm00001eb062050 Zea mays HOM05D004328 ORTHO05D005210 5.8e-96 354.8 252 64.7
SMO118G0121 Selaginella moellendorffii HOM05D004328 ORTHO05D005210 1.3e-95 353.6 223 70.0
CBR_g51102 Chara braunii HOM05D004328 ORTHO05D005210 6.5e-95 351.3 227 67.0
AagrBONN_evm.TU.Sc2ySwM_362.571 Anthoceros agrestis HOM05D004328 ORTHO05D005210 8.7e-92 340.9 226 64.6
MD07G1085100 Malus domestica HOM05D004328 ORTHO05D005210 1.8e-89 333.2 244 64.3
GSVIVG01024323001 Vitis vinifera HOM05D004328 ORTHO05D005210 1.9e-83 313.2 177 80.8
Hma1.2p1_0323F.1_g125290 Hydrangea macrophylla HOM05D004328 ORTHO05D005210 1.7e-79 300.1 249 58.2
Cc04_g03630 Coffea canephora HOM05D004328 ORTHO05D005210 3.8e-79 298.9 160 81.2
Solyc03g120410.3 Solanum lycopersicum HOM05D004328 ORTHO05D005210 3.3e-75 285.8 156 79.5
Pp3c20_18260 Physcomitrium patens HOM05D004328 ORTHO05D005210 1.2e-61 240.7 166 63.3
Haze_27513 Corylus avellana HOM05D004328 ORTHO05D005210 9.1e-57 224.6 218 48.6
CDE06G1981 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 8.8e-52 208.0 232 46.6
CSS0035944 Camellia sinensis var. sinensis HOM05D004328 ORTHO05D005210 4.2e-46 189.1 201 50.7
GSVIVG01017160001 Vitis vinifera HOM05D004328 ORTHO05D005210 1.3e-39 167.5 96 78.1
HanXRQChr16g0528931 Helianthus annuus HOM05D004328 ORTHO05D005210 2.3e-31 140.2 107 62.6
CANSAT56G0697 Cannabis sativa HOM05D004328 ORTHO05D005210 2.5e-30 136.7 116 57.8
Actinidia15822 Actinidia chinensis HOM05D004328 ORTHO05D005210 1.0e-23 114.8 139 46.0
Sc12g0009110 Simmondsia chinensis HOM05D004328 ORTHO05D387867 6.2e-13 79.0 51 60.8
Zm00001eb029120 Zea mays HOM05D004328 ORTHO05D442189 3.1e-12 76.6 64 57.8


User provided reference genes

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