Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0006380 Sechium edule HOM05D000566 ORTHO05D008456 1.1e-104 383.3 195 100.0
ClCG01G023650 Citrullus lanatus HOM05D000566 ORTHO05D008456 3.4e-80 302.0 197 82.7
MELO3C007220.2 Cucumis melo HOM05D000566 ORTHO05D008456 2.2e-79 299.3 195 81.0
Potri.011G064600 Populus trichocarpa HOM05D000566 ORTHO05D008456 1.4e-62 243.4 188 70.2
Thecc.06G173200 Theobroma cacao HOM05D000566 ORTHO05D008456 1.4e-62 243.4 176 73.3
Gohir.A06G134006 Gossypium hirsutum HOM05D000566 ORTHO05D008456 2.4e-62 242.7 156 79.5
Lalb_Chr16g0384251 Lupinus albus HOM05D000566 ORTHO05D008456 2.4e-62 242.7 179 71.5
Psat7g118880 Pisum sativum HOM05D000566 ORTHO05D008456 3.2e-62 242.3 183 72.1
Haze_06259 Corylus avellana HOM05D000566 ORTHO05D008456 4.1e-62 241.9 196 66.8
Atru.chr10.1700 Acer truncatum HOM05D000566 ORTHO05D008456 5.4e-62 241.5 196 67.3
TWI38G1860 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 5.4e-62 241.5 199 66.8
COL.COLO4_31322 Corchorus olitorius HOM05D000566 ORTHO05D000686 1.2e-61 240.4 155 80.6
Gohir.D06G136400 Gossypium hirsutum HOM05D000566 ORTHO05D008456 1.6e-61 240.0 156 78.2
Sc05g0007190 Simmondsia chinensis HOM05D000566 ORTHO05D008456 2.0e-61 239.6 171 74.3
TAR626G0526 Trochodendron aralioides HOM05D000566 ORTHO05D008456 2.0e-61 239.6 196 67.3
CiPaw.09G068300 Carya illinoinensis HOM05D000566 ORTHO05D008456 3.5e-61 238.8 203 67.5
Ciclev10016472m.g Citrus clementina HOM05D000566 ORTHO05D008456 3.5e-61 238.8 193 68.9
Duzib192G0190 Durio zibethinus HOM05D000566 ORTHO05D008456 4.6e-61 238.4 177 71.8
Gorai.010G158600 Gossypium raimondii HOM05D000566 ORTHO05D008456 4.6e-61 238.4 156 77.6
RcHm_v2.0_Chr5g0010321 Rosa chinensis HOM05D000566 ORTHO05D008456 7.8e-61 237.7 167 74.3
Phvul.003G058300 Phaseolus vulgaris HOM05D000566 ORTHO05D008456 1.0e-60 237.3 180 68.3
Sabra11G0046400 Salix brachista HOM05D000566 ORTHO05D008456 1.3e-60 236.9 195 64.6
FvH4_3g07991 Fragaria vesca HOM05D000566 ORTHO05D008456 1.7e-60 236.5 154 79.9
TPR.G16280 Trifolium pratense HOM05D000566 ORTHO05D008456 1.7e-60 236.5 172 73.3
FAN25G1525 Fragaria x ananassa HOM05D000566 ORTHO05D000686 2.3e-60 236.1 154 79.9
Lalb_Chr05g0218771 Lupinus albus HOM05D000566 ORTHO05D008456 3.0e-60 235.7 157 76.4
FAN11G2813 Fragaria x ananassa HOM05D000566 ORTHO05D008456 3.9e-60 235.3 172 72.7
SGA_v2.0_scaffold1G00030 Striga asiatica HOM05D000566 ORTHO05D008456 5.0e-60 235.0 187 67.9
Lj4g0018718 Lotus japonicus HOM05D000566 ORTHO05D008456 6.6e-60 234.6 178 72.5
Ca_26053_v3 Cicer arietinum L. HOM05D000566 ORTHO05D008456 8.6e-60 234.2 140 83.6
Glyma.13G171000 Glycine max HOM05D000566 ORTHO05D008456 8.6e-60 234.2 141 83.7
Eucgr.E02712 Eucalyptus grandis HOM05D000566 ORTHO05D008456 2.5e-59 232.6 148 80.4
Prupe.4G059300 Prunus persica HOM05D000566 ORTHO05D008456 2.5e-59 232.6 178 69.1
CANSAT35G0195 Cannabis sativa HOM05D000566 ORTHO05D008456 3.3e-59 232.3 155 78.7
Manes.16G037200 Manihot esculenta HOM05D000566 ORTHO05D008456 3.3e-59 232.3 155 78.1
unitig_699.g19342 Utricularia gibba HOM05D000566 ORTHO05D008456 3.3e-59 232.3 143 80.4
VMungo0251G1655 Vigna mungo HOM05D000566 ORTHO05D008456 3.3e-59 232.3 185 65.4
FAN21G0306 Fragaria x ananassa HOM05D000566 ORTHO05D008456 4.3e-59 231.9 202 64.4
QL05p046292 Quercus lobata HOM05D000566 ORTHO05D008456 7.3e-59 231.1 196 65.3
C07p16640 Brassica napus HOM05D000566 ORTHO05D008456 9.5e-59 230.7 198 62.6
BcaC06g35392 Brassica carinata HOM05D000566 ORTHO05D008456 1.6e-58 229.9 196 62.8
BcaB03g13911 Brassica carinata HOM05D000566 ORTHO05D008456 2.1e-58 229.6 183 67.8
MD10G1282600 Malus domestica HOM05D000566 ORTHO05D008456 2.1e-58 229.6 154 74.7
SalBow8G0706 Salvia bowleyana HOM05D000566 ORTHO05D008456 2.8e-58 229.2 166 73.5
BolC7t42164H Brassica oleracea HOM05D000566 ORTHO05D008456 3.6e-58 228.8 196 62.2
PGR042G3563 Punica granatum HOM05D000566 ORTHO05D008456 3.6e-58 228.8 154 76.0
CARHR028250 Cardamine hirsuta HOM05D000566 ORTHO05D008456 4.7e-58 228.4 197 62.9
THA.LOC104814247 Tarenaya hassleriana HOM05D000566 ORTHO05D008456 4.7e-58 228.4 155 75.5
Cfa000591 Carpinus fangiana HOM05D000566 ORTHO05D008456 8.0e-58 227.6 192 66.1
Dinv04627 Davidia involucrata HOM05D000566 ORTHO05D008456 1.1e-57 227.3 149 77.9
Hund23960 Selenicereus undatus HOM05D000566 ORTHO05D008456 1.1e-57 227.3 158 75.9
Aqoxy1G03201 Aquilegia oxysepala HOM05D000566 ORTHO05D008456 2.3e-57 226.1 125 87.2
A07p11000 Brassica napus HOM05D000566 ORTHO05D008456 2.3e-57 226.1 198 63.1
BraA07t28892Z Brassica rapa HOM05D000566 ORTHO05D008456 2.3e-57 226.1 198 63.1
Migut.M01050 Erythranthe guttata HOM05D000566 ORTHO05D008456 3.1e-57 225.7 151 77.5
Medtr4g087740 Medicago truncatula HOM05D000566 ORTHO05D008456 4.0e-57 225.3 137 81.8
GSVIVG01021190001 Vitis vinifera HOM05D000566 ORTHO05D008456 4.0e-57 225.3 122 90.2
MSTRG.7396 Avicennia marina HOM05D000566 ORTHO05D008456 5.2e-57 224.9 143 79.0
Carub.0001s2723 Capsella rubella HOM05D000566 ORTHO05D008456 5.2e-57 224.9 135 81.5
Sp1g24970 Schrenkiella parvula HOM05D000566 ORTHO05D008456 5.2e-57 224.9 152 75.7
AT1G29040 Arabidopsis thaliana HOM05D000566 ORTHO05D008456 8.9e-57 224.2 192 62.5
Medtr4g087750 Medicago truncatula HOM05D000566 ORTHO05D008456 1.2e-56 223.8 156 76.9
Thhalv10009067m.g Eutrema salsugineum HOM05D000566 ORTHO05D008456 1.5e-56 223.4 131 83.2
AUR62036584 Chenopodium quinoa HOM05D000566 ORTHO05D008456 2.0e-56 223.0 120 90.8
Peaxi162Scf01479g00012 Petunia axillaris HOM05D000566 ORTHO05D008456 2.0e-56 223.0 154 73.4
Ah.09g233690 Amaranthus hybridus HOM05D000566 ORTHO05D008456 2.6e-56 222.6 169 71.0
Zm00001eb162000 Zea mays HOM05D000566 ORTHO05D008456 3.4e-56 222.2 186 64.0
Cc02_g14640 Coffea canephora HOM05D000566 ORTHO05D008456 4.4e-56 221.9 122 88.5
PSO675G8854 Papaver somniferum HOM05D000566 ORTHO05D008456 5.8e-56 221.5 142 78.2
CsaV3_6G050800 Cucumis sativus L. HOM05D000566 ORTHO05D008456 9.8e-56 220.7 152 78.3
PSO541G3700 Papaver somniferum HOM05D000566 ORTHO05D008456 1.3e-55 220.3 147 75.5
Oeu039926.1 Olea europaea HOM05D000566 ORTHO05D008456 1.7e-55 219.9 140 79.3
Actinidia16807 Actinidia chinensis HOM05D000566 ORTHO05D008456 2.9e-55 219.2 122 87.7
AL1G42750 Arabidopsis lyrata HOM05D000566 ORTHO05D008456 4.9e-55 218.4 131 80.9
Hma1.2p1_0437F.1_g152980 Hydrangea macrophylla HOM05D000566 ORTHO05D008456 6.4e-55 218.0 174 67.2
Rhsim13G0191700 Rhododendron simsii HOM05D000566 ORTHO05D000686 6.4e-55 218.0 168 69.0
CAN.G337.143 Capsicum annuum HOM05D000566 ORTHO05D008456 8.3e-55 217.6 122 85.2
Lsat_1_v5_gn_4_50020 Lactuca sativa HOM05D000566 ORTHO05D008456 8.3e-55 217.6 161 71.4
PGSC0003DMG401022314 Solanum tuberosum HOM05D000566 ORTHO05D008456 1.1e-54 217.2 122 86.1
DCAR_004017 Daucus carota HOM05D000566 ORTHO05D008456 1.9e-54 216.5 150 71.3
ECA234G0195 Erigeron canadensis HOM05D000566 ORTHO05D000686 1.9e-54 216.5 167 66.5
vmacro03936 Vaccinium macrocarpon HOM05D000566 ORTHO05D008456 2.4e-54 216.1 146 77.4
MBI06_g25985_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 3.2e-54 215.7 149 71.8
CDE02G2902 Ceratophyllum demersum HOM05D000566 ORTHO05D008456 7.0e-54 214.5 136 78.7
HanXRQChr07g0186931 Helianthus annuus HOM05D000566 ORTHO05D008456 7.0e-54 214.5 146 74.7
Sopen07g032890 Solanum pennellii HOM05D000566 ORTHO05D008456 1.6e-53 213.4 122 84.4
Solyc07g064690.1 Solanum lycopersicum HOM05D000566 ORTHO05D008456 2.0e-53 213.0 122 84.4
EL10Ac8g20507 Beta vulgaris HOM05D000566 ORTHO05D008456 1.7e-52 209.9 194 62.4
Lj2A297T108 Lonicera japonica HOM05D000566 ORTHO05D008456 1.7e-52 209.9 224 53.6
HPP92_024140 Vanilla planifolia HOM05D000566 ORTHO05D008456 8.6e-52 207.6 122 82.8
Os01g0613300 Oryza sativa ssp. japonica HOM05D000566 ORTHO05D008456 1.1e-51 207.2 168 64.9
Nitab4.5_0000206g0050 Nicotiana tabacum HOM05D000566 ORTHO05D008456 4.7e-50 201.8 159 67.9
Pp3c23_18520 Physcomitrium patens HOM05D000566 ORTHO05D008456 4.7e-50 201.8 136 70.6
Peaxi162Scf01070g00226 Petunia axillaris HOM05D000566 ORTHO05D008456 3.1e-49 199.1 205 55.1
Pp3c24_14610 Physcomitrium patens HOM05D000566 ORTHO05D008456 3.1e-49 199.1 173 57.2
Aa31LG6G11510 Aethionema arabicum HOM05D000566 ORTHO05D008456 4.4e-48 195.3 194 57.7
ATR0602G168 Amborella trichopoda HOM05D000566 ORTHO05D008456 9.9e-48 194.1 202 55.4
Glyma.13G170900 Glycine max HOM05D000566 ORTHO05D008456 3.7e-47 192.2 122 75.4
VMungo0251G1536 Vigna mungo HOM05D000566 ORTHO05D008456 1.4e-46 190.3 122 73.8
AUR62031167 Chenopodium quinoa HOM05D000566 ORTHO05D008456 3.9e-44 182.2 99 90.9
SEGI_28108 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 6.6e-44 181.4 123 67.5
Glyma.04G136400 Glycine max HOM05D000566 ORTHO05D008456 1.9e-43 179.9 122 70.5
arahy.Tifrunner.gnm1.ann1.AZL87G Arachis hypogaea HOM05D000566 ORTHO05D008456 1.1e-41 174.1 129 64.3
arahy.Tifrunner.gnm1.ann1.441UHN Arachis hypogaea HOM05D000566 ORTHO05D008456 2.4e-41 172.9 129 63.6
AagrBONN_evm.TU.Sc2ySwM_344.3192 Anthoceros agrestis HOM05D000566 ORTHO05D008456 3.5e-37 159.1 106 69.8
Cpa.g.sc7.62 Carica papaya HOM05D000566 ORTHO05D008456 2.3e-36 156.4 152 59.2
Nn1g04373 Nelumbo nucifera HOM05D000566 ORTHO05D008456 4.7e-34 148.7 146 59.6
FAN16G3553 Fragaria x ananassa HOM05D000566 ORTHO05D008456 3.4e-32 142.5 104 75.0
Nitab4.5_0010317g0010 Nicotiana tabacum HOM05D000566 ORTHO05D008456 3.8e-31 139.0 236 42.4
MCO02G300 Micromonas commoda HOM05D000566 ORTHO05D008456 1.6e-26 123.6 142 49.3
TWI38G1453 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 6.4e-23 111.7 67 82.1
PRCOL_00004523 Prasinoderma coloniale HOM05D000566 ORTHO05D008456 1.0e-20 104.4 121 47.9
TWI38G2220 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 6.7e-20 101.7 153 47.1
Glyma.04G136500 Glycine max HOM05D000566 ORTHO05D008456 1.6e-18 97.1 71 66.2
CSS0045665 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 9.9e-16 87.8 45 88.9
SEGI_18524 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 8.4e-15 84.7 67 68.7
Sed0003601 Sechium edule HOM05D000566 ORTHO05D008456 1.9e-14 83.6 114 46.5
SEGI_06418 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 1.9e-14 83.6 115 47.0
CSS0020746 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 4.6e-13 79.0 132 47.7
CSS0029795 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 4.6e-13 79.0 132 47.7
Cpa.g.sc7.61 Carica papaya HOM05D000566 ORTHO05D008456 1.9e-11 73.6 37 89.2
MBI06_g25984_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 6.5e-07 58.5 52 57.7
SEGI_34869 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 6.5e-07 58.5 42 61.9


User provided reference genes

Program Settings